Salvelinus fontinalis (brook trout): 129863382
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Entry
129863382 CDS
T11136
Name
(RefSeq) transcription factor IIIA-like isoform X1
KO
K09191
general transcription factor IIIA
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129863382
03021 Transcription machinery [BR:
sfon03021
]
129863382
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129863382
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
129863382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
TFIIIA_zf-C2H2
zf-C2H2_4
zf-H2C2_2
Zap1_zf1
zf-C2H2_ZNF462_1st
Ta0938
CPxCG_zf
zf-met
zf_Hakai
Motif
Other DBs
NCBI-GeneID:
129863382
NCBI-ProteinID:
XP_055791306
LinkDB
All DBs
Position
10:complement(3080273..3087411)
Genome browser
AA seq
386 aa
AA seq
DB search
MELSQQVPRKSFICSFSDCHASYNKAWKLDAHICKHTGLKPFVCEHDGCDKSFCDKYHLA
RHQLSHSGERPFRCTVDGCTEAFTTNYNLKKHVNRNHNHDKEKLYEYVCSFEGCGKVFRK
NNQLKSHESQQHTKLPPFQLYSCTFEGCEKRFTFPNKLRLHEKVHRGYPCEKDGCSFIGK
TWTEYTNHRKHVHRALFQCNECNKVFRDTWFLKQHQRVHAEERQVFICPREGCQRSFTTP
FNLQSHIGSYHEELRPYTCPHEGCGKTFAMKQSLQRHNVVHDPERKKQKKPRPKRSLVSR
LSGYKPKNNSHPKPHAALQSESIARGGHRMHMAALPYWMTLGLEIIPIGTSVALSAPGLC
PAVNTIKVWNAFGSLRVKKDTCQIRF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaattaagtcagcaagtaccgcgcaaaagttttatatgttcattctctgactgtcat
gcgtcgtacaacaaagcatggaaactagatgctcatatttgcaagcacacggggctgaaa
ccatttgtgtgtgaacatgacggctgtgacaagtcattctgcgacaagtaccacctagct
cggcaccagttgagccacagtggagagagaccctttagatgtacagtagatggatgcaca
gaggccttcaccacaaattacaatttgaagaaacatgttaatcgcaatcacaaccatgat
aaggagaaactgtatgaatatgtgtgtagctttgagggatgtgggaaagtgttcaggaag
aacaatcagctcaagtcacatgagtcccagcagcacaccaaactacctccctttcagctt
tatagctgtacctttgagggctgcgagaaacgattcacttttcccaataaactacggctt
cacgagaaggtgcacagaggctacccctgtgaaaaagatggctgttctttcatcggaaag
acctggactgagtatactaaccataggaaacacgtacacagagccctttttcagtgtaat
gaatgcaacaaggtgtttcgcgacacctggttcctgaagcagcaccagcgtgtccacgca
gaggagcgccaggtgtttatctgtcccagggaggggtgccagaggtccttcaccacgcca
ttcaacctgcaaagccacatcggctcttaccatgaggagctacggccttacacctgcccc
catgaaggctgtggaaagacctttgccatgaagcaaagcttacaacgccacaatgttgtc
cacgatccagaaaggaagaaacagaagaaaccccgacccaagagatccctggtttccaga
ctgagtggttacaagcctaagaataacagtcatccaaagccccatgcagctttgcaatca
gaatccattgcaaggggtggacacaggatgcacatggcagctctgccatattggatgact
ttgggtttggaaataattcccatcggcacctctgttgcactatctgctccagggttgtgt
cctgctgtcaacaccataaaagtatggaatgcgtttgggtctttgcgtgtcaaaaaagat
acatgtcaaataagattttaa
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