Salvelinus fontinalis (brook trout): 129863693
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Entry
129863693 CDS
T11136
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sfon
Salvelinus fontinalis (brook trout)
Pathway
sfon04137
Mitophagy - animal
sfon04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129863693
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129863693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129863693
03009 Ribosome biogenesis [BR:
sfon03009
]
129863693
04131 Membrane trafficking [BR:
sfon04131
]
129863693
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129863693
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
129863693
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
129863693
Membrane trafficking [BR:
sfon04131
]
SNARE
SNARE associated proteins
Others
129863693
Autophagy
Aggrephagy
Other aggrephagy associated proteins
129863693
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129863693
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
AAA_28
Vps4_C
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
ATPase
AAA_18
DUF815
ABC_tran
IstB_IS21
NB-ARC
TsaE
AAA_24
nSTAND_NTPase5
ResIII
NACHT
Viral_helicase1
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
129863693
NCBI-ProteinID:
XP_055791833
LinkDB
All DBs
Position
10:15661777..15693971
Genome browser
AA seq
804 aa
AA seq
DB search
MASGGELKNDLSTAILKQKTRPNRLVVDESLNEDNSVVSLSQTKMDELQLFRGDTVLMKG
KKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDD
TVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPNPYCIVAPDTV
IHCEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGI
LLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAII
FIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFG
RFDREVDIGIPDATGRLEILQIHTKNMKLSDDVDLEQVANQTHGHVGADLAALCSEAALQ
AIRKKMDLIDLEDETIDAEVMSSLAVTMDDFRWALSQSNPSALRETVVEVPNISWEDIGG
LEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFIS
IKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVI
NQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRINILSANL
RKSPIAKDVDLDFLAKMTNGFSGADLTEICQRACKMAIRESIENEIRRERERQTNPLAME
VEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPTSSAPGAG
PSQGSAGGSGGTVFNEDNDDDLYG
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggaggagaattgaaaaatgatctatccacagcgattttaaagcagaagacc
agacccaaccggttagttgtggatgaatctctcaatgaggacaacagtgtggtttctctg
tctcagacaaagatggatgagctgcagctgttcaggggagacacagtgctgatgaaagga
aagaagagacgggagacggtatgcatcgtgctctctgacgacacctgctccgacgagaag
gtccgcatgaacagagtggtccgcaacaacctgagagtccgcctgggagatgtcatcagt
attcagccatgcccagatgtgaagtacgggaagcggatccatgttctgcccatcgatgac
actgtagaggggatcacagggaacctgtttgaggtctacctcaagccctacttcctggag
gcctacaggcccatcaggaaaggggacattttcctggtgaggggaggcatgcgtgcggtg
gagttcaaggtagtggagacggatcctaacccctactgcatcgtggccccagacactgtc
atccactgtgagggcgagcccatcaaacgagaggatgaggaggagtctctgaatgaggtt
ggctatgatgacattgggggtgtgaggaagcagctggcccagattaaggagatggtggag
ctgcccctgagacacccagcacttttcaaggccatcggcgtcaagcctccaaggggtatc
ctgctgtatggaccccctggaacaggaaagacactgattgcccgtgccgtggccaacgag
actggagccttctttttccttatcaatgggcccgagatcatgagtaaactggctggagag
tctgagagtaacctgaggaaggccttcgaggaggctgagaagaatgcccccgccatcatc
ttcattgacgagctggacgccattgcaccaaaaagagaaaagacacacggtgaggtggag
aggcgcattgtgtcccagctcctcacactcatggatggcctaaagcagcgcgctcacgtc
atcgtcatggcagccaccaacaggcccaacagcattgaccccgccctgaggcgatttggg
cgttttgacagggaggtggacatcggcatccctgacgccacaggcagactggagatcctg
cagatacacaccaagaacatgaaactgtccgacgacgtggacctcgagcaggttgccaat
cagactcacggccatgtgggtgctgacctggccgctctgtgctctgaagccgccctgcag
gccatcaggaagaagatggatctcatcgacctggaggacgaaacaatcgacgcggaggtc
atgagctccctggctgtcaccatggatgacttcagatgggctctaagccagagcaacccg
tcagccctgagagagacggtggttgaggtgccaaacatcagctgggaggacatcggaggt
ctggaggacgtcaagagggaactccaggagcttgtacagtacccagtggagcacccagac
aagttcttgaagttcggcatgaccccgtccaagggcgtgctgttctacgggcccccaggt
tgtggtaagaccctgctggccaaagctatcgccaacgagtgccaggcgaacttcatctcc
atcaaaggacctgagctgctcaccatgtggttcggagagtccgaggccaacgttcgtgag
atcttcgacaaggctcgtcaggccgccccctgcgtgcttttctttgacgagctggactcc
atcgccaaggcacgtggcggcaacgtgggtgatggcggcggcgcggccgaccgcgtcatc
aaccagatcctgacagaaatggacggcatgtccagcaagaagaacgtcttcatcatcggt
gccaccaacaggcctgatatcatcgacccggccatcctgaggcccggaagactggaccag
ctcatctacatccccctgccagacgagaagtcccgcatcaacatcctcagcgccaacctc
aggaagtcacccatcgccaaggatgtggacttggatttcctggccaagatgaccaatggt
ttctctggcgctgacctgacagagatctgtcagagggcctgtaagatggccatcagggag
tccattgagaatgagatcaggagggagagagagcggcagaccaaccccttagccatggag
gttgaggacgaccctgtcccagagatccgtaaagaccattttgaggaggccatgcgtttc
gcccgccgctcagtcagcgacaacgacatccgcaaatacgagatgttcgcacagacgtta
cagcagagcagaggcttcggaagcttccggttccccactagctctgcgccaggcgctggg
cccagccagggctctgctggtggcagcggtggtacagtcttcaacgaggacaacgacgac
gacctctatggttaa
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