Salvelinus fontinalis (brook trout): 129862344
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Entry
129862344 CDS
T11136
Name
(RefSeq) transcription factor RFX4-like isoform X1
KO
K09174
regulatory factor X 4
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129862344
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Other basic domains
RF-X
129862344
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Clr5
Motif
Other DBs
NCBI-GeneID:
129862344
NCBI-ProteinID:
XP_055789853
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Position
9:complement(26109053..26145776)
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNESESKRYSSHTSLGNTSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKHDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVIKQTVAYSPRSKLGTLLPE
FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQVLKRQTSLNHLCQASRTVIHSADITFQMMEDWRNVDLNSITK
QTLYTMEDTWEEHRRLIINLYQEFDRLLEEQSPIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRAMKAEGSTAEQEEEMMLTETTPTSTSPGPFSPPKSVTSVGVPAASSPTAAQSPEYTGA
TATTGAVQSYTWSLTYTVTTSGGTPPEGGQQQPCMRSGAPVPPPSSTHRLPVYAHRDEHG
FTGSYNYGSYSNQHPHSIQSQYPSLAHEPGIPAPLHYPAYHRTSAQYPLNSQMSRMEPCL
MGGAPRLHPTPVAPRWADVSPANSCYTSPPMHSSRYAASGDMYSPLAPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgcctcaacgagagcgagagcaagcggtattccagtcacacgtccctggggaatacgtcc
aatgacgaaaatgaggagaaagaaaacaacagggcttctaaaccccattcaacaccagct
accctacaatggctggaggagaactatgagattgcagaaggggtttgtatcccccgcagt
gctctctatatgcactacctggacttttgtgagaagcacgacacacagcctgtcaacgcc
gccagctttgggaagattattagacaacagtttccacaactgaccacaagaagactgggc
accaggggccagtcaaaataccactactatggtatcgctgtgaaggagagctcccagtac
tacgatgtgatgtactccaagaagggggcggcgtgggtgaacgaaacaggcaagaaggag
gtcatcaagcagacagtggcgtattcaccacgctccaaactggggacgctcctgccagag
tttccaaatgtcaaagacttaaatctgcccgccagtctgccagaggagaaggtgtcaacg
ttcatcatgatgtacagaactcactgccagaggatactggacacagtaatacgcgccaac
tttgatgaggtccagagcttcctgctgcacttttggcagggcatgcccccgcacatgctc
cctgtcctcggctcctccactgtggtcaacatcgtgggcgtctgtgactccattctttac
aaggccatctctggggttcttatgcccaccgtcctgcaagcactgcctgatagtttgacc
caggtgatccggaagtttgccaaacagctggatgagtggcttaaagtagcacttcacgac
ctgcctgaaaacctgaggaatatcaaatttgaattatctagaagattttctcaagttctc
aagaggcagacatctttgaaccatctatgtcaggcgtcacggacggtgatccacagtgca
gacatcacctttcagatgatggaggactggcggaacgtggacctgaacagcatcaccaag
cagacactttacaccatggaggacacatgggaggagcaccggcggctcatcatcaacttg
taccaggagtttgaccgtctgttggaggagcagtctcctatagaggcctacatcgagtgg
ctggactccatggtggaccgctgtgttgtcaaggtggcaggaaagaggcccgggtgcctg
aagaaggtggcccaacagttcctgctcatgtggtcgtgcttcgggacccgagtcatccgg
gatatgaccctccacagtgcgcctagcttcggctcgttccacctgatccacctgatgttt
gatgactatgtgttgtacctgctggagtccctgcactgccaggagagggccaacgagctc
atgagggccatgaaggcagagggcagcacagccgaacaagaggaagagatgatgctgaca
gagaccacgcccacctccacgtccccagggccattttccccaccgaagtctgtcacctca
gttggggttccagccgcaagctcccccaccgctgcccagtccccagagtacacaggggcc
acagccacaacaggcgctgttcagtcatatacctggtcccttacgtacacagtgacaacg
tcaggcggcactcctcccgagggcggacagcagcagccctgcatgcgcagcggtgcaccc
gtgccccctccctcctccacccatcgactgccagtctacgcccacagggacgagcacggg
tttactgggagctataactacgggagctactctaaccagcacccccactccatccagagc
cagtaccccagtctggcccacgaaccaggcatccctgcccccctccactatcccgcctac
caccgcacctctgcacagtacccgctcaatagccagatgtctcggatggagccatgcttg
atgggaggtgctcctcggctgcaccctacgcctgtggccccacggtgggcggatgtctcc
ccagccaacagctgttacaccagtccccctatgcactcctcccgctacgccgcctctgga
gacatgtactcccccctggcccctcgcaggaactctgagtacgaacactcacaacacttt
cccggcttcgcttacatcaatggagaggccaccacaggctgggccaagtag
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