Salvelinus fontinalis (brook trout): 129863832
Help
Entry
129863832 CDS
T11136
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
sfon04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129863832
04518 Integrin signaling
129863832
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129863832
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sfon00536
]
129863832
Glycosaminoglycan binding proteins [BR:
sfon00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129863832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_TEN
fn3
EGF_Teneurin
EGF_2
Fibrinogen_C
EGF_Tenascin
DUF7949
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
Pur_ac_phosph_N
EGF
FN3_Tor_3rd
Fn3_Dep-1_1st
hEGF
EGF_integrin
Motif
Other DBs
NCBI-GeneID:
129863832
NCBI-ProteinID:
XP_055792104
LinkDB
All DBs
Position
10:22277655..22347368
Genome browser
AA seq
2029 aa
AA seq
DB search
MGTKSFLGCVFLTLLLNLCQAGLVRNLLRHKRATLTTPGENNVTLTSADQPVVFNHVYNI
NVPSGSLCSVDLDALGSTSLKPQDAAPPSGLRTTEHTLDGQNQIVFTHRINIPQQECACT
DGLPDLKDLLSRLEMLEGEVSTLRDQCASGDAGCCNVQPVTGEVGTKPYCNGRGNYRADT
CGCICEPGWKGPNCTESECPNNCQDQGRCVDGKCVCFEGFGRDDCSLKVCKVDCGGNGQC
IGGVCVCAKGYTGEDCSQTDCLNNCLGRGKCVDGECVCEEPWTGYDCSELICPNDCYDRG
RCVNGTCYCEEGFTGVDCGEKTCPSDCLGNGFCVDGQCVCSAGYTGEDCSKLTCPSDCND
RGVCFNGMCICNAGYQGEDCSQLACPNNCHNRGQCVNGQCVCNVGYQGEDCSELSCPNNC
QDQGRCVDGKCVCFEGFGRDDCSLKVCKVDCGGNGQCIGGVCVCAKGYTGEDCSQTDCLN
NCLGHGKCVDGECVCEEPWTGYDCSELICPNDCYDRGRCVNGTCYCDEGFTGEDCGEKTC
PSDCLGNGFCVDGQCVCSAGYTGEDCSKLTCPSDCNDRGVCFNGMCICNAGYQGEDCSQL
ACPNNCHNRGQCVNGQCVCNVGYQGEDCSELSCPNNCLNRGRCVNGQCVCDEGFGGEDCS
IKICPSDCYGSGDCVDGRCVCYAGFTGEDCSELSCPNNCLNRGRCVDGQCVCDEGFTGED
CTEKHCPNDCLDRGYCVDGKCVCMEGYAGVDCSELTCPDNCNNRGHCVNGKCMCEERYMG
DNCGELSCLNNCQDMGRCVNGQCLCDEGYIGEDCSEVSPPKDLTVTEVTTETVDLTWNNE
MLVTEYLIAYVPTSPGGLYQEFRVPGDRTAATVSELEPGIEYLINVYAILSNKKSIPISA
RVATNLPEPDGLKFKSVRDTSVEVLWDQLDIPFDAWELYVRNTKEENGKILTTLPSSQTM
YEQSGLGPGQEYEVSVGIIKNNTRGPQSTKIITTRIDGPRQVEVRDVTDCSGLVTWFQPV
AQVDGVTVSYGPSSQPTERTSVDLSTSDKQYSIDSLSPDTEYQVSLISRRGDTTSEPVSE
IFTTDLDAPKDLQPLGQTDDSVTLEWRNSRADVDSYRVKYSPISGGSHGEEVFPRGSGDN
TEATITGMKPGTEYGIGVTAVKNERESLPATTNAATDLDGPKDLEVSESTETSMTLVWRT
PRAKITIYRLVYISRDGRREEVEVPGTATTYVLNNLTPGMLYTITLVAERGSKKSTPITL
SASTDLDAPKDLQPLGQTDDSVTLEWRNSRADVDSYRVKYSPISGGSHGEEVFPRGPGDN
TQATITGMKPGTEYGIGVTAVKNERESLPATTNAATDLDGPKDLEVSESTETSMTLVWRT
PRAKITIYRLVYISRDGRREEVEVPGTATTYVLNNLTPGMLYTITLVAERGSKKSTPVTL
SASTEDLRPVVANLTVSDVTWDSFNVSWTPEDGEFESFVIEVTNLQEGLESENLTLSGDA
FSLGISGLSPNTSYRIGLYGLHKGSFQEPVYTEVTTGLGAPRGIRFSEVTESSAIVHWTM
PRARVDSYRIIYVPLQGGSPMTVLADGTETQALLPNMLPGVTYQVTIFSMKGLEESDPGT
DTITTALDRPQGLSAVNVTDTTALLLWQPTRATVDGYVITYSADSVSPVMEHVSGNTVEF
EMGSLVPATHYTVGVYAMREALKSGTTTTEFTTDVDSPRDLAASNVQTDSATLTWKPPRA
DITGYVLTFTSSDSTVREVVLSPTATSYSMTQLSGTTDYNVRLQAIAGAQRSRHVTTVFT
TIGVLYRYPKDCSQALLNGDTTSGIYTIYVGGEESQPIQVYCDMTTDGGGWMVFLRRQSG
KLEFFRNWKNYTGGFGDINGEFWFGLANLHKMTTAGQYELRVDLRDNGESAYAQYDKFTI
AEPRSRYKIHIGGFSGTAGDSMTYHQGRPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRV
NLMGRYGDDSHSKGINWFHWKGHEHSIQFAEMKIRPVNFRNFESRRKRS
NT seq
6090 nt
NT seq
+upstream
nt +downstream
nt
atgggtactaaaagctttttagggtgtgtcttcctgactctccttctcaacctctgccag
gctgggctggtgagaaatttacttaggcataaacgggcgaccttgactacccctggcgaa
aacaatgtgaccctgaccagcgctgaccaaccagtggtcttcaaccacgtctacaacatc
aacgtcccttccggctcactatgctcagtggacctggatgccctaggaagcaccagcctc
aagccccaggacgcagctccaccttcaggcctccgcaccaccgaacataccctggatggg
cagaaccagatagttttcactcaccgcattaacattcctcagcaggagtgtgcatgcact
gatgggctcccggatctgaaggacctcctgagcagattggagatgctggagggagaagtg
tccacgctgagagatcaatgcgctagtggagacgctggctgctgcaacgttcagccagtc
acaggtgaggtggggaccaagccttattgcaatggccgtggcaactacagagctgacacc
tgtggttgcatttgcgagcctggctggaagggacccaactgcaccgagtctgaatgcccc
aacaactgccaggaccaaggtcgctgtgtggatgggaagtgcgtctgctttgagggcttt
ggcagggacgactgttcactaaaggtttgcaaagtggactgtggtgggaacggacaatgt
attggtggggtctgtgtctgtgccaagggttacactggagaggactgttctcagacagac
tgcctgaacaactgcctaggccgtggaaagtgtgtggatggggagtgtgtgtgtgaagag
ccctggacgggctacgactgctccgaactcatctgccccaatgactgctacgaccgcggt
cgctgcgtcaatggaacctgctactgcgaagaaggattcaccggggtggactgtggggag
aaaacctgcccaagcgactgcctgggaaatggtttctgtgtggacggccagtgtgtctgc
agcgctggctacactggagaggactgctctaagctcacctgccccagtgactgcaacgat
agaggtgtctgctttaatggaatgtgtatctgtaatgctggctaccaaggagaggattgt
agccagctggcttgccccaacaactgccataacaggggacagtgtgtcaacgggcagtgc
gtctgcaatgtaggctaccagggagaggactgttctgagctctcctgccccaacaactgc
caggaccaaggtcgctgcgtggatgggaagtgcgtctgctttgagggctttggcagggac
gactgttcactcaaggtttgcaaagtggactgtggtgggaacggacaatgtattggtggg
gtctgtgtctgtgccaagggttacactggagaggactgttctcagacagactgcctgaac
aactgcctaggccatggaaagtgtgtggacggggagtgtgtgtgtgaagagccctggacg
ggctacgactgctccgaactcatctgccccaatgactgctatgaccgcggccgctgcgtc
aatggaacctgctactgcgatgaaggattcaccggagaggactgtggggagaaaacctgc
ccaagcgactgcctgggaaatggtttctgtgtggacggccagtgtgtctgcagcgctggc
tacactggagaggactgctctaagctcacctgccccagtgactgcaacgatagaggtgtc
tgcttcaatggcatgtgtatctgcaatgctggctaccaaggagaggattgtagccagctg
gcttgccccaacaactgccataacaggggacagtgtgtcaacgggcagtgcgtctgcaat
gtaggctaccagggagaggactgttctgagctctcctgccccaacaactgcctcaaccgg
ggccgctgtgttaacggacagtgtgtgtgcgatgaagggttcggtggtgaggactgcagc
atcaagatctgcccctcagactgctatggcagtggagattgtgtggatggccggtgtgtc
tgctatgctggcttcaccggtgaggactgcagcgagctgagctgccccaacaactgcctg
aaccgcggacgctgcgttgacgggcagtgcgtctgcgacgagggctttacaggggaagac
tgcactgagaagcactgtcccaatgactgcctggacaggggatactgcgtggatggcaaa
tgtgtctgcatggagggctatgcgggtgtcgactgctctgaactcacctgccctgataac
tgcaacaacagggggcactgtgttaatgggaagtgcatgtgtgaggagcgatacatggga
gacaactgtggagagctgagctgcctcaacaactgccaggacatgggccgctgtgtgaat
ggacaatgtctctgtgatgagggatacatcggagaagactgctcagaagtttcacctcca
aaggacctgactgtaacagaggtcaccaccgagacagtggatctgacctggaacaacgag
atgctggtgacagagtatctgattgcatatgtgcccactagtcctgggggtctgtaccag
gagttcagagtgcccggagacaggactgctgccacagtcagcgagctggagcccggcatc
gagtacctgatcaacgtctatgccatcctcagcaacaagaagagcatcccaatcagcgcc
agggtggccacaaatctaccagagccagatggcttgaagttcaaatcggtgagggacacc
tcagtagaggtgttgtgggatcagctggacattccctttgatgcctgggagctctatgtc
cgtaacacgaaagaggagaatgggaagatcctgacaacccttccatcctcccagactatg
tatgagcagtccgggcttggtcctggtcaggagtacgaggtctcagtgggcatcatcaag
aacaataccagaggacctcagtctactaaaatcattaccaccaggattgatggccccaga
caggtagaggtgcgtgacgtgacggactgctcaggcttggtcacctggttccagcccgtg
gcccaggtggacggtgtcactgtgtcctatggccccagctcccagcccacagagaggacc
agcgtggacctttccacctcagacaaacagtatagcatcgacagcctcagcccagacact
gagtaccaggtgtccctgatctccaggaggggagacaccaccagtgagccagtctctgag
atattcaccacagacctggacgcccccaaggacctgcagcccctgggccagacagacgat
agcgtcacactggagtggagaaacagccgggcagatgttgacagctacagggtgaagtac
agccccatctctgggggttcccatggcgaggaggtgttcccccgtgggtcaggagacaac
actgaggccaccatcactggaatgaaaccgggtacagaatacgggattggtgtgaccgca
gtgaagaacgagagggagagccttcctgccactacaaacgcagccaccgatctcgatggg
cccaaggacttggaagtgagcgagtccacagagacaagcatgaccctggtgtggaggaca
cccagagccaagatcaccatctacaggctggtgtacatctccagggacggtcgaagggag
gaggtggaggtccctggaactgccaccacctacgtcctgaacaacctgacccccggcatg
ctgtacaccattaccctggtcgctgagaggggctcaaagaagagcacacccataaccctg
tccgcatctacagacctggacgcccccaaggacctgcagcccctgggccagacagacgac
agcgtcacactggagtggagaaacagccgggcagatgttgacagctacagagtgaagtac
agccccatctctgggggttcccatggcgaggaggtgttcccccgtgggccaggagacaac
actcaggccaccatcactggaatgaaaccgggtacagaatacgggattggtgtgaccgca
gtgaagaacgagagggagagcctgcctgccactacaaacgcagccaccgatctcgatggg
cccaaggacttggaagtgagcgagtccacagagacaagcatgaccctggtgtggaggaca
cccagagccaagatcaccatctacaggctggtgtacatctccagggatggtcgaagggag
gaggtggaggtccctggaactgccaccacctacgtcctgaacaacctgacccccggcatg
ctgtacaccattaccctggtcgctgagaggggctcaaagaagagcacacccgtaaccctg
tccgcatctacagaggacctgaggcctgtggtggccaacctcacagtctctgacgtgaca
tgggacagcttcaatgtgtcctggactcccgaggacggggagtttgagagctttgtcatt
gaggtgacaaacttacaggaaggtttagagagcgagaacctcaccttgtctggtgatgcc
ttcagcctgggcatttctggcctgagtcctaacacctcgtataggattggcctgtacggg
ctccacaagggctccttccaggagccggtgtataccgaagtcactacaggcctgggcgct
ccaaggggcatccgcttctctgaggtgaccgagtcctcggccatagtccactggaccatg
cctcgtgccagagtggacagctaccgcatcatctatgtgcccctccaaggaggtagccca
atgacagtgctagcggatgggactgagacccaggccttgctgcctaacatgttgccaggg
gtgacctaccaggtgaccatattctccatgaagggcctggaggagagtgacccagggaca
gacaccatcaccacagctctggacaggcctcagggtctttctgctgtcaacgtcactgac
acgaccgccctgctgctatggcaacccactcgggccactgtcgatggctacgtcatcacc
tacagtgcagattcagtgtccccagtgatggagcatgtttctgggaacacagtggagttt
gagatgggctctctggtccctgccacccattacacagttggggtatacgccatgagggag
gcactgaagagtggcaccaccaccaccgaattcaccacagatgtggattctcctcgtgac
ctggcagccagtaacgtccagacagacagtgccactctcacttggaagcccccgcgtgcc
gacatcaccggatacgtcctcaccttcacctcatctgacagcacagtccgggaagtggtt
ctgagccctacagccacatcatacagcatgactcagctgagtggcactaccgactacaac
gtcaggctacaggccatcgctggagcccagcggagccgccacgtcaccaccgtcttcacc
accatcggagtgttgtacagataccctaaggactgctcacaggctctgctgaatggagac
accacctctggcatctacaccatctacgtgggaggagaagagagccagcccatccaggtc
tactgtgacatgaccaccgacggaggtggatggatggtgttcctgaggcgccagagtgga
aagctagagttcttcaggaactggaagaattacactggtggctttggggacattaatggt
gaattctggtttggtctagccaacctccacaagatgacaacagcaggccagtacgagctg
cgtgtggacctgagggacaacggggagtcggcctatgctcagtatgacaagttcacgatc
gcagaaccccgtagccgctacaagatccacataggagggttcagcggcacagcaggtgac
tcgatgacttatcaccagggccggcccttctccacgtatgacaatgacaatgacatcgct
gtcaccaactgtgccctgtcctataagggtgccttctggtacaagaactgccatcgtgtc
aaccttatgggaagatatggtgacgatagtcacagcaagggtatcaactggttccattgg
aagggacacgagcattcaatacagttcgccgaaatgaagattagaccagtcaacttcaga
aactttgaaagtcgaaggaaaagatcatag
DBGET
integrated database retrieval system
