Salvelinus fontinalis (brook trout): 129862826
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Entry
129862826 CDS
T11136
Symbol
prdm11
Name
(RefSeq) zinc finger protein 862 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129862826 (prdm11)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
129862826 (prdm11)
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GFIT
Motif
Pfam:
PRDM2_PR
SET
FOG1-like_PR
Zn_ribbon_PRDM4
Dimer_Tnp_hAT
DUF4954
Motif
Other DBs
NCBI-GeneID:
129862826
NCBI-ProteinID:
XP_055790814
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Position
9:52879466..52904661
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AA seq
1148 aa
AA seq
DB search
MNYVGLNLHSVSPLPSTMAASSAYQTKPSSEAGPNSSTSLIKDECESEEPSKKLKVDHEH
GASESHHKVDFWFCEECKEYFLEECPNHGPPVFVPDTPVALGVPNRASLTVPSGIELVRE
EEEVDVCCIDAGIPKGALFGPYQGELVSKDYSSGFFSWMIVDENNTYKSIDGSDETKANW
MRYIRNSSDENERNMTAFQHGEHIYFRVCRELSAGERLRVWYSDDYMRRLHSVSQDSIGH
NLDTGLLTVGKSEAQEETKGPVLRSALHGRCSLSKHTSEEGDGQPQAKKKKIDLIFKDVL
EASLEASKSQGNPLNSTFSMRRTRAQRVTLTSQSGESYLAQEECKVAGLGLHPSEHLEGG
FNVRCLKMEDSEDDPGQIHEEPSTSFCPNCVKLKRRIRELEAEVIRLRGGEQVEVPPHPE
LAPIDELQAAEAMTPIPVVLDEDDQDVDSADESITADLMVAADDSSKLLAGPGRRIRRFK
QEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSNLHKK
CLQLYKLRMHPEKTEEMCRNMMLLFNAAYHLALEGRPFSDLRALAELLKKCELKVVDQYM
NEGDCQILIHHIARALKEDLAERIRLSPFLSVIMDGQNDDLLSDTVAVYVQFTTSEGPPA
TEFLSLQRLSVGSVDGYLQAIDRAFAVLGLKLQDMLVAGLGVDGSNISSSLRANLYIAVR
KKLPWILCLPVMIHRPHLEVLDAISGKELSCLEDLENNLKQLLSFYRYSPRMMAELRSTA
PTLSEETEFLGDIRAVSWIIGEPNVLNALIKDYLEVVAHLKDISGQTQRADAAAIALTLL
QFLMDYQSVKLIYFLLDVIAVLSRLAFIFQGDYLLVSQVDAKIEEAIHEIGQLVDCPGEY
LQEFEENFRESFNGVDLNNLRVAESKFQSIREKICQKSQGILSQRLDMHSRTVVKACRVL
DLTTWPRNRDDLRAFGEEEILLIFDHLEAIPSAVRETSRDRTDARGSLLVEWRDLKADYY
SMNGFKEVVSQISRHKQRFPLLNRILQVVRVLPTSTTCCDKGRGSLQKVRKNNRSRLTLD
QMNDLLTLAVNGPPIANFDGKRPLDSWFEEKSGNSYSLSAEMLNRMSANEQKYVLHSMNV
NTEFYPDI
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgaattatgtgggactgaatttgcactcagtgagcccacttccctccacaatggcagca
tcgtctgcctatcaaaccaagccatcctcagaagccgggcccaacagcagcaccagccta
atcaaagacgagtgtgagtccgaggaaccaagcaagaaactcaaggttgatcacgagcac
ggtgccagtgagagccaccataaagtagacttctggttctgtgaggagtgcaaagagtat
ttcttggaggaatgcccaaaccatggtcctccggtctttgtgccagacacaccagtggca
ctgggggtgcccaaccgggcttccctcacagtgccctcgggaatagagctcgtccgggag
gaggaggaggtggatgtgtgctgcatagatgcgggcatccccaagggggcgctctttggc
ccgtatcagggggagttggtatctaaggactattcctcagggtttttctcttggatgatc
gttgatgagaacaacacatacaaatccattgatggcagtgatgaaactaaagccaactgg
atgaggtatatacgtaattcgtcggatgagaatgagaggaacatgactgcgttccagcat
ggagaacatatatatttccgtgtgtgtcgggagttgtcggcgggagagaggctccgtgtg
tggtacagcgatgactacatgaggcggctacacagtgtctcgcaggacagtattggccac
aacctggacacaggactgttgactgttgggaaatccgaggcccaggaggagaccaaagga
