Salvelinus fontinalis (brook trout): 129863450
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Entry
129863450 CDS
T11136
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein isoform X1
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129863450 (bbs1)
Cilium and associated proteins [BR:
sfon03037
]
Primary cilia and associated proteins
BBSome
129863450 (bbs1)
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Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
PHTB1_N
Motif
Other DBs
NCBI-GeneID:
129863450
NCBI-ProteinID:
XP_055791434
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Position
10:4666606..4674147
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AA seq
592 aa
AA seq
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MLPCFKTNNVTLSLNSSESSKWLDAHYDPVANLYTFSSCIALADLHGDGENKLVVGDLGT
GSCNMKLKVYRGTGLMSENTLLDLPTGLVSFLMDQHEPRTPAIAVASGPFIYVYKNLRPY
FKFTLPPLEVNALEQDVWNQAREDMIDPLSLKEMLEGIRDKAEVPLSVRSLRFLMLDPQD
TEAFVNLHKAQPIQRQTVITCIGTLKKNMADEDAVSCLVIGTESKDVYILDPEAFTILSK
MSVPSAPTQMDVTGQFDVEFRITVACRNGNIYILRRDSPKPKYCIELSSHAVGLVRMGKS
VVVGCAQETLQGFTQKGKKLWTACLPAPVTTMGVMDLPTRGFQAVLVGLANCEVHLYRDK
NLISTIKTPDVVTSICFGRYGREDGTLIMTTKGGGLIVKILKRTAVFDDRDSAPGPPLAQ
SIRLNIPKKTKLYVDQTMRERENAVAMHRAFQMDLSRLRLAAARAYVKALESSLTPMSSS
LSEPLKMNAVVQGLGPSFKLTLNIQNTAACRPVMNLAISFLYDESLYSMKTAFFKIPLLV
PGLNYPIDTFVECLSDKGISDIIKVFVLREGKSAPLLTAHINMPVSEGLALN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttgcttcaaaacaaataacgttactctgtctcttaacagctctgagagcagt
aaatggttagatgcacactacgatccagtggccaatctctatactttttcatcttgcatt
gctcttgcagacctgcatggggatggtgagaataagttggtggtgggggacctgggaact
ggttcatgcaacatgaagctgaaggtgtaccgtggaactggcctgatgagtgagaacaca
ttgctcgatctacccactggcttggtttctttcctcatggaccagcatgagccacgcacg
cctgccatcgctgtggcttccggccccttcatctatgtctataaaaacctgcggccctat
ttcaagttcactctccctccgttagaggtcaatgccctggaacaggacgtctggaaccag
gcaagggaggacatgattgacccattgagcttgaaggaaatgttggagggcatccgagac
aaagctgaagttccactctccgtcagatctttgaggttcctcatgttggacccacaagac
acggaggcttttgtgaaccttcataaggcgcaaccaatacaaagacagactgttattaca
tgcatcggcaccctgaagaagaacatggctgatgaggatgcagtcagctgtctggttatt
ggcactgagagtaaagatgtctatatcctggaccctgaggccttcaccatcctctccaag
atgtccgtccccagtgctcccactcaaatggatgtgactggtcagtttgatgtggagttc
cggatcactgtggcctgtcgcaatgggaatatctacatcctccgcagagactcccccaag
cctaagtactgtattgagctgtcttctcacgctgtggggctggtgaggatggggaagagt
gtggtggtgggatgtgcccaggagacactgcagggcttcacacagaaggggaagaagctg
tggacggcttgcctgccagcccctgtcactaccatgggcgtgatggacctccccaccagg
ggcttccaggcagtgttagtgggcctggctaactgtgaggtccatctctacagagacaaa
aacctcattagcaccatcaagactccggatgtagtgaccagcatttgttttgggagatat
ggacgagaagacggaacccttataatgaccaccaaaggaggtggtctgatagtaaagatc
ctgaagaggacagctgtgtttgatgacagggactctgccccaggcccccctctggcacaa
agcatccgtctcaatatccccaagaagaccaagctgtacgtggaccaaaccatgagggaa
cgagagaatgctgtggcaatgcacagggccttccagatggacctgagtcgtctgcgtctg
gctgcagcgagggcatacgttaaagccctggagtccagccttacacccatgtcctccagc
ctgtctgagcctctcaagatgaacgcagtggtgcagggcctgggcccatccttcaagcta
actctgaacatacagaacacagccgcatgccgccctgtcatgaacttggccatcagcttt
ctgtatgacgagagcctgtatagtatgaagacagccttcttcaagatccccctactggtt
cctgggctcaactatcctattgacacatttgtggagtgcctgagtgataaaggaatctct
gacatcattaaagtgtttgttctgcgagagggcaagagtgcacccctgctgactgcacat
atcaacatgcccgtcagtgagggactggcactcaactga
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