Salvelinus fontinalis (brook trout): 129862851
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Entry
129862851 CDS
T11136
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
sfon
Salvelinus fontinalis (brook trout)
Pathway
sfon04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129862851 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129862851 (sin3aa)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
129862851 (sin3aa)
REST complex
129862851 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
129862851 (sin3aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
SPCC191_01
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
129862851
NCBI-ProteinID:
XP_055790877
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All DBs
Position
9:complement(53625194..53649314)
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AA seq
1289 aa
AA seq
DB search
MAGYGTIGIGSFSPLEHEFNMKRRLEEQEPVFASQQRRLTGSTEAFQHRVLAPAPAVYEA
VGDSMQPTAGNIQYSVPQGYQVPTVPHNSSGHGHTPSPAVHHHSPAVQPHGPPVMQGHAH
PPASAQGQQQFQRLKVEDALSYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISR
VSQLFKGHPDLIMGFNTFLPPGYKIEVATNDLVNVTTPGQIHHITPHGISISQIPLSGPP
TLHQPQVPAPTTTSAPPPPTQPTPTKISKQPLQSPVLTPSSQPNPSIPAYASPRSPTLQP
HTPISGTPNAPPLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAK
EAGGNYTPALTEQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAESVRND
HGGTAKKLQLNNKERPNQNGCQIRMLSGTVATPPVKKKPKLLNLKDSSLVEASKHGDGTE
SLFFEKVRKALRSAEAYDNFLRCLVIFNQEVISRTELVQLVLPFLGKFPELFNWFKNFIG
YREMSHTERYPKERALEGIAMEIDYASCKRLGSSYRALPKSYTQPKCTGRTPLCKEVLND
TWVSFPSWSEDSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRMLETVQRKLSRM
SAEEQAKFRLDNTLGGSSEVIHRKAIQRIYGDKAPDIIDGLKKNPAVSVPIVLKRLKTKE
EEWREAQRGFNKIWREQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIESIYDERQEQ
ASEENTAMPSGPHLTLTYEDSQILDDAAALIIHHVKRQTGIQKEDKYKIKQIIHHLIPDM
LFAQRGELSDLEEEEEEEMELDEAVAKKHNGVAQGGSPNKSSKLLFCNTGAQKLRSCAEA
YNLFYVNNNWYIFLRLHQTLCSRLMRIYGQAERQIEEDIRERDWEREVLGLKRDKNDNPA
IQLRLKEPMDVEVEDYYSAFLEMVRNLLDGNMEPAQYEDSLREMFTIHAYTAFTMDKLIQ
SIVRQLQHIVSDEICVQVTDLYLAEGTNGATGGPLPTQTSRASTEGCYQRKAEQIMSDEN
CFKLMFLKNRGHVQLTVELLDTEEENSDEPMETERWSDYVGRYLNSDSTSPELREHLAQK
PVFLPRNLRRIRKYQRGREQLEKEASEGEKKSMENAENLKMECMFKLNSYKMVYVFKSED
YMYRRTALLRAHQSHERVSTRLHKRFQAWVDFWVKEHVTRDMAAETNKWLMGEGRDGLVP
CTTTRELEILHFMNINKYRVKYGSPFKAP
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctatggaaccatcggcattgggtctttcagccccctcgagcatgagttcaac
atgaaacggcgcttggaggaacaggaaccggtatttgcgtcccaacagcggcgcctcacc
ggcagcacggaggctttccagcaccgcgtcctggccccggcgcctgccgtgtacgaggcc
gtgggcgacagcatgcaacctaccgcaggcaacattcagtattctgtcccacagggctac
caggtccccactgtgccacataactcgagtggtcatgggcacacccctagcccagctgta
caccaccacagcccagcggtccagccccacgggccccctgtgatgcagggccacgctcac
ccccctgcctcagcccagggccagcagcaattccagaggctcaaggtggaagatgctttg
tcttacctggaccaagtgaaactccagtttggcaaccaacctcaagtctacaatgacttc
ctggacatcatgaaggagtttaagtctcaaagcattgacactccaggggtgataagcagg
gtatcccagctcttcaaaggccaccccgacctcattatgggattcaacaccttcctgcca
ccgggctacaagatcgaggtcgcgaccaacgacctggtcaatgtgaccacgccgggtcag
atccaccacatcacccctcacggcatctctatctcacaaatccccctgtcgggaccaccc
accctgcaccagccccaggtgccagcccccaccaccacctctgcaccaccccctcccaca
cagccaacccctaccaagataagcaagcagccactgcaatctccagtcctcacgccaagc
