Salvelinus fontinalis (brook trout): 129862508
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Entry
129862508 CDS
T11136
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129862508
03036 Chromosome and associated proteins [BR:
sfon03036
]
129862508
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129862508
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129862508
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
Roughex
zf-C2H2_REST
Zf-C2H2_ZNF451
zf-met
zf-C2HE
zf-C2H2_6
Teflon_C
Zf-C2H2_ZNF451_C
zf-C2H2_15
zf-C2H2_ZN142
zf-C2H2_CASZ1
DUF8106
Zn_ribbon_DUF2089
Motif
Other DBs
NCBI-GeneID:
129862508
NCBI-ProteinID:
XP_055790229
LinkDB
All DBs
Position
9:36763680..36783316
Genome browser
AA seq
803 aa
AA seq
DB search
MKYSFLVQVLPMDGGPTDVVVEAKDFITYEGEEVVADLLQQAAEGVMDQQPEGVAGLDTQ
QLVEGVNVEMMVIDSLDPALMQMKTEVMDAPVATAHEATVTTVDETQIITLQVVNMDEQQ
LGGLGELQLVQVPVSAVPVTQATVEALQGTFVDTTAMPKDGNPVICHTLPLPEGFQVVKV
GANGEVETVEQGELQHQEEQQVQPEEEEEELHCEPQPEEPQWAKDPDYQPPAKKTIKKAK
KSNLRYNTEGDKDNMDVSVYDFEEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTF
QCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCQD
CDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSY
ASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVI
ARKSDLGVHLRKQHSFIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYCCRQ
ERHMLMHRRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTAFVCTKCGKAFTR
RNTMARHAENCNGDPSEGENGSPPKRGRGGRKRKMRSRKDDDDDDDDDDDDDDDSEDNAD
PELDDIDEEDEAEAALLEEEEEMELEQAPPTKPIPAPVEPPVKRKRGRPPKNIPKPSPPA
KASKAAPKGKAAAAAVIIQVEDENTGAIENIIVKKEPEVEQAAPEVVVEQPEEAGVETVE
LPVADAAPNGDLTPEMILSMMDR
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcctttctagtgcaggtgttaccaatggacggaggaccaacagatgttgtg
gttgaggccaaggacttcatcacctatgaaggggaggaggtggtggcagacctgctccag
caagcagcagagggggtgatggaccagcagccagagggagttgctggtctggatacccag
cagctggtggagggagtcaatgtggagatgatggtaatagactccctggacccggccctg
atgcagatgaagactgaggtgatggatgcccctgtggctacagcccacgaggccacggtc
accacggtggatgagacccagatcatcactctgcaggttgtcaacatggatgagcagcag
ctgggaggcctcggggagctacagctggtccaggtccctgtctctgctgtccctgtcacc
caggccactgtagaggcgctacagggcaccttcgtggacaccacggccatgcccaaagat
ggaaaccctgttatctgccacaccctgcccctgccagagggattccaggtggtgaaggtt
ggtgcgaatggtgaggtggagacagtggagcagggtgagctccagcaccaggaggagcag
caggtccagcctgaggaggaggaggaggagctgcactgtgagccccagcctgaagaacca
caatgggccaaggaccctgactaccagcccccagccaagaagaccatcaagaaggcaaaa
aagagcaatctgcgctacaacacagagggggataaagacaacatggacgtgtctgtgtac
gattttgaggaggagcagcaggaagggatgctctctgaggtcaacgcagagaaggtggtg
ggcaacatgaaaccccccaaacctaccaaaattaagaagaagggtgtgaagaaaacattc
cagtgtgagctgtgtagctacacctgtccccgccgctccaacctcgaccgacacatgaaa
agccacacagatgagaggccccacaagtgccatctgtgtggaagggccttcaggaccgtt
accctgctgaggaaccacctcaacacacacacaggtaccagaccacacaagtgtcaagat
tgtgacatggcctttgtgaccagtggagagctggtccgacatcgtcgctacaagcacact
catgagaaacccttcaagtgctccatgtgtgactatgccagtgtagaggtgagcaagcta
aagcggcacatccgttcccacactggggagcgtccgttccagtgcagtctgtgcagctac
gccagcagagacacctacaagctgaagagacacatgaggacacactcgggagagaagcca
tacgagtgctatatttgccacgcccgtttcacccagagtggaaccatgaagatgcacatc
ctgcagaagcacacagagaacgtggccaagttccactgcccccactgtgacacagtcatc
gcccgaaagagtgacctgggcgtccacctgcgaaaacagcactcgttcattgagcagggc
aggaaatgtcgttactgcgatgctgtgttccacgagcgctacgcactcatccagcaccag
aagtcccacaagaacgagaaacgcttcaagtgtgaccagtgtgattactgctgcagacag
gagcgccacatgctgatgcacaggcgcacccacacaggagagaagccttacgcctgtagc
cagtgtgagaagaccttccgtcagaagcagctcctggacatgcacttccggcgctaccat
gaccccaactttgtgcccaccgcctttgtgtgcaccaagtgtggcaaggccttcacccgc
aggaacaccatggccagacatgcagagaactgtaacggggatcctagtgaaggagagaac
ggatccccacccaagagaggacgaggtgggaggaagaggaagatgcgctcaaggaaggac
gacgatgatgatgatgatgatgatgatgatgacgatgacgacagtgaggacaatgctgat
cctgagctggatgacattgatgaagaggatgaggctgaagcagcactgttggaggaagag
gaggagatggagttggagcaggctccacccaccaaacctattcctgctcctgtagagcca
cctgtcaagaggaaacgcggcagacctcccaagaacatccccaaaccctccccacccgcc
aaagccagcaaggctgcccccaaaggcaaggctgctgcagctgcagtcatcattcaggtg
gaggatgagaataccggcgctatagagaacatcatagtgaagaaggagccagaggttgaa
caggctgccccagaggtggtggtggagcagccagaggaggcaggggtggagacggtggag
ctgcctgtagcagacgctgcccccaacggagacctcacccctgagatgatcctcagcatg
atggaccggtga
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integrated database retrieval system
