Salvelinus fontinalis (brook trout): 129863549
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Entry
129863549 CDS
T11136
Name
(RefSeq) claudin-4-like
KO
K06087
claudin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03272
Virion - Hepatitis viruses
sfon04382
Cornified envelope formation
sfon04514
Cell adhesion molecule (CAM) interaction
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
129863549
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129863549
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129863549
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129863549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129863549
04147 Exosome [BR:
sfon04147
]
129863549
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129863549
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
129863549
Exosomal proteins of colorectal cancer cells
129863549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Voltage_CLC
HR_lesion
Motif
Other DBs
NCBI-GeneID:
129863549
NCBI-ProteinID:
XP_055791581
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All DBs
Position
10:7810866..7816982
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AA seq
376 aa
AA seq
DB search
MVSAGLQMLGTALGVIGWIGTIIVCAMPMWKVSAFIDSNIIISQVTWEGIWMRCVFQSTG
QMQCKIYDSMLALPQDLQAARAMTVIAILSGIIAILLAVAGGKCTNCVEDEASKAKVGVT
SGVVFIIAGVLCLIPVCWIAHSIIQDFYNPHLESAQKRELSTMASQGLQIMGVMLAMIGW
LGTILTCAMPMWRVTAFVGANIVTAQVIWEGLWMNCVVQSTGQMQCKVYDSMLALPQDLQ
AARAMVIVAVIVGVCGVMMAIVGGKCTNCMEDEAAKAKACIIAGIVFIICGLLIFIPVSW
SANTLIRDFYNPLVIEAQRRELGAALYIGWGSAGLLLLGGGLLCCNCPPKEGNMGRPYVA
AKFAPVRTTSPSMNYV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcagctggattacagatgctgggcacggccctgggggtcattggctggatcggg
actatcatcgtatgcgccatgcccatgtggaaggtctccgccttcattgacagcaacatc
atcatctctcaagtcacctgggagggtatctggatgagatgcgtgttccagagcacggga
cagatgcagtgtaaaatctatgactccatgttggccctgccccaggaccttcaggctgcc
agagccatgactgtcatcgccatcctctccggcatcatcgccatcctattggctgtagcc
gggggaaagtgcaccaactgcgtggaggacgaggcgtccaaggctaaagtgggcgtgacg
tctggggtggtgttcatcattgccggggttctgtgtctgatccctgtctgctggatagcc
cacagcatcatccaggacttctacaacccgcacctggaaagcgctcagaagagggagctt
tcaaccatggcttcccagggcctccagattatgggagtaatgctggccatgattggctgg
ctggggaccatcctcacttgtgccatgcccatgtggagggtcactgcctttgtcggagcc
aacatcgtcaccgctcaggtcatctgggaagggttatggatgaactgcgtggtccagagc
acgggacagatgcagtgtaaggtctatgactccatgcttgccttacctcaggacctccag
gccgccagagctatggtcatcgtggcagtgattgtgggcgtctgcggcgtcatgatggcc
atcgtcggggggaagtgcaccaactgcatggaggacgaggctgccaaagccaaagcctgc
atcatcgccgggatcgtcttcatcatctgtggcctcctcatcttcatccctgtgtcatgg
tcggccaataccctgatcagagacttctataaccccttggtgatagaggcccagaggagg
gagctgggggcggctctgtacatcggctggggctccgcagggctgctgctgttgggaggg
ggtctgctctgctgcaactgcccccccaaggagggcaacatgggcaggccatatgtggca
gctaagttcgcccccgtccggaccacatctccatccatgaactatgtatga
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