Salvelinus fontinalis (brook trout): 129862543
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Entry
129862543 CDS
T11136
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04115
p53 signaling pathway
sfon04120
Ubiquitin mediated proteolysis
sfon04137
Mitophagy - animal
sfon04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129862543 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129862543 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129862543 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
129862543 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129862543 (siah1)
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129862543 (siah1)
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
129862543 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
TerY_C
Motif
Other DBs
NCBI-GeneID:
129862543
NCBI-ProteinID:
XP_055790287
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All DBs
Position
9:complement(37855440..37873410)
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AA seq
335 aa
AA seq
DB search
MSGRANVQPMNSWKGVLKLFTCIASRTTANKPKELPTFQEKKKALFRNLMDEEMSRQTAT
ALPTGTSKCAPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRP
KLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYS
CPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGF
HFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGI
ATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagagctaatgttcagcccatgaactcatggaagggggtgctcaagctcttc
acatgcatagcttctagaacaaccgccaacaaacctaaagagttacccacatttcaagag
aagaagaaagccttatttaggaatcttatggacgaagaaatgagtcgccagaccgccaca
gcgctgcccacaggaacctccaagtgtgccccctcccagcgcgtccccaccttgtccggc
actacggcctctaacagcgacctggccagcctgtttgagtgccccgtctgcttcgactat
gtgctgccccctatcctgcagtgccagagcggccacctggtctgcagcaactgccgaccc
aagctcacctgctgccccacctgccggggcccactgggctccatcaggaacctggccatg
gagaaggtggccaactctgtgctgtttccctgcaagtatgcgtcgtcgggctgcgaggtg
acgctgccccacacagacaaggcagagcacgaggagctgtgtgagttccggccgtactcc
tgcccctgcccaggggcctcctgtaagtggcagggctcgttggacgcggtcatgccccac
ctcatgcaccagcacaaatccatcaccacgctgcagggcgaggacatcgtgttccttgcc
acggacattaacctgcctggggcagtggactgggtcatgatgcaatcctgcttcggattc
cacttcatgctggtcctggagaagcaggagaagtacgacggtcaccagcaattctttgcc
atcgtgcagctgatcggcacgcggaagcaggctgaaaactttgcctaccgcctggagctc
aacgggcaccggcgacggctcacctgggaggccacgccccgctccatccacgagggcatc
gccactgccattatgaacagcgactgcctagtgtttgacacctccatcgcgcagctgttc
gctgagaatggaaacctgggcatcaacgtcaccatatccatgtgctga
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