Salvelinus fontinalis (brook trout): 129863554
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Entry
129863554 CDS
T11136
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129863554 (supt6h)
03036 Chromosome and associated proteins [BR:
sfon03036
]
129863554 (supt6h)
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
129863554 (supt6h)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
129863554 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
Spt6_S1
S1_RRP5
HHH_9
HHH_3
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
129863554
NCBI-ProteinID:
XP_055791592
LinkDB
All DBs
Position
10:8061361..8107471
Genome browser
AA seq
1753 aa
AA seq
DB search
MSDFIDSEAEESEEEFEEKDLKPKKTQAFMDDEEEEEELNTEDQDEHGNLMGLIDDDVDE
DEEEEEKKSGGAGSGSDSEDEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYDR
VKTMDDDEDDEKDQIADEIFHRGDDEDGEGELEEGETVDPPLRRHGERLDEEEEEEGEEE
SDIDDFIVDDDGQPITKRRSKKFSGYTDAALQEAQEIFGGDFDFAEFDADGAYEQGEEEE
EDQDEEGWDRPKKPTKRRVGRKSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIP
VKPAEDDELEEEAEWIYRNAFSTPTISMQESTDYLDRGSTTNFSRKGPSTIAKIKEALNF
MRNQHFEVPFIAFYRKEYVEPELNINDLWKVWQWDEKWCQLKSRKQNLTRLFRRMQGYQY
EQISADPDKPLADGIRPLDTADMERLKDVQSIDELSDVYSHFLLYYGRDIPKMQNAAKAA
SKKKKKKKKKKIEVNEEGEEEEVEEEVEEEEEEKGPDLKLASRRDMYSICQSAGLDGLAK
KFGLTPEQFGENLRDSYQRHETEQFPAEPVELAKDYVCSQFNSPEAVLEGTRYMVAMQIA
REPLVRHVLRQTFQERAKINIKPTKKGKKDMDEAHFGYSFKYLKNKPVKELNGEQFLKMC
QAEEEGLLTIDICIDLLGVKGVAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERSL
TQFLYPQMAKELKNKLIAEAKENIIKSCCRRLYNWLKVAPYRPDQQAEEEDDDLMDESQG
KGIRVLGVAFADGRDTPVFCSLINGEGEVVDFLRLPYFLKRRNAWKEDERDKKLQDIENL
KKFLTSKKPHVVAVAGENRDAHMIMEDIKRTVSELEQESSLPAVGVELVDNELSMLYMNS
TKSQTDFRDYPPLLRQAVSVARKIQDPLVEYAQVCSSDEDILCLKLHPLQEHVVKEDLLS
ALYCEFINRVNEVGVDVNRAISHPYTQSLVQFVCGLGLRKGSHLLKILKQNNTRLENRTQ
LVTMCHMGPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEY
DESAEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKD
LRVPYRAPNTEEVFNLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDATGLW
QCPFCQQDNFPELSEVWNHFDSGSCPGQAIGVRARMDNGVQGFIPTKFLSDKVVKHPEER
VKVGMTVHCRIMKIDIEKFNVDLTCRTSDLMDKNNEWKLPKDSYYDFDTETEDTKTEEER
KKKQQRTTYIKRVIAHPSFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADG
IYQHVDVREEGKENAFSLGHTLWINTEEFEDLDEITARYIQPMAAFARDLLGHKYFQDCN
GGDRKKMEELLIRSKKEKPTFIPYFVSACKDLPGKFILGYQPRGKPRVEYVTISPDGFRY
RSQMFPTVNGLFRWFKDHFQEPVPGITPSSSSRTRTPASVNATPANINIADLTRAVSALP
RNMTSQMFSAIAAVTGQGQGQNANTTPAQWNSSQYGYTGGSSGGGGGSSSAYHVFATPQQ
PMTTPMMTPSYSYTTPSQQTMGTPQYPSSTPQSSHGHTQSSHQGHSSHQGHSSHQGPSSS
SRGRTPQQQPKSSDSTTVDWGKVAEQWLQEKEAERKKQKTPRMTPRPSPSPMIQSTPMSI
AGDATPLLDEMDR
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcatcgatagcgaggctgaggagtcggaggaggagtttgaagagaaagac
