Salvelinus fontinalis (brook trout): 129862691
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Entry
129862691 CDS
T11136
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RFWD3-like
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129862691
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129862691
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129862691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_THOC3
WDR55
zf-RING_5
Beta-prop_EML_2
zf-C3HC4_3
EIF3I
zf-rbx1
zf-C3HC4_2
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40
zf-RING_11
zf-RING_Vps41
Beta-prop_WDR75_1st
zf-C3HC4_4
zf-ANAPC11
WD40_Prp19
WD40_WDHD1_1st
CFAP43_N
Beta-prop_EML
WD40_2
Beta-prop_RIG_2nd
Rtf2
Zn_ribbon_TiaS
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
zf-UDP
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
129862691
NCBI-ProteinID:
XP_055790559
LinkDB
All DBs
Position
9:45509456..45527352
Genome browser
AA seq
750 aa
AA seq
DB search
MVQRWQEHWNRDTKGRHVFILGCEMEVMEAMEVDLQLGGPSREPEPDVVADQVDLPIVIP
DSGSETEDEADAAPCDPPRLPNTWAFSQNRARVEGQVGSRIRREGHIEPTGFPNLFHPML
YPLIVPVLFLCGXRPGLREHYSTQTAALASSFLDFLLRVPAANQAEGDSGSTTELSESED
EADPLGPAADPPNSAVPSSPRPNPPVTPPEGLYSSDSNATTEAARTVTGNQVNPEVVSDP
LASSEPALRLSQGDEGEGETCSICFEPWTTSGEHQLATLRCGHLFGYTCIDRWVKGQGQG
AKCPQCNKKAKRTDIVLLYACKLRALDNTEQESMKRSLEQEHSLRRKADLESAQCRLQLQ
VVTDECGKLHKQLQELKTLMAQPGCGPSQSSGAYLSGPFQRQDSTQGGHYVFSKAVLVSQ
VGGCRVLSYCEPLSCLLASQPSPHTTLVPGCGVKKVSTVNLKACQYIPIHVKQIRGLAFN
RQADSLLLSAALDNTIKLTSLMTNTVVQTYNTGKPVWSCCWCLDNNNYVYAGLSNGSVLV
YDTRDTSTHVQELQPLRSRCPVASLSYVPRAASSSFPCGGLIAGSLDGGCFWEQVDGTTY
RPHMLPLETGGCTDIQVQPESRHCLVTYRPGRSKSSLRCVLMELNRTPQQDAAQEPSCSC
YPVQTFSAGSSCKLLTKNAVFRSPAGEGSTLVCAGDEATNSTMVWDAGSGTLIQKLSADL
PVLDICPFEVNQGSYLASLTEKMLKIYKWE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagagatggcaggagcactggaatagagatactaagggcagacatgtatttatt
ttaggttgtgagatggaggtgatggaggcgatggaggtggacttgcagctggggggccct
agtagggaaccagagccagatgttgtggcagaccaggtagatctccctattgtcatccct
gactctggcagtgaaacagaggacgaggcagacgcagctccctgtgacccaccacggctc
ccgaacacctgggcgttcagtcagaacagagccagagtggagggtcaagttggatccagg
atcagaagggagggtcatattgagccgactggattccctaacctatttcaccccatgtta
tacccattgattgtacctgtattgtttctgtgtggttaaaggccaggcctcagggagcac
tactccacccagaccgctgcgcttgctagcagcttcctggatttcctgctgcgagtccct
gcagccaaccaggccgagggcgactctgggagtacgacagagctgagcgagtcggaggat
gaggcagatcccctggggccagcagcagaccctcccaattcggccgttccctccagccct
cgtccaaaccctccagttacgccacccgaaggcctttattcttcagattctaatgcaacc
acagaggctgcgaggactgtgactggaaatcaagtgaatcctgaggttgtatcagaccca
ctagcctccagtgaaccggcccttcgattgtcccagggggatgagggggaaggggagacc
tgctccatctgctttgagccctggaccacgtcaggggagcatcagctggccaccctgcgc
tgcggacatctctttggctacacctgcatcgaccgctgggtgaagggccagggccaggga
gccaagtgtccccagtgcaacaagaaggccaagcgcaccgatatcgtcctcctgtacgcg
tgcaagctgagggctctggacaacaccgagcaggagagtatgaagaggtcactggagcaa
gagcattcactgcgtagaaaggctgatctggagtcagcgcagtgccgactacaactgcag
gtggtgacagacgaatgtgggaaattgcataagcagctacaggagctgaagacgctgatg
gcccagcctggctgtgggccctcacagagctcaggggcttatctctctgggccctttcag
agacaggacagtacccaggggggccactatgtcttctccaaggccgtgctggtgtcccag
gtggggggatgcagggtgctgtcctactgtgaacccctcagctgcctgctggcctctcag
ccctccccacacactaccctggtgcccggctgcggtgtgaagaaggtgagcacggtgaat
ctgaaggcctgccagtacattcccatccatgttaaacagatcagaggcctagccttcaac
agacaggccgacagtctcctgctctccgctgccctggacaacaccataaaactcaccagt
ctaatgaccaacacagtggtgcagacctacaacacaggtaaaccagtgtggagctgctgc
tggtgcctggacaacaacaactatgtgtacgctggtctcagtaacggctccgtgctggtg
tatgacaccagggacaccagcacacatgtccaggagctacagccgctacgttccaggtgt
cccgtggcatccctgtcctatgtgcctcgcgccgcctccagctcgttcccatgtggtggc
ctcatcgcaggctctctggatgggggctgcttctgggagcaagtagacgggaccacctac
agaccccacatgttgcccctggagacaggaggctgcacagacatccaggtgcagccagag
agcagacactgtttggtcacctacagaccagggcgctccaagtcatcgctgcgctgtgtt
ctgatggagctgaacaggactccccagcaggacgcggctcaggaaccctcgtgttcctgc
tacccagtccagacattcagtgctggctcctcctgcaagctgctcaccaagaatgccgtg
ttcagaagcccggccggggagggctccactctggtgtgtgccggggacgaggccaccaac
tccaccatggtgtgggatgcagggagtggaaccctgattcagaagttgtctgctgacctc
ccagtgttggacatctgcccgtttgaggtgaaccagggcagttacctggcctctctcact
gagaagatgctcaaaatttacaagtgggaatga
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