Salvelinus fontinalis (brook trout): 129862175
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Entry
129862175 CDS
T11136
Name
(RefSeq) paired box protein Pax-6-like isoform X1
KO
K08031
paired box protein 6
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129862175
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
129862175
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GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
129862175
NCBI-ProteinID:
XP_055789549
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Position
9:16800952..16820892
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AA seq
467 aa
AA seq
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MPQKEYYNRATWESGVASMMQNKVYDYNEGHSGVNQLGGVFVNGRPLPDTTRQKIVELAH
SGARPCDISRILQTHGDAKVQVLDNENVSNGCVSKILGRYYETGSIRPRAIGGSKPRVAT
PEVVGKIAVYKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSLSVSSINRVLRNLASEKQ
QMGADGMYEKLRMLNGQTGTWGTRPGWYPGTSVPGQPNPDGCPQSDGGGENTNSISSNGE
DSDETQMRLQLKRKLQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQ
VWFSNRRAKWRREEKLRNQRRQASNSSSHIPISSSFSTSVYQPIPQTTAPGWMSFSSGSM
LGRPDTALTNTYNALPPMPSFTMANNLPMQAPVSSQTSYSCMLPTSPSVNGRSYDTYTPP
HMQAHMNSQSMAGSGGNSTGLISPGVSVPVQVPGSEADMSQYWPRLQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaaaagaatactataaccgggccacgtgggaatctggcgtcgcgtccatgatg
caaaacaaggtgtatgactataacgaaggtcacagcggagtgaatcagcttggcggagtg
ttcgtcaacggcagacccctgcccgacaccaccagacagaaaatagtcgagcttgctcac
agtggcgcgcggccgtgcgatatatccaggattctgcagacccatggtgatgcaaaagtt
caagtgctggacaatgaaaacgtgtcaaacggctgtgtgagtaagattctgggcagatac
tatgaaaccggctccatcagaccaagggcgatcgggggtagcaaaccaagagtagcaact
cccgaggtggtcggaaaaattgcagtatacaagagggagtgcccttcaatcttcgcctgg
gaaattcgtgacagactgctatccgagggggtctgcacaaacgataatatacccagtgta
agttcattgagtgtgtcgtcgataaacagagtactgcgcaacctggctagcgagaagcaa
cagatgggcgcagatggcatgtatgagaagttgagaatgctgaacggtcagactgggacg
tgggggacccggccaggctggtaccccggaacctcagtgccaggacagcccaacccagat
ggttgtccacagtcagacggtggaggtgagaacactaattcaataagttcgaatggagaa
gactcggatgagacccaaatgagacttcagctcaaaagaaaactgcaaaggaaccgcact
tcgttcacacaagaacagatagaagcgcttgagaaagagtttgaaagaactcactatcca
gatgttttcgcaagggaaagacttgctgcaaaaattgacctcccagaggccagaatacag
gtgtggttttcaaataggagggcaaagtggaggagggaggagaaactccggaatcaaagg
cgacaagccagtaactcctccagtcacatccctatcagcagcagtttcagcaccagtgtc
taccagcccatcccacagaccacagcaccaggttggatgtcgttctcctcaggatccatg
ttgggaagaccagacacagcccttacaaacacatacaatgccctgccacctatgccaagc
ttcaccatggccaacaacctgcctatgcaagcccctgtgtccagccagacctcctactcc
tgcatgctgcccaccagtccctcagtcaacggacggagctacgacacgtacacccctcct
catatgcaggcacatatgaacagccaatcaatggctggttcaggtggcaactcaacaggt
ctcatctctcctggagtatctgttcctgttcaagtcccaggcagtgaagcagacatgtcc
cagtactggcccaggctacagtaa
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