Salvelinus fontinalis (brook trout): 129863379
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Entry
129863379 CDS
T11136
Name
(RefSeq) matrin-3-like isoform X1
KO
K13213
matrin 3
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129863379
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129863379
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
RRM_5
zf-U1
Motif
Other DBs
NCBI-GeneID:
129863379
NCBI-ProteinID:
XP_055791301
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Position
10:3008175..3019108
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AA seq
978 aa
AA seq
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MEGSEGQSSVRKGSGDGALSAMNLYATLGLSPEDVDALAKIPENEISVETLPYLIMQLKA
NRAKQEEQGETPPKRDGQEEDTDVKDRGRRDSPPAFRRQSSSHSDTDYKKVEVRPEQAEA
RKDSHHTRPSTEKTSDSQPSSYQLEDFQGVVPNIYPHTCSLCFCMLNSTKQWKDHLNGLR
HAEGCRELLRLYPDWEKQDVQGKKIPISIPSRDANSPPRRAPRPAMPYKRQHSSDRVGGE
VWSAPERHHLKPKAGTKVVVAKYPRGSVAVEDLVTLAKPFGTVVKHLVFPCKGFVELGSH
KEAVNMVDHYSESKAIVKGNGLTLYLSPVVCSIYTPRSDEPPGKRPNKQVSNTVVCFSRV
SPGKERESEILDLAKMFGDVRHSSFLSDQALIEMVDWKDADIMVKYYHSNPLKINGKSVK
VSLSSSLKRLRESPDSTTSRRADSSKSQSSRQKSEETSKNSNSTNKEGPSTGKQPAEKVV
EQGKGQQSSSEEVKEEVKQDIKDEEIKEKIEEVVKNERKGEDINLENKDPDKESVQVEDD
QSLLDKFGAGVDTNDSAPSKSASLVADSKDKGEPESTELLADNTLEDSDLKAADDPALCD
ADVSMEDMMEQESFHEHGDDMDDMDFPDNMDDFVTLDELDNDIGEDASMESKDSSWDGKV
VHISPIRKGYRDVEVAILKLAERANVKVVNRTISFFRQEGWLELDTTDEAHKMVKFYKGK
AQLLGKPVDIRMCYSQKKLESPSGRSIYICLLPRQKYSDVSLLRLAQPFGKITGYHLNWV
HRKCYIQFESVEAAQKMVKKCFQRPPRFYGTLIRVSLCKKGDSLISWKPPVKYELWLASQ
NNRRTRDRHGDETNGQSVKSHSPVVKEKDVQRPVSDSEGVCVDPEGEETSGVEAVPEGEK
KQQQQEPLGPYQPDNPVGLDYLVPRTGFFCKLCNIFYTNEKTANSVHCSSEEHYLNLKVI
FNCNKSLLTLWCIGKEMY
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggagggcagtgagggtcaaagttctgtacgcaaaggatctggggatggagcgttgagc
gctatgaatttatatgccactctggggctctctccagaagacgtggatgctctggccaag
attccagagaacgagatcagtgtggagacactgccttatctgataatgcaactgaaggcc
aatcgagccaagcaagaggagcagggagagacccccccaaagagagacggacaggaagag
gatacagatgttaaagaccgcggcagacgggacagtccccctgcattccgtcgccagtca
agcagccatagtgacactgactataagaaagtggaggtccgaccagagcaggccgaggca
agaaaagattcccaccacactaggccctcaacggaaaaaacatcagacagccaaccttct
tcttatcaattggaagattttcaaggagttgtgcccaatatttacccacacacatgctcg
ctatgcttctgtatgttgaattctactaagcaatggaaggatcatctcaatggattacgc
catgcagagggctgtcgagaactcttgcgtctatatccagattgggaaaaacaagatgtc
caagggaagaaaataccaatttccatcccaagtagagatgctaattcaccgcccagaaga
gcgccacgtcctgctatgccttacaagagacaacatagctcagaccgcgtaggaggtgaa
gtctggtctgcaccagaaagacaccatttgaagcccaaggctggcacaaaggtggtggtc
gctaaatatccccgtgggtctgttgctgttgaagacttggtgactttggctaagccattc
ggcacagttgtaaaacatctggtgttcccctgcaagggctttgtggagttgggttcgcac
aaagaggcagtcaatatggtggatcactacagtgaaagcaaagctattgtgaagggaaat
ggtttgactctgtacctgtcacctgtagtgtgcagtatttatacgccaaggtcggatgaa
ccaccaggaaaacgccccaacaaacaagttagcaatacagtagtttgtttttcccgcgta
tctcctgggaaagaaagagaatctgagattctcgatcttgccaagatgtttggggatgtg
agacattcgtcatttttaagtgatcaggccctgattgagatggtagattggaaggatgct
gacattatggtgaagtactaccactccaaccccctcaagatcaatggaaagagtgtcaaa
gtcagcttgtcatcgtcactgaagcgtctgagagaaagtcctgactccaccacatccaga
agagcagattccagtaaaagccaaagcagcagacagaagagcgaggagaccagcaagaac
tcaaactccacaaacaaagagggacccagtacaggcaaacaacctgctgagaaagtggta
gaacaaggaaaaggtcaacaaagctcctcagaggaggttaaggaagaggtaaagcaggac
atcaaggacgaggagatcaaggaaaagatcgaggaggtggtcaagaatgagagaaagggg
gaggacattaatttggaaaacaaagatccagacaaagagagcgtccaggttgaagatgac
caaagcttgttagataagtttggagctggtgttgatactaacgactctgctccttccaaa
agtgcctctctggtggctgactctaaagataagggggaacctgaaagcacagaattgttg
gcagacaataccttggaggattctgacctaaaggctgccgatgatccagctctgtgtgat
gctgacgtctcaatggaggacatgatggaacaggagagctttcacgaacatggtgacgat
atggatgacatggatttccctgataacatggatgattttgttacattggatgaactcgac
aacgatattggagaggatgcgtcaatggagtcaaaggattcttcatgggatggaaaagtt
gtccatattagcccaatcagaaagggctatagagacgtagaggtggccatcttgaaactg
gcagagcgagcaaacgtgaaagttgtaaaccgtaccatatccttcttcagacaggaggga
tggttagagcttgatactaccgatgaagcgcataagatggtgaaattctacaaaggcaaa
gcacagttgttggggaaacctgtcgatattagaatgtgctattcacagaaaaagttggag
agtcccagtgggagatccatctacatttgtttgcttccacggcagaagtactcggacgtc
tctctgttacggcttgcccaaccttttgggaaaatcactggctatcatttgaactgggtt
catagaaagtgttatatccagtttgagagtgtggaagccgctcagaaaatggtgaagaag
tgcttccaacgtcctcccagattttacggcaccctgataagggtcagtttgtgcaaaaag
ggagactcactgatatcctggaagcctccagtcaagtatgagctgtggttggccagtcag
aacaacagaagaacaagagatcgccatggagatgagactaatggccagtcagtcaaaagc
cactctccagtggtgaaagagaaggatgtccagcgacctgtgtctgatagtgagggggtc
tgtgtggaccctgagggtgaggagaccagtggtgtggaagctgtcccagagggagagaag
aagcagcagcagcaggagcctctgggtccttatcaacctgacaaccctgttgggttagac
tatctggtgccaaggaccggattcttctgcaagctgtgcaacatcttctacactaatgag
aaaacagccaactcagtccactgtagcagtgaggaacattacctaaacctgaaggtaatt
ttcaactgtaacaagtcacttcttactctgtggtgtattggtaaggaaatgtattga
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