Salvelinus fontinalis (brook trout): 129862329
Help
Entry
129862329 CDS
T11136
Name
(RefSeq) class E basic helix-loop-helix protein 41-like
KO
K03730
class B basic helix-loop-helix protein 3
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129862329
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
129862329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
129862329
NCBI-ProteinID:
XP_055789825
LinkDB
All DBs
Position
9:complement(25446534..25450836)
Genome browser
AA seq
431 aa
AA seq
DB search
MDEKIPRLQDRQFMDHADFLGVEYSSLYMCKSKRGLKREDGKDAYKLPHRLIEKKRRDRI
NECIGQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLNALTAVTEQQHQKIMAFQNGDLLM
KMPIRADLDAFHSGFQACAKEVLQYLNKLENWNTCEQRCAQLISHLHKVSAQFQPEPLLH
PQLPVRDALDRDGQKPDSQAGHDRVSVIQRSHGELNENDTDTDSGYGGEAEKNDGKKGCD
RSKLQGPKAVKIKQEFEDDRSAKKTKMNWAGNCTTSADATTRPDLVFMNSLMGITGVGQQ
TPFCMPFYFINPSAAASYMPLFDKSNLEKFVFPAAAATTISSQFHWLYPGLNSHASAAAA
ATAGVFSRMSTEKISGFGSDSKDSPSDDSDMSNVVEPGSPDEREDNLENDDDDDYDKELG
DDSPDNENDST
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaaataccgcgtctgcaggacaggcaatttatggatcatgctgatttctta
ggggtggaatactcctcactctacatgtgtaaatcgaaaagagggctgaagcgcgaagat
ggcaaggacgcgtacaagttaccacaccgattgatagagaagaagaggagagacagaatc
aatgagtgtatcggacagttaaaggatttgttacccgaacatctcaaactgacgacgctc
gggcatttggagaaagcagttgttcttgagttaactttgaagcatttaaacgctttgact
gcagtcactgagcagcagcaccagaagattatggcttttcagaatggggatctattgatg
aaaatgcccattcgcgctgatttggatgcgttccactcggggttccaagcgtgtgccaaa
gaggtcctgcagtacctaaacaagttggagaactggaatacatgcgagcagcggtgcgcg
cagctcatcagccacttgcacaaagtctcggcgcagtttcagcctgagccactgctccat
ccccagctacctgtcagagacgcgctcgaccgcgatggccaaaaaccagacagccaagcc
ggacatgaccgcgtatcagtcatacagaggagccatggagagcttaacgagaatgacaca
gacacagacagtggatacgggggtgaggcggaaaagaatgatgggaagaaaggatgtgac
cggagcaaactgcaggggcccaaggcagtaaagataaagcaggagttcgaggatgaccgc
tctgccaaaaaaacaaagatgaactgggctggaaactgcactacaagcgcagacgcgacc
accagacctgatctggtctttatgaattcgttgatgggaataactggcgtgggacagcag
actcccttttgcatgcccttttacttcataaacccctcggcggcagcgtcctacatgcct
ctatttgacaaaagtaacctggagaagtttgtgttcccagctgcagcagcgacgacgatc
tcatctcagtttcactggttataccccggcctcaactcacatgcgtcggcagctgcggcc
gcaacagccggtgttttttcccgcatgtcgacagagaagatctctggattcggttccgac
tccaaggactctccctccgacgacagtgacatgtcaaacgtggtggagccgggctcacct
gatgagagggaggacaatcttgagaatgatgacgatgatgattatgataaggaattaggg
gatgactccccagacaatgaaaatgacagtacataa
DBGET
integrated database retrieval system
