Salvelinus fontinalis (brook trout): 129862823
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Entry
129862823 CDS
T11136
Symbol
ambra1b
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1B
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04137
Mitophagy - animal
sfon04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129862823 (ambra1b)
04137 Mitophagy - animal
129862823 (ambra1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129862823 (ambra1b)
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129862823 (ambra1b)
Membrane trafficking [BR:
sfon04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
129862823 (ambra1b)
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
129862823 (ambra1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
EIF3I
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Motif
Other DBs
NCBI-GeneID:
129862823
NCBI-ProteinID:
XP_055790808
LinkDB
All DBs
Position
9:52582012..52626504
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AA seq
1456 aa
AA seq
DB search
MASRHQRNSVRILSSRERGSQAFGSKRLLQQLVEEKVRWMKWQSQKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEV
RIWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTGSET
ERVRLVRFDPLGHNLLTATVNPSNQQNDDDSEVPMDSVEMPHFRQRSFLPSQPVRRTPIL
HNFLHILSSRSSGAQAGGDASRPGGESSGEPPSMPLGQYPASQDRGLPFPGCTQHLGMVC
LCSRCTANRSPSLGEGPSSRPVVLPEHPQPAPHASTFSSARTEPRQPSDPGGDQQRPSAF
TTVYYSAGSSLHRAVPTAHVASPPLSQQPPPPPTSHQPPSRPLPGPDWTRSLLNMRGSES
RTGGSEGGVSGGGGMGGVGGGMLPPRTSSSSVSLLSVLRQQDGSSQSPVYTSATEGRGFP
TQSSSEPSSGPVANQRGGGGAGTSSGHHPFWDGTRSNPTSFRNVLQCNLSRYFMEFDRMQ
DLESPLGGVGGGEGGQELLNNNMDPERPRPSSSHYQPQPPPPTPAENNPPPSNAAHSSRG
QLNRCRACHNLLTFNHDSQRWERTSPASSTSAVSTQEGSSSPWQQPTSPAYEETHVSPQR
REPQPQPPERERRVTQPPEPSERQPSPGPHGAAMPFPTIASSTAQPGEQTVGLVYNQETG
QWERVYRQAASSRSTVADAPPEALSQEMPVDNPDEDSLRRRLLESSLLSLSRYDMGGSRD
HPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQNRLRTLSSSSDSPAGNPSAAM
ENSDVDFEELDDNGDRTRHRTPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGL
ATHSSVNRVLAGASIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVPNCKI
YNDASCDISADGQLLAVFIPSSQRGFPDEGILAVYSLAPHNLGEVLYTKRFGPNAISVSL
SPMGCYVMVGLASRRILLHPSTDHMVAQVFRLQQPHGGETSIRMVFNVVYPMAPDQRRHV
SINSARWLPDPGMGLAYGTNKGDLVICRPVFYRSDGESPAEASAEPIFTVNSGGGASRTR
STDRPGAPSRSSWRLDRDMGLMNAIGLQPRHPAPSVTSQGTQTPIVQLQNAETQTERDLP
RPSTSHAAAYEVRQELPSTSREAKGSLEQPQTSQIEDSALGDASTEAGTSTANTGEAPEY
APGEDALARIRRLIAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIHRGSQTGAGAAAK
RPSSSDPILADPGPSTASPSTCPLNSLCLGLEHPPAPSEPHPGQVWGLPSLSQPQPPGLA
SEGEGASLSVAMDIDDVFEGAGRMDDSEPGPSSSLLFSSSSRGSYPSGTGGNGNNNNNNN
NGSNNRDSYPGDPYSR
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcgtcatcagaggaactctgtgcggatcctgtccagccgggagcgcggctca
caggcctttggctccaagcgcctcctgcagcagctggtggaggagaaggtccgctggatg
aaatggcagagtcagaaagtggagctgccagacagccctcgctcgacgttcctgttggct
ttcagcccagaccggaccctcatggcttccactcatgtcaatcacaacatctacatcaca
gaggtgaagactggaaagtgcttgcattcgctggtaggccaccgccgcacgccctggtgc
gtgacctttcaccctaccatcccaggtctggtggcctccgggtgccttgacggagaggtc
cgcatctgggacctgcatggtggcagtgagagctggttcacggaaagcaacgtggccatt
gcctcgctagccttccaccccactgcccagctcctcctcatcgccaccaataacgagctc
cacttctgggactggagccggcccgagccctttgccgtggtcaaaaccggcagcgagact
gaaagagtcaggttggtgagatttgatcctttggggcacaatcttctgactgctactgtg
aacccctccaaccagcagaatgatgatgactcagaggtccccatggacagcgtagagatg
ccccacttccgccagcgctccttcctgccctcccagcctgtacgccgcacgcccatcctc
cacaacttcctgcacatcctttcgtcacgctcctcgggagcgcaggccgggggggatgcg
tcccgccctggcggggagagcagcggcgagccccccagcatgcctttgggccagtaccca
gcctcgcaggaccgtggactgcccttcccgggctgcacccagcacctgggcatggtgtgc
ctatgcagccgctgcacagccaaccgcagcccctctctgggtgaggggccctcctccagg
cctgtggtcctccctgagcaccctcagccggccccccacgcctccaccttttcctcagcc
cgtacggagccccgacagccttcagatcctggtggggaccaacagcggccctctgccttc
actacggtctactacagcgccggcagctccctgcaccgtgccgtgcctactgcccacgtg
gccagcccgcccctgagccagcagcctccgccaccacccaccagccaccaacccccctcc
cgcccactgcccggacccgattggacacgcagcctgctgaacatgagaggctcagagagc
aggactggagggagtgaaggtggggtgagcgggggaggtggtatgggtggtgtcgggggt
gggatgctgcccccccgaaccagctcgtcctccgtcagcctgctgtcagtgctccggcag
caggacggctcctcccagtcccctgtctacacttccgccacagagggacggggtttcccc
acgcagtcaagctctgaaccgagctctggccccgtggccaatcaacgaggtggtggaggg
gcgggcaccagcagcgggcaccaccctttctgggacggcacgcgcagcaacccgacctcg
ttccgcaacgtgctccagtgcaacctgagccgctacttcatggagtttgaccgcatgcag
gacctggagtcgccgctggggggcgtcgggggaggggagggcggccaggagctgctcaac
aacaacatggacccggagagacccaggccttcctcctcccactatcagccccagccaccc
ccaccaaccccagccgagaacaacccccctccctccaatgcggctcactcctctcggggc
caactgaaccgctgccgggcctgccacaacttgctcaccttcaaccacgactcccaacgc
tgggagcgcaccagcccagcctcgtccacctccgcggtctccacccaggagggctccagc
tctccctggcagcagccgaccagccctgcctatgaagagacccatgtgtcaccacagagg
cgggagccccaaccccagccaccagagagggagaggagggtaacccagcccccggagccc
agcgagcggcagccctccccaggccctcatggtgcggccatgcccttccccaccattgcg
tcgtccactgcccagcccggtgagcagacagtgggcctggtgtacaaccaggagacgggc
cagtgggagcgcgtctaccgccaagccgcctccagccgctccaccgttgccgatgcaccg
ccagaggccttaagccaggaaatgcctgtggataacccagacgaggactctctgaggagg
aggctgttggagtcctccctcctctctctctcccgctatgacatgggaggatccagagac
caccccatctacccagaccctgccaggttgtccccggctgcgtactacgcacagagaatg
atccagtacctgtcgaggcgggacagtatccgccagcgctcgctgcgctaccagcagaac
cgcctgaggaccctctcctcctcgtcggacagcccggccggcaacccctcggccgcaatg
gagaacagcgacgtggactttgaagagctagatgacaacggagacaggacgaggcaccga
acaccacgcaacgccaggatgtctgcgccttcactggggcgattcgttcctcggcggttt
cttttacctgagtacttgccctacgctggaatcttccacgagaggggacagcctggcctg
gccacccactcctctgtcaacagggtcctagcaggtgcctcaatcggggacggccagtcg
gcggtggccagcaacatagccaacaccacctaccggctgcagtggtgggacttcaccaag
tttgatctacctgagatcagcaacgcctctgtgaatgtgctggtgccaaactgtaagatc
tacaacgatgccagctgtgacatctcggcggacgggcagctcctggcagtgtttataccc
agcagccagcggggcttccctgacgagggcatcctggctgtgtactccctggcacctcac
aacctgggggaggtgctctacaccaaaagatttggtcccaatgccatctcggtgagcctg
tctcccatgggctgttatgtgatggtgggcttggcctcccgcaggatcctgctgcatccc
tccactgaccacatggtggcgcaagtgttccggctgcagcagccccacggtggagagacc
tccatcaggatggtgttcaatgtggtctaccccatggctccggaccagcggcggcatgtc
agcatcaattcagccagatggcttccagacccggggatgggcctggcctacgggaccaac
aagggagacctggtcatctgcaggcccgtgttctaccgtagtgatggagagagcccggcc
gaagcaagcgcagagcccatattcacagtcaacagcggtggtggagccagcaggacccgc
agtacagatcgaccaggggcccccagtcgctccagctggagacttgacagagacatgggt
ctcatgaacgccattggcctccagccccgacaccccgccccctctgtgacctcacagggc
actcagacgcccatcgttcagctgcagaacgccgagacgcagacagagagggacctcccc
aggcccagcacctcccacgctgctgcttatgaagtccgtcaagagctcccgtccacgagc
cgcgaggccaaagggagcctagagcagccacaaaccagccagatcgaggacagtgccctg
ggggacgcctcgacagaagccggcacctctaccgctaacaccggtgaggccccagagtac
gccccgggagaagacgccctggcgcggatccgccggctcatcgcagagggcggcatgacg
gcggtggtccagcgggagcagagcaccaccatggcctccatgggtgggtttggcaacaac
attatcgtcagccaccgcatccaccgcggctcccagactggggcgggtgctgctgccaag
cgtcctagcagcagtgaccctattctggccgaccctggcccctctacagcctccccttcc
acctgccccctcaactccctgtgtctcggcctggagcacccccctgctccctcagagcct
cacccaggccaggtgtggggtctgccctccctctctcaaccacaaccccctggcctagcc
tcagagggtgagggggccagtctctcagtggccatggacatcgacgacgtgtttgaagga
gccggccgaatggacgattctgagccaggcccctcttcctccctgctcttctcttcttcc
tctcgcggctcttacccctctggcaccggcggaaatggcaacaataacaacaacaacaac
aacggcagtaacaacagagatagttacccaggtgacccttacagcaggtag
DBGET
integrated database retrieval system
