Salvelinus fontinalis (brook trout): 129862303
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Entry
129862303 CDS
T11136
Name
(RefSeq) protein NEDD1-like isoform X1
KO
K16547
protein NEDD1
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129862303
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129862303
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
129862303
Microtubules and associated factors
gamma-tubulin ring complex
129862303
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
129862303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
WDR90_beta-prop_4th
NBCH_WD40
eIF2A
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_IFT122_1st
WD40_like
KNTC1_N
Frtz
SdiA-regulated
Cytochrom_D1
Ge1_WD40
TNRC6-PABC_bdg
Motif
Other DBs
NCBI-GeneID:
129862303
NCBI-ProteinID:
XP_055789781
LinkDB
All DBs
Position
9:24137385..24160307
Genome browser
AA seq
724 aa
AA seq
DB search
MICRSYGRSNSCQSFCFLNCRTISQSITTVTMEEVTRLVSSGDCVKIWDSASMTVLEQFN
PHSATHPVAQVCWSSNNQYLVSASSIGDKLVVSSLKSSPIPVVELAEGKNQTRVSLNSTS
QYLVSGGLDNSVNIWDLKAKRLHRTLKDHNEEVTCVSFNGSDSYIASGSTSGDIILHSIT
TNLSSKAFGHGTNQPIHDLKYSVVKRSLLGSVSDSGSVVLWDANTQKELHEFDGAHKAPA
SGLAFSPANDLLFVTVGLDKKIICYDTSSKIVLRSMRVESPLTAIDFTPDGAGLVVGSTQ
GRLYLYDLRNLSAPTKTATAHKTSITSLRFQSSQSRHLKSSKMASSKSSSSHTSKRISAR
LGNTYLPAATHSSTSTPPSSLLAPHMVDGWDGQAQGTGSSVEVVSREAEGQPGADRLPSL
DKFSSVGRNSLDIFSPVRDDYKAHGMGGDAPGGIKGNGTSLDMFSREGEGQNSTEKFSKV
GRNSLDIFSPVREDYKSHGMTADVSSGKKGNNLDFLPSYSGGPPHRKTPLGTPGGGRCYS
PLSVFQTPQPIKEEDAEPPAQTDTLDLKRYEKGEGPTPHSQPAQLFFTPEPSLRAANDMQ
AQLRYNTPLNGGPHTTAPAGPAVSSVVASSVSERIVEAVGAEGGGAPLTSLQIQFVRNMI
HETLEDFRDACHRDIVNLQVEMVKQFYIQLNEIHGLVEKYSVNDTLVEEIEKLREENKRL
RANY
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatatgccgtagttacgggcgctcaaactcttgtcaaagtttttgttttctaaattgt
aggacaatttcacaatcaattacaaccgttaccatggaggaggtgacgcgcctggtatca
tcaggcgactgtgtgaagatctgggactcagcctccatgacagtgttagaacagttcaac
ccacatagcgctacacaccctgtggcccaagtgtgctggagcagcaacaatcagtatctt
gtaagcgccagcagtataggagacaagctggtggtatccagtctcaagtcctctcctatc
ccagtggtggaacttgcagaggggaaaaatcagacccgcgtgagtctgaactcgacgtcc
cagtacttagtcagtggggggcttgataactccgtcaacatctgggatctgaaggccaag
aggcttcatcgcaccctcaaggaccacaatgaagaggtgacgtgtgtgtcctttaatggt
agtgacagctacatcgcatcaggctccaccagtggtgacatcatcctgcacagcatcacc
accaacctgtctagtaaggcctttggacacggcaccaaccagcctatccacgacctgaag
tactctgtggtgaagcgctccctgctgggcagtgtgtcagatagtggctctgtggtcctg
tgggacgccaacactcagaaagagctgcatgaatttgatggagcccacaaggcccccgcc
tcgggcctggccttctccccagccaatgacctgctctttgtcaccgtgggcctggacaag
aagatcatctgctacgacacctccagcaagattgttctccgcagcatgcgtgtggagtcc
ccattgaccgccattgacttcactccagatggggcaggcctggtggtgggctccacccag
ggcagactgtacctgtacgacctgcgcaacctcagcgctcccaccaagactgccaccgca
cacaagacctccatcaccagcctgcgcttccagagctcccagagcagacacctcaagtcc
agtaaaatggcatccagcaagtcttctagctctcacacaagcaagaggatctcagccagg
ctgggtaatacctacttaccagcagccacccacagctccacctctacacccccctctagc
ctgcttgcaccccacatggtagatggatgggatggacaggcacagggcacaggctccagt
gtggaagtggtctccagagaggcggagggccagccgggtgctgaccgcctgcccagtctg
gacaagttcagtagcgtgggtagaaacagcctggacatcttctcccccgtaagagacgat
tacaaagcccatgggatgggcggtgatgctcctggtggaatcaaagggaatgggaccagt
ttggatatgttctccagagaaggagaagggcaaaacagcacggagaagttcagcaaagtg
ggacgcaatagtctggacattttctctccagtcagagaggattacaaatcccatggaatg
accgcagatgtatcaagtgggaagaaaggaaacaatctggacttcctcccttcctactct
ggtggacccccacaccgcaagactcccctgggcacacctggaggagggcgctgttacagc
cccctgtctgtcttccagacccctcaaccaatcaaagaggaggatgccgagccgccagcg
cagacagacacactggatttgaaacggtatgagaagggtgaaggccccaccccacacagc
caaccagcacagctgttcttcacccctgaacccagcctgagggcggccaatgacatgcag
gcccaactgcgctacaacacacccctcaatggtggtccgcacactactgcaccagcaggc
cctgcagtttcttcagtggtagcatcctctgtatcagagagaatagtggaggctgttgga
gcagagggtggaggcgctcccctcacatcactgcagatccagttcgttcgcaacatgatc
cacgagaccctggaagacttcagggacgcctgccaccgagacatagtgaacctccaggtg
gagatggtcaaacagttctacattcagctgaatgagatccatggtctggtcgagaagtac
tcggtcaacgacacgctggtagaggagatcgagaagctgagggaggagaacaaacgactc
cgagccaattactga
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