cctgtgctcaggtcagctctgcatggcaggtgcagcctcagcaagcacaccagcgaggag
ggggacggccaaccacaggccaagaagaaaaagatcgacctgatcttcaaagatgtcctg
gaagcttctctggaggcctccaagagccagggaaaccccctgaacagcaccttctccatg
aggcggaccagagctcagcgcgtcacgctcacttcccagagtggggagtcctatctggcc
caggaggaatgcaaagtggctggtctgggtctccacccatcagagcacctagaggggggc
tttaatgttcggtgtctgaagatggaggattccgaagacgaccctggtcagattcatgag
gagccttctacctcgttctgccccaactgtgtgaagctgaagaggaggattcgggagctg
gaggcagaggtgattcgtctgaggggaggagagcaggtggaggtaccaccccaccctgag
ctggcaccaatagatgagctccaagcagctgaggccatgacccctattcccgtggtgctg
gatgaggatgatcaggatgtggactctgcagatgagtccatcactgctgacctcatggtg
gctgctgacgactcctccaagctgttggctgggcctggccgacggatacgccgcttcaag
caggaatggctcaagaagttctggttcctgcgctactcgccaaccctcaacgagatgtgg
tgtcatgtctgccgccagtataccgtccagtcctcacgcacctccgccttcatcatcggc
tccaagcagttcaagatccacactatcaagctgcacagccaaagcaacctgcacaaaaag
tgcctgcagctatacaagcttcggatgcacccggagaagacagaggagatgtgtcgtaac
atgatgctgctgttcaatgctgcttaccacctggcactggagggccgacccttctcagac
ctgcgagcgctggctgagttgctcaagaagtgcgagctcaaggtggtcgaccagtacatg
aacgaaggtgattgccagatcctcatccaccatatcgccagggcgcttaaggaagacctg
gcggagaggatacgcctgtcgcccttcctcagtgtcatcatggacgggcagaacgatgac
ttgctgtcagacaccgttgccgtctatgtgcagttcaccaccagcgaaggaccccctgcc
acagagttcctctccctacagaggctaagcgttggcagtgtggatggctacctccaggcc
attgatcgggcctttgctgtgcttggtctgaagcttcaggacatgctggtggccggtctg
ggggtcgatggctccaacatctcctccagtttgagagcaaatctgtacattgcagtacgg
aagaagcttccctggatcctctgcttgccggtcatgatccatcgtcctcacctggaggtg
ctggatgccatcagtgggaaggagctgtcctgcctggaggaccttgaaaacaacctgaag
cagctgctgagcttctatcggtactcccctcgcatgatggccgagctcaggtctaccgcc
cccacgctgtctgaggagacagagttcctgggagatatacgagccgtcagctggattata
ggagagccaaacgtcctgaatgcccttatcaaagattacctggaggtggtggcgcacctc
aaggatatcagcggccaaacgcagagggcagatgcagctgccatcgccttgaccctgctt
caattcctcatggattaccagtctgtcaagctaatatactttctcctggatgtcatcgct
gttctttcgcgtctggccttcatctttcagggggactacctgctggtgtctcaggtagac
gccaagatcgaagaggcaatccatgagatcggtcagctggtggactgccctggggagtat
ctgcaggagtttgaggagaacttccgcgaaagcttcaacggcgtagacctgaataacttg
cgcgtcgccgagtccaagttccaatccatccgcgaaaagatctgccagaagagccaggga
atcttgtcccagcgactcgacatgcacagccgcacggtggtcaaggcgtgccgtgtgctt
gacctcaccacctggccacgcaacagggatgacctacgagccttcggggaggaagagatc
ctgctcatttttgaccaccttgaagcgatcccctcggctgtccgggagacgtcgcgggac
agaactgacgctcggggcagcttgctggtggagtggagggacctcaaagccgactactac
agcatgaatggcttcaaggaggtggtcagtcaaatctccaggcacaagcagcgcttccct
ctgcttaaccgcatactccaagttgtcagggtcttgcccacttccaccacctgctgtgac
aagggccgagggtccctgcagaaagtgcgcaagaacaaccgctcaaggctgacgctggac
cagatgaatgacctactgaccctagcagtcaacgggccgccaatagcaaacttcgatggc
aagcgaccattggacagctggtttgaggagaagtctggcaacagctattcactctcagcc
gaaatgctgaatagaatgtcggctaatgaacaaaagtatgttctgcacagcatgaatgtg
aacacagagttctaccctgatatttga
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