KEGG   Salvelinus fontinalis (brook trout): 129863958
Entry
129863958         CDS       T11136                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129863958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sfon03041]
    129863958
   04121 Ubiquitin system [BR:sfon04121]
    129863958
Spliceosome [BR:sfon03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    129863958
Ubiquitin system [BR:sfon04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    129863958
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 129863958
NCBI-ProteinID: XP_055792409
LinkDB
Position
10:complement(29255179..29261936)
AA seq 780 aa
MGSSKKHKEKGRDKDKDAEERGHREHKKHRHKDRERDKERDSNREREKRKRSRSKERSGR
GSERDGRSKGERSTGEPRVKKEKVEPGCEGTEIAPQSASGDASLTIEETNKLRAKLGLKP
LEMTDTTKELGTKEQPIVAETINPVYIKQQKEMREKLAALKEKRLLNKKLGKVKTLAEED
WLDDTVAWVERSRKMAKEKELAEKRAKLLQEMDEEFGVSNLVEEEFGQTNKAAYSSRDLK
GLTVQHKMESFNEGETVILTLQDKGVLDEEGGDVLVNVSLVDKENAEKNVELKKKKPDYK
AYEEDESVDDMVTFKPRTVLGKYDEEIDGEKKKSFRLSKGGCAEGERERELLAIRETLRN
QAQSLEMPALAIASEYYTPQEMVGFKKTKQRVRKIRKKEKALPDELQLDDTRNTDFGSRA
RGRGRKQLDEEGQEGVKERVIIPGLDVPQQSDDIRMADMDISDDENFTPPDPAVLEEDEA
EQELQKQLEKQRKLKQKQLLKNSGEKVAEQVRGLARVDDSDDEEDKNNLNIVFNATSEFC
RTLGDIPTYGLSGNREDQEDIMDFEQEAERDGAGGSDSDGDENVGWSIVNVDEEQKQPDF
ATASTTILDEEPIVNSGLAAALALCKNKGLLDTQMQKISRVRAPTGALPNDNYSIEDKMT
IDDKYSRREEYRGFTQDFKEKDAYKPDVKIEYVDESGRKLTPKEAFRQLSHRFHGKGSGK
MKTERRMKKLEEEALLKKMSSSDTPLGTVALLQEKQKSQKTPYIVLSGSGKSMNANNITK
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgggttcgtcgaaaaaacacaaggaaaagggccgtgataaagataaggatgccgaagaa
cgtggtcaccgcgaacacaaaaaacaccgtcataaggaccgggagagggacaaggaacga
gacagcaaccgagagcgggagaaaaggaaacggtccagatcgaaggaaaggagtggacgg
ggttccgagagagacggtcgcagtaaaggggagaggagtactggggagcctcgcgtaaag
aaagaaaaagtggagcccggatgtgagggcacagaaattgcaccacagtctgcaagtgga
gatgcctcacttaccattgaagagacaaacaagctgagggccaagcttggtctgaagcct
ctggaaatgactgacaccactaaagagctcggcacgaaggagcagccaattgttgcagag
acