Salvelinus fontinalis (brook trout): 129863624
Help
Entry
129863624 CDS
T11136
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1-like isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04210
Apoptosis
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129863624
09142 Cell motility
04820 Cytoskeleton in muscle cells
129863624
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129863624
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129863624
Intermediate filaments
Intermediate filament-binding proteins
129863624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Rop-like
Motif
Other DBs
NCBI-GeneID:
129863624
NCBI-ProteinID:
XP_055791714
LinkDB
All DBs
Position
10:11773997..11844003
Genome browser
AA seq
2505 aa
AA seq
DB search
MATMEIQDLGQQRLPRETMATTSPQRMDTSGGKVLESADDIQERRQQVLDRYRRFKELSG
VRRQKLEDSYRFQFFRRDADELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQA
NAGAIIKLDETGNLMISEGHFASETIRTRLEELHRLWDLLLQKTKEKGVRLLQAQKLVQY
LRECEDALDWICDKEAMATSEELGQDLEHVEVLQKKFEEFQTDLAAHEERVNEVNQLAGK
LSQESHPEAELIVRKQEEVNAAWQRLKGLAQQRQGRLFGAAEVQRFNRDVDETISWIKEK
EQLMASDDFGRDLASVQALLRKHEGLERDLAALEDKVNTLGGEAERLQQTHPQNASQIHL
KRDELITNWEQIRTLAAERHAHLNDSYRLQRYTADFRDLTSWVTEMKALINADELANDVA
GAEALLDRHQEHKGEIDAHEDSFKATDEAGQALLNTGHYALEEVKEKLGVLTEEKESLLE
LWEVRRQQYEQCMDLQLFYRDTEQVDNWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEK
SLSAQEEKITALDEFATKLIQNNHYAKEDVATRRDALLSRRNALHERAQSRRAALEDSFH
LQQFFRDSDELKSWINEKMKTATDEAYKDPSNLQGKVQKHQAFEAELSANQSRIDALQKS
GQELLDGKHYAADEVSVRMDEVSSQWKKLLEATELKGIKLREANQQQQFNRNVEDIELWL
YEVEGHLASDDYGKDLTSVQNLQKKHALLEADVAAHQDRIDGITIQARQFQEAGHFDGDN
IKRKQEALVARYDALRDPMAARKQKLSDSLRLQQLFRDVEDEETWVREKEPIAASTNRGK
DLIGVQNLLKKHQALQAEIAGHEPRIKAVTQKGEAMVEEGHFAGEEVKVKLGELNGRWDT
LKGKAGQRRQDLEDSLQAQQYFADANEAESWMREKEPIVSSPDYGKDEDSAEALLKKHEA
LMSDLSAYGSSIQALKEQAQSCRQQVAPTDDETGKELVLALYDYQEKSPREVTMKKGDIL
TLLNSTNKDWWKVEVNDRQGFVPAAYVKKLDPTQSSSRENLLDDQGSIGLRQDQIENQPG
AKETCSVSVRMKQVEELYGTLLELGEKRKDMLGKSCKKFMLFREANELQQWINEKEGALT
NEEVGSDLEQVEVLQKKFDDFQKDLKANESRLRDINKVASELESEGLMAEEAHMVQAQEQ
VMVGSVPGKDDTDSKNASPWKNVRVAVQTTANFNTIKELNNRWRSLQQLAEERSNMLGSA
HEVQRFHRDADETKEWIEEKNQALNTENYGHDLASVQALQRKHEGFERDLAALGDKVKSL
GETAERLIQSHPEAVDDIQEKCTELNTAWSSLVARADQRKDKLGNSHDLQRFLSDFRDLM
SWINGIRSLVSSEELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYA
SPEIQQKLEALDHERADLEKAWVQRRMMLDQCLELQLFNRDCEQAENWMAAREAFLASDD
KGDSLDSVEALIKKHEDFDKAINVQEEKIAALQSFADQLVGADHYAKPEIFKRRNEVLDR
WRRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQTATDESYKDPTNIQLSKLLS
KHQKHQAFEAELHANADRIRGVIDTGNALIQRGACAGSEDAVQSRLGALDEQWQFLVNKS
AEKSQKLKEANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADI
SAHEDRLKDLNGQADSLTASTAFDPTQVKDKRNAVNGRFAKIKSMAAGRRAKLNESHRLH
QFFRDLDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELGAHEPAIQSVQDTG
KKLSDDNTIGQEEIEQRLGQFEEHWTELKDLAAARGQRLEESLEYQQFVANVEEEEAWIN
EKLNLVGSEDYGDTLAAVQGLLKKHEAFETDFTVHRDRVNDVCSNGDELINKNNHHVDSI
SAKITSLRGKVSELERAAAMRKAKLDENSAFLQFNWKADVVESWIGEKENSLKTDDYGRD
LSSVQTLLTKQETFDAGLQAFQQEGITNITALKDQLLAAKHVQSKAIEARHAALMKRWNQ
LLDNSQARKKKLLEAQDHFRKVEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIR
ALRDAHEAFRSSLSSAQADFNQLAELDRQIKSYQVVSNPYTWFTMEALEETWRNLQKIIK
ERELELQKEQRRQEENDKLRQEFAQHANAFHQWLQETRTYLLDGSCMVEESGTLESQLEA
TKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHN
LEQQIQARNTTGVTEDALKEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEP
DPEFESILDTVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESAFRALSVDAKPYVTKE
ELYQNLSKEQADYCISHMKPYLDSKGREMPSAFDFVEFTRSLFVN
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggaaatccaagacctagggcaacagcgtctgcctagggagacgatggcc
accacctctcctcagagaatggataccagtggtgggaaagtgctggagtctgccgatgac
atccaggagcgtcggcagcaggtgttagaccgctaccggcgcttcaaggagctgtcgggt
gtgcgccggcagaagctggaggactcctaccgtttccagttcttccgccgcgatgccgat
gagctggagaagtggatccaggagaagctgcagatcgcctccgatgagaactacaaggac
cccaccaacctccagggcaagctccagaaacaccaggccttcgaggcggaggtgcaggcc
aacgctggggccatcatcaagcttgacgagactggcaacctcatgatctccgagggtcac
tttgcctctgaaaccatccgcactcgtctggaggagctgcaccgtctttgggacctgctg
ctgcagaagaccaaggagaaaggtgttcgtctgctgcaggcccagaagctggtgcagtac
ctgcgcgagtgtgaggatgccctggactggatttgtgacaaggaggccatggccacctcg
gaggagctgggccaggacttggagcatgtggaggtgctccagaagaagtttgaggagttc
cagacggacctggcggctcacgaggagcgtgtgaacgaggtgaaccagctagcgggcaag
ctgagccaggagtctcaccccgaggcggagctcatcgtccgcaagcaggaggaggtgaac
gccgcctggcagaggctcaagggcctggcgcagcagaggcagggcaggctgtttggagcc
gccgaggtgcagcgcttcaacagggatgtggacgagaccatcagctggatcaaggagaag
gagcagctcatggcgtccgatgactttggccgggacctggccagcgttcaggccctgctg
cgcaagcacgagggcctggagagagacctggctgccctggaggacaaggtcaacactctg
gggggagaggctgaacgtctgcagcagacccacccccagaacgcttcccagatccacctg
aagagggacgagctcatcaccaactgggagcagatccgcacgctggccgctgagcgccac
gcccacctcaacgactcctacaggctgcagcgctacactgcagacttccgtgacctgacc
agctgggtgacggagatgaaggccctgatcaatgctgacgagctggccaatgacgtggcc
ggagccgaggctctcctcgaccgccaccaggagcacaagggtgagattgatgcccatgag
gacagcttcaaagccacggacgaagccggtcaggccctgctcaacaccggacactacgcc
ttagaggaggtcaaggagaagctgggtgtcctgactgaagagaaggagtctctgctggag
ctgtgggaggtgcgcaggcagcagtacgagcagtgcatggacctgcagctcttctacagg
gacacagagcaggtcgacaactggatgagcaagcaagaggctttccttctgaacgaggac
cttggtgactctctggacagcgtggaggccttgcttaagaaacacgaggactttgagaag
tccctcagcgcccaggaggaaaagatcactgccctggatgaatttgccaccaaactgatc
cagaacaaccactatgccaaggaggatgttgctactcgtagagatgctctgctgagccgc
cgcaacgccctgcacgagcgtgctcagtcacgccgcgccgctctggaggactcgttccac
ctgcagcagttcttccgtgactcggacgaactcaagagctggatcaatgagaagatgaag
acggccaccgacgaagcctacaaggacccgtccaacctgcagggcaaggtccagaagcac
caggccttcgaggcggagctgtcagccaaccagagccgcatcgatgctctgcagaagtct
ggccaggagctcctagacgggaagcactacgccgccgacgaggtgtctgtacgcatggac
gaggtcagctcccagtggaagaagctgctggaggccaccgaactcaaaggcatcaagctg
cgcgaggccaaccagcagcagcagttcaacagaaacgtggaggacattgagctgtggctg
tatgaggtcgagggccacctggcgtcagatgactacggcaaggatctgaccagcgtccag
aacctgcagaagaagcacgccctgctggaggctgacgtggctgcccaccaggaccgcatc
gacggcatcaccattcaggcgcgtcagttccaggaagccggtcactttgacggcgacaac
atcaagcgcaagcaggaggcgctggtggcgcgctacgatgccctccgcgaccccatggcc
gcccgcaagcagaagctgtcagactccctgcggttgcagcagctcttcagggacgtggag
gacgaggagacctgggtccgggagaaggagccaatcgccgcctccaccaaccggggaaaa
gacctgatcggcgtccagaacttgctgaagaagcaccaggccctgcaggcggagatcgcc
ggccatgagccccgcatcaaggccgtcacccagaaaggagaggctatggtggaggaaggc
cactttgctggggaggaggttaaggtgaagctgggggagctgaacggccgctgggacacc
cttaaaggcaaggccgggcagcgcaggcaggacctggaggactcactgcaggcacagcag
tacttcgccgacgccaacgaggcagagtcctggatgagggagaaagagcccatcgtgagc
agtcccgactacggcaaggatgaggattcggctgaggccctgctgaagaagcacgaagcc
ctgatgtctgacctgagtgcttatggcagcagcatccaggctttgaaggagcaggcccaa
tcctgcaggcaacaagttgcgcccaccgatgatgagactggcaaggagctggtgctggcc
ctctatgactaccaggagaagagcccccgtgaggtcaccatgaagaagggagacatcctc
accctgctcaacagcaccaacaaggactggtggaaggtggaggtgaatgaccgccagggc
tttgtgcccgcagcctacgtcaagaagctagaccccacccagtcctcctccagggagaac
ctgctggacgaccagggcagcatcggcctccgccaggaccagatcgagaaccagccgggg
gcaaaggagacgtgcagtgtgtctgtacgcatgaagcaggtggaggaactgtacggcact
ctcctggagctgggcgagaagcgcaaggacatgctaggaaagagctgcaagaagttcatg
ctgttccgcgaggctaacgaactgcagcagtggatcaacgagaaggagggcgccctcacc
aacgaggaggtgggctccgacctggagcaggtggaggtgctgcagaagaagtttgacgac
ttccagaaggacctgaaggccaacgagtctcgtctgagggacatcaacaaggtggcatct
gagctggagtctgagggcctaatggcagaggaggcacacatggtccaagctcaggaacaa
gtaatggtgggttccgttcctggcaaggatgataccgactccaaaaatgcttcaccatgg
aagaatgtacgcgtggctgttcaaacgacagctaactttaatactatcaaggagctgaac
aaccgctggaggtccctgcagcagctggctgaggagagaagcaacatgctggggagtgcc
catgaggtgcaaaggttccacagggatgcggatgagaccaaggagtggatcgaggagaag
aaccaggccctgaacacagaaaactacggccacgacctagctagcgttcaggctctgcag
cgcaaacatgagggctttgagagagacctggccgccttgggagacaaggtgaagtctctg
ggggagacggcggagcgtctgatccagtcccacccggaggctgtggacgacatccaggag
aagtgcacagagctcaacacggcctggagcagcctagtggcgcgtgccgaccagcgcaag
gacaagctgggcaactcccacgacctgcagcgcttcctctccgacttcagggacctgatg
tcctggattaacggcatccgaagcttggtctcctcagaggaactggccaaagatgtgacc
ggggctgaggccctgctggagagacaccaggagcaccgtactgagatcgacgcccgtgcg
ggcaccttccaggcctttgagcagtttggccagcagctgttggcacgcggccactacgcc
agtccggagatccagcagaagctggaggccctggaccacgagagggccgacctggagaag
gcctgggtccagagacgcatgatgctcgaccagtgcctggagctccagctgttcaaccgt
gactgtgagcaggctgagaactggatggcagcgcgcgaggccttcctagccagcgacgac
aagggcgactccctggacagcgtggaggccctcatcaagaaacacgaggactttgacaag
gccatcaatgtgcaggaggagaagatcgctgccctgcagtcctttgctgaccagctggtc
ggcgctgaccactacgccaagcctgagatcttcaaacgtcgcaacgaagtcctggacagg
tggcgccgtctgaaggcccagatgattgagaagcgttccaagctgggcgagtcccagacc
ctgcagcagttcagccgtgatgtggatgagattgaggcctggatcagcgagaagctgcag
acggccaccgacgagtcctacaaggaccccaccaacatccagttgtccaagctgctgagt
aagcaccagaagcaccaggcctttgaggcggagctgcacgccaacgcagaccgcatccgt
ggggtcatcgacacaggaaacgccctcatccagagaggggcctgcgccggcagtgaggac
gcagttcagtcgcgtctcggtgccctggatgagcagtggcagttcctggtgaacaagtca
gcagagaagagccagaagctcaaggaagccaacaagcagcagaacttcaacactggcatc
aaggactttgacttctggctatctgaggtcgaggcccttcttgcgtctgaggactatggc
aaagacctggcctcagtcaacaacctgctgaagaaacaccagcttctggaagccgacatc
tctgctcatgaggatcgcctgaaggacctgaacggccaggccgacagcctgacggccagc
acagccttcgaccccacccaggtcaaggacaagcgcaacgccgtcaacggacgcttcgcc
aagatcaagagcatggctgccggccgccgcgccaagctcaacgagtctcaccgcctgcac
cagttcttcagggacctggacgatgaggagtcttggataaaagaaaagaaattgctagtg
agttcggaagactatggacgtgatttgacaggagtgcagaatctgaggaagaaacacaag
aggctggaggctgagctgggggcccacgagccagccatccagtctgtgcaggacactggg
aagaagctgtctgatgacaacaccatcggccaggaggagattgagcagaggctgggccag
tttgaggagcactggacggagctgaaggacctggctgcagcaaggggacagcggctggag
gagtcgctggaataccagcagtttgttgcgaatgttgaagaggaggaagcctggattaac
gagaagctgaatctggtgggaagcgaagactacggggataccctggccgccgtgcagggc
ctgttgaagaagcatgaggcgtttgagactgacttcaccgtgcacagggacagagtgaat
gatgtgtgttccaacggagacgagctcatcaacaagaacaaccaccacgtggacagcatc
tcagccaagataacgtccctgcggggcaaggtgtctgagctggagagggccgctgccatg
aggaaagccaagctggacgagaactctgccttcctgcagttcaactggaaggccgacgtg
gtggagtcctggatcggtgagaaggagaacagcctgaagactgatgactacggacgagat
ctctcctctgtgcagacgttgctcactaagcaggagacgtttgacgctggtctgcaggcc
ttccagcaggagggcataaccaacatcacggccctcaaggaccagctgctggcggccaag
cacgtccagtccaaggccattgaggcccgccacgccgccctcatgaagcgctggaaccag
ctgctagacaactcacaggctcgcaagaagaagctgctggaggcccaggatcacttcagg
aaggtggaagacctgttcctgacctttgccaagaaggcatcggccttcaatagctggttt
gagaatgcagaggaggacctgacggacccggtgcgctgcaactcgctggaggagatccgg
gctctgcgcgatgcccacgaggccttccgctcgtcgctgagctcggcgcaggccgacttc
aaccagctggctgagctggaccggcagattaagagttaccaggtggtgtccaacccctac
acctggttcaccatggaggccctggaggagacctggagaaacctgcagaagatcatcaag
gaacgagagctagagttgcagaaggagcagaggaggcaggaggagaacgacaagctgcgg
caggagtttgcgcagcatgccaacgcattccaccagtggctgcaggagaccaggacatat
cttctggatgggtcctgtatggtagaagagtccggaaccttggaatcacagcttgaggca
accaagcgtaagcaccaggagatccgggccatgcgcagccagctgaagaagatagaggac
ttgggagcggccatggaggaagcattgatcctggacaacaagtacacagaacacagcacg
gtgggcctggcccagcagtgggaccagctagaccaactaggcatgaggatgcagcacaac
ctggagcagcagatccaggctaggaacaccactggagtgacagaggatgccctgaaggag
ttcagcatgatgttcaagcattttgacaaagagaagtctggccgtttaaaccatcaggag
ttcaagtcgtgtctgcgctcgctgggttacgacctgccaatggtggaagagggagaacca
gaccccgagtttgagtccatcctcgacacggtcgatcccaacagggatggcaacgtgtcc
ttgcaggagtacatggctttcatgatcagccgcgaaacagagaacgtaaagtccagcgag
gagattgagagcgccttccgagccctcagcgtcgatgccaagccctacgtcaccaaggag
gagctctaccagaacctgagcaaggaacaggcagactactgcatctcgcacatgaagccc
tacctagacagcaagggccgggaaatgccctctgccttcgactttgttgaattcacccgc
tcgcttttcgtcaactga
DBGET
integrated database retrieval system