agccagcccaatccgtccatccccgcctatgcctccccccgatccccaaccctgcagccc
cacaccccgatcagtggcacgcccaatgccccaccgctgcagaacaaccagcctgtggag
ttcaatcatgccatcaactacgtcaacaagatcaagaaccgtttccagggtcagccggac
atctacaaagccttcctggagatcctgcacacctaccagaaggagcagcggaatgctaag
gaggcaggagggaactacaccccagccctgacagagcaggaggtctatgcccaggtggcc
cggctcttcaagaaccaggaggaccttctctctgagtttggccagttcctaccagatgcc
aacagctcggtgctgttaagcaagacgacagcggaaaaggcggagtctgtgcggaatgac
cacggtggcacagcgaagaagctgcagctcaacaacaaagagaggcccaatcagaacggt
tgccagatccgcatgctctctgggacggttgccacaccccctgtcaagaagaagcccaag
ttactgaatttaaaagactcgtccctggtagaagccagcaaacatggagatggcacagaa
tctctgttctttgagaaggtgcggaaggccttgcggagtgcagaggcctatgacaacttc
ctgcgttgtttggtcatcttcaaccaagaggtcatctccagaactgagctggtgcaactg
gtgctgcctttcctggggaaattccccgaactgttcaattggttcaagaacttcatagga
taccgggaaatgtcccacactgagcgctatcccaaggagcgtgccttggagggcattgcc
atggagatcgactatgcttcctgcaagagactaggctcgagctacagagcactgccgaag
agctacacgcagcccaagtgcaccgggagaacgccactgtgcaaagaggtcctcaatgac
acctgggtgtccttcccttcctggtctgaagactccacctttgtgagctccaaaaagacc
cagtatgaggagcacatctacagatgtgaggatgaacgcttcgagctggacgtggtgctg
gagacgaacctggccaccatccgcatgctggagaccgtacaaagaaaactgtcccgtatg
tctgccgaggagcaggccaagttccgcctggacaacacgctgggaggctcctcggaagtc
atccatcgcaaggccatccagaggatatacggtgacaaggcccctgacatcatcgatggg
ctcaagaagaaccccgctgtgtctgttcccattgtgctgaagaggttaaagaccaaggag
gaggagtggcgggaagcccagaggggcttcaacaagatctggagggagcagaatgagaag
tactacttgaagtctctcgaccaccaaggtatcaacttcaaacagaacgacaccaaggtg
ctacgatccaagacactgctcaatgagattgagagcatctacgacgagcgacaggaacag
gcgtcggaagagaacaccgcaatgcccagcggcccccacctgactttgacctacgaggac
agccagatcctggatgacgctgccgccctcatcatccaccacgtcaagcggcagacgggc
atccagaaggaggacaagtacaagatcaaacaaatcattcaccacttgatccccgacatg
ctgttcgcacagcgaggcgagctctcggacttggaggaagaagaggaagaggagatggag
ctggatgaggccgtggccaagaagcacaatggcgtcgcgcaaggcggaagccccaacaag
tcctccaagctcctcttctgcaacacgggtgcccagaagctgcgaagttgcgccgaggcc
tacaatctattttacgtcaacaataactggtacatcttcctgcggctgcaccagacactg
tgctcgcggctgatgcggatctacgggcaggcggagaggcagattgaggaggacatccgg
gagcgtgactgggagagagaggtgctgggcctcaagcgagacaagaatgacaaccctgcc
atccagctgagactgaaagagcccatggatgtagaggtggaggactactactctgccttc
ctggagatggtgcggaaccttctggatggcaacatggagccggctcagtacgaggactcc
ctccgggagatgttcaccatccatgcctacaccgccttcaccatggacaaactcatccag
agcattgtcaggcagctccagcacatagtgagtgacgagatctgcgtgcaggtgacagac
ctgtacttagcagagggcaccaacggggccaccggaggtccccttcccacccagacatcc
agagcttccacagagggatgctaccagcgcaaggcggaacagatcatgtccgatgagaat
tgcttcaagcttatgtttctaaagaacagaggccatgttcaactgacagtggagcttctg
gacaccgaggaggagaactccgatgaacccatggagacagagcgctggtcagattacgtg
ggtcgctacctgaattctgactctacctctccagagttgcgggaacaccttgctcagaaa
cctgtcttccttcccaggaacctccgtcggatacgtaagtaccaaaggggtagggagcag
ctagagaaggaggccagcgagggagagaaaaagtccatggagaatgctgagaaccttaaa
atggaatgtatgttcaagctcaactcctacaagatggtgtatgtcttcaagtctgaggac
tacatgtaccgacgcactgccttgctccgagctcaccagtcacacgagagagtgagcact
cggttgcacaagcgcttccaggcctgggtcgacttctgggtgaaggagcatgtcactcgc
gatatggccgctgagaccaacaagtggctgatgggagaggggcgtgacggcctggtgccg
tgcaccaccacccgcgagctggagatcctccacttcatgaacatcaacaagtaccgtgtc
aaatacggctcacccttcaaagcaccataa
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