ctgaagcctaaaaagacccaggcgtttatggatgatgaggaagaggaggaagagttaaac
acagaggaccaggatgagcacgggaacctgatggggctcatcgacgatgatgtggatgaa
gatgaggaagaggaagagaagaaaagcggaggagcgggcagcggcagcgactcagaggat
gaagtcagacacagacgcaagaaacgcaactatgacgactacctggatgatgatgatctg
gaccttattgaggagaacttgggagtcaaagtcaagaggaggaagaagaagtatgaccgt
gtgaagactatggatgatgatgaagatgacgagaaggaccagatcgcagacgagatcttc
cacagaggagatgacgaggacggagagggggagctggaggagggagagacagtcgacccg
cccctacgtcgccatggtgaacgcctcgatgaggaagaggaagaggagggagaggaggag
tcggatattgatgactttatcgtggacgacgatggccaacctatcaccaagaggagaagc
aagaagttctcaggatacacggacgcagccctccaggaagctcaggagatcttcggcggc
gactttgactttgcggagttcgacgccgacggtgcttatgaacagggtgaggaagaggag
gaggaccaggatgaagagggctgggaccggcccaagaagccaacgaagaggagagtgggg
aggaagagcatcttcgagctctacgagcccagcgagctggagagtagtcacatgactgac
caggacaacgagatccgctccacagacatgccagagaggttccagctgcgctccatccca
gtgaagcctgctgaggatgatgagttggaggaagaggcagagtggatctacagaaacgct
ttctcaacccccaccatctccatgcaggagagtacagattacctggacagagggtccaca
actaactttagcaggaagggccccagcaccatcgccaagattaaggaggccctcaacttc
atgaggaatcagcattttgaggttccgttcatcgcattctacaggaaggagtacgtggaa
ccggagctcaacatcaacgacctgtggaaggtctggcagtgggacgagaagtggtgccag
ctgaagagcaggaagcagaacctgacacgtctgttccggaggatgcaggggtaccagtat
gagcagatctctgccgaccctgacaagcccctggccgacggcatcagacccctggacact
gctgatatggagagactgaaggacgtccagtccatagatgagctgagtgatgtgtatagt
cacttccttctgtactatggccgagacatccccaagatgcagaacgcagccaaggccgcc
agcaagaagaagaagaagaagaagaagaagaagattgaggtcaacgaggaaggtgaggag
gaagaggtggaggaagaggtggaggaggaggaggaagagaaggggcctgacctgaagctg
gcatctcgtagagacatgtacagcatctgtcagagcgccgggctcgatggcctggctaag
aagtttggtctgactccagagcagtttggagagaatctgagggacagctaccagcgtcac
gagacagagcagttccctgccgagcctgtagagttggctaaagactacgtctgcagccag
tttaacagccccgaggcggtgttggaggggacccgttatatggttgcgatgcagattgcc
agggagcctctggtcagacacgtcctcagacagacgttccaggagagagccaagatcaac
atcaagcccaccaagaagggaaagaaggacatggacgaggcccactttggctactccttc
aagtatctgaagaacaagccggtgaaggagctgaacggagaacagttcttaaagatgtgc
caggctgaggaggagggccttctcaccatagacatctgcatcgacctcctaggggtcaaa
ggggttgcaggtgaccagacatactttgatgagatcaagcaattttactacagagatgag
ttcagtcaccaggtgcaggagtggaacagacagaggaccctggccatcgaacgctccctc
acacagttcctctaccctcagatggccaaggaactcaagaacaaactcatcgcggaggcc
aaggaaaacatcatcaagtcgtgttgcaggaggctgtataactggttgaaggtggctccc
tacagaccagaccagcaggcagaggaggaggatgatgatctgatggatgagagtcaagga
aaaggcatcagagtcctgggagtggccttcgcagacggcagagacacgccagtgttctgt
tcactgatcaacggcgagggagaggtggtggacttcctccgtctgccctacttcctgaag
aggaggaacgcatggaaggaggacgagagagacaaaaagctccaggacattgagaacctg
aagaagttcctgaccagtaagaagcctcacgtggtggctgttgccggggagaatagggac
gcccacatgataatggaggacattaagaggacagtgagtgagttggaacaggagtcttct
ctgcctgctgtgggagtggagctggtagacaacgaactgtccatgctctatatgaacagt
accaaatctcagactgacttccgtgactaccctcccctgctgcgccaggcggtgtccgta
gccaggaagattcaggatcctcttgtggagtacgctcaggtctgcagctccgacgaagac
atcctctgcctcaaactacaccctctacaggagcatgtagtgaaagaagacctgctgagt
gctctgtactgtgagtttataaaccgggtcaacgaggtgggggtggatgtgaacagagcc
atctctcacccctacacacagagcctggttcagttcgtctgtggcctcggactcaggaag
ggatcccatctgctcaagattctgaagcagaacaacactcgtctggagaacaggactcag
ctggtcaccatgtgtcacatgggccccaaggtcttcatcaactgtgccggcttcatcaag
atagacaccgcctctctcggtgacagtactgactcatacatcgaggttctggacggttcc
cgggtgcacccggagacatatgagtgggccagaaagatggcggtggacgctctggaatac
gacgagtcagcggaggatgccaacccggccggagcgctggaggaaatcctggaaaacccg
gagcgtctcaaagacctggacctggacgcctttgctgaggagctggagagacagggttac
ggtaacaagggcatcaccctgtatgatatccgtgctgagttgagctgccggtataaggac
ctgagagttccctacagagctcctaacaccgaggaggtgtttaacctgctcaccaaggag
acaccagagaccttctatataggtaagctgatcaccagtgttgtgactggtatagctcac
cggcgcccccagggggagagttatgaccaggccatcaggaacgacgctacaggtctgtgg
cagtgccccttctgtcaacaggacaacttccctgaactcagcgaggtgtggaaccatttt
gacagtggttcgtgtcctggccaggctataggtgtgagggctcggatggacaacggtgtc
cagggcttcatccccaccaagttcctcagtgacaaggtggtcaaacaccctgaggagagg
gtgaaggtgggtatgacggtacactgtcgcatcatgaagattgacattgagaagttcaac
gtggacctgacgtgtcgtacgtctgacctgatggataagaacaacgagtggaagctccct
aaagacagttactacgactttgacacggagacagaggacaccaagacagaggaggaacgc
aagaagaaacagcagagaactacctatataaaacgtgtgattgcccacccatccttccac
aacatcaacttcaagcaggctgagaagatgatggagtccatggaccagggagatgttgtt
atcaggccaagcagcaagggagagaaccaccttactgtcacctggaaggtagctgacggc
atctaccagcacgttgacgtgagagaggagggcaaggagaacgccttcagcctgggacac
acactctggatcaacactgaggagtttgaggatcttgatgagatcacagctcgttatatt
cagccaatggcagcgttcgctcgtgacctgctgggacacaagtacttccaggactgtaac
ggaggggacaggaagaaaatggaggagttgttgatcaggtctaagaaggagaagcctacg
ttcatcccctactttgtctcagcctgtaaagacctgccagggaagttcatactgggatac
cagcctcgtggcaaaccacgtgttgagtatgtgaccatctctcctgacggcttccggtac
cgctcccagatgttccccaccgttaacggactcttccgctggttcaaagaccacttccag
gaaccggtaccaggcatcacccccagcagtagcagtcgaacacggacacctgcctctgtc
aacgctacaccagctaacatcaacatcgcagacctgacgcgagcggtcagcgctctccca
cgcaacatgacctctcagatgttcagtgccatcgccgcggtgacggggcaggggcagggc
cagaacgccaacactacgcctgcccagtggaactccagccaatacggttacaccgggggc
agcagtgggggcgggggaggcagctcctcagcctatcacgtgtttgcgacgccccaacag
ccgatgacgacacccatgatgaccccgagctactcatacaccacccccagccagcagacc
atgggtaccccgcagtacccctcctccaccccccagtcctcccacggacacacacagagc
agccaccagggccacagcagccaccagggccacagcagtcaccagggaccctcgtcttcc
tccagaggacgcactccgcagcagcagcctaagtcaagcgacagcacgacggtggactgg
ggcaaggtggcagagcagtggctccaggagaaagaggcagagaggaagaagcaaaagacc
cccaggatgaccccgcgaccttcccccagccccatgatccagagcacgcctatgtcaatc
gctggcgacgccacgccccttctggacgagatggaccgatag
DBGET
integrated database retrieval system
