Salvelinus fontinalis (brook trout): 129862857
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Entry
129862857 CDS
T11136
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129862857 (lingo1a)
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
129862857 (lingo1a)
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NCBI-GeneID:
129862857
NCBI-ProteinID:
XP_055790886
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Position
9:54857853..55117377
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AA seq
615 aa
AA seq
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MGAREASGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNAQERSVICHRKKLMSVPE
GIPTETRLLDLSKNRIKTINMDEFAAYPNLEELELNENTISAIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTQLDISENKIVILLDYMFQDLYNLRSMEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLIFLRLRHLNIYVIKDYSFKRLYRLKVLEIA
NWPYLDTMTSNCLYGLNLTSLTITNGNLTSIPYVALRHLVYLRFLNLSYNPIHTIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKIFNVSGNALSTLEESAFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKAQQKFVDEGTTVHFVCQADGDPAPVIMWLSPQKQFITTKTIGRLTVFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTSLAHLHVHSYSPDWPHQPNKTFAFISNQPNENGANGTRTN
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGATKHNIEIEYVPRKSDAGMS
SNNADAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgggggccagggaagcgagtgggcacagctacctggtggcttgctggcagcccattctg
attctgatgctgggcaccgtactgtccggttccaccacaggctgcccgtcccgctgcgag
tgcaatgcccaggagcgctcggtcatatgccaccgcaagaagcttatgtccgtccctgag
ggcatccccacagaaacgcggctgctggacctcagcaagaaccgcatcaagaccatcaac
atggacgagttcgcagcctaccccaacctggaggagctggagctcaacgaaaacactatc
tcggccatcgagcccggcgccttcaacaacctgtacggcctccggacactggggctgcgc
agcaacaagctcaaactcatccagctgggtgtgttcacgggcctcagcaacctcacccag
ttggacatcagtgagaacaagatagtcatcctgctggactatatgttccaagacctgtac
aacctgcgctccatggaggtgggcgacaatgacttggtgtttatctcccaccgggccttc
catggtctcagcagcctggagcagctgactttggagaagtgcaacctgacctcggtgccc
accgaggccttcacccacctccacagtttgatctttctcaggctgcgccacctcaacatc
tacgttattaaggattactccttcaaaagactgtaccggctgaaagtgctggagatcgcc
aactggccctacctggacaccatgacctccaattgcctctatggactgaacctcacctcg
ctgaccatcaccaatggcaacctgacctccatcccatacgtggctctccggcacttggtc
tacctacggtttctgaatctgtcctataaccccatccacaccattgaggggaataagctc
catgaccttctgaggctccaggagtttcacctggttgggggcaggctggctatgatcgag
ccctactcgttccgaggcctaaactatctgaagatcttcaatgtgtctggcaatgccttg
agcaccttggaggagtctgcgttccactcggtaggcaacctggagactctggcgctttac
gataaccccttggcatgtgactgccggctgctgtgggtgttccggagacgctggaggctc
aacttcaaccggcagcaacccacctgcgcttcacctgagttcgtacagggaaaagagttt
aaagatttcccggacgtcctgcagcccaactacttcacgtgtcgcaagtccaggatccgg
gaccgcaaggcgcagcagaaatttgtggacgagggaactactgttcattttgtatgccag
gcggacggtgatcccgccccagtcatcatgtggctctcaccccagaagcagttcatcacg
accaaaaccatcgggcggctcacagtattccccgatggcacccttgaggtgcgctacgct
cagattcaggataatggcacgtatgtgtgtatagccagcaacgccggtggcaacgacaca
tctctcgcccacctgcatgtccatagctactctccagactggcctcaccaacccaacaag
acctttgcatttatctccaaccaacccaatgagaatggtgccaatgggacccgaaccaac
gtccctttccccttcgacataaagaccttaatcatcgccaccaccatgggtttcatatcc
ttccttggtgtcgtcctgttttgtctggtgctactctttctgtggagtagaggtaaaggg
gccacaaagcacaacatagagattgagtatgtgccacgcaagtcagacgctgggatgagc
agcaacaacgcagacgcccctcgcaagtttaacatgaaaatgatttaa
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