Salvelinus fontinalis (brook trout): 129863479 Help Entry 129863479         CDS       T11136                                  Name (RefSeq) cysteine protease ATG4A-like   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism sfon  Salvelinus fontinalis (brook trout) Pathway sfon04136   Autophagy - other sfon04140   Autophagy - animal sfon04145   Phagocytosis Brite KEGG Orthology (KO) [BR:sfon00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     129863479    04140 Autophagy - animal     129863479    04136 Autophagy - other     129863479  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:sfon01002]     129863479   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sfon04131]     129863479    03029 Mitochondrial biogenesis [BR:sfon03029]     129863479 Peptidases and inhibitors [BR:sfon01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    129863479 Membrane trafficking [BR:sfon04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     129863479 Mitochondrial biogenesis [BR:sfon03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     129863479 SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  129863479 NCBI-ProteinID:  XP_055791481 LinkDB All DBs Position 10:5529595..5541543 Genome browser AA seq 413 aa AA seqDB search MEAVLAKYENQINVFSEFLEDLPDTDEPVWVLGECYNAKTGKTKLLSDVHSRLWFTYRKK FSPIGGTGPSSDAGWGCMLRCGQMILAQALVCSQLGRAWRWRAEGGQPEKYHRILHCFLD RKDSCYSIHQMAQMGVGEGKSVGEWYGPNTVAQVLKKLALFDDWNSLAVYVSMDNTVVIE DIKKQCRQANSESRLRPRPCGWQEPFTSRETPEQACSHTDGNRATTCPHSQSHSDWRPLL LVIPLRMGINHINPVYIQALKECFKMPQSCGVLGGKPNLAYYFIGFVGEELIYLDPHTTQ SAVESEAGSGVDDQSYHCLRSPRRMKITNLDPSVALGFFCKSEDDFDSWCNLVQQEIQMK RNLRMFELVENHPPHWPPFVPPTKPEVQTTGAEFIESTDKLFESEEEFEILNV NT seq 1242 nt NT seq  +upstreamnt  +downstreamnt atggaggcagtattagccaagtatgaaaaccagataaacgtgttttcggagttccttgaa gacttgcctgacacagatgaacctgtgtgggttttaggagagtgttacaatgctaaaaca ggaaagacgaagctactatcagacgtccactcgcggttatggtttacctacaggaaaaaa ttctctcccatagggggaacaggcccctcttcagatgcaggctggggatgcatgctacgc tgtgggcagatgatccttgcacaggctctggtatgctcacagctgggacgagcctggcgt tggagggcagagggaggacagccggagaagtaccatcgtatcctccactgtttcctggat aggaaagacagctgttactccatacaccaaatggctcagatgggagttggtgaaggaaag tctgtaggagagtggtatggcccaaacacagttgcacaagtgctcaagaaacttgcgcta tttgatgactggaattctcttgctgtgtatgtgtcaatggacaacactgtggtgatcgag gacatcaagaagcagtgtcgccaggcaaacagtgagagcagattgcggccgagaccctgt ggctggcaggaacccttcacctctagggaaacaccagaacaagcctgttctcacacggat gggaacagagccacgacgtgtccacattcccagtcccattctgactggagacccctactg ctggtcataccactccgcatgggaatcaaccacatcaaccctgtatacatccaggccctc aaggagtgttttaaaatgccacagtcctgcggtgtgctgggaggaaagcccaatctggcc tattacttcatcggctttgtaggagaggagctgatctacctggacccccacaccacccag tcagccgtggagtcagaggctggcagtggagtggacgaccagagctaccactgtctgagg agcccacgtcgcatgaagatcaccaacctggacccctctgtggccctgggatttttttgt aagagtgaagatgactttgacagttggtgtaacctggtccagcaggagattcagatgaag aggaacctgaggatgtttgagctggtggagaatcacccgccccactggccccccttcgtt cctcccaccaaaccagaggttcagaccacaggggcagagttcatcgaatcgaccgacaag ctgtttgagtctgaagaggagtttgagatcctcaacgtgtga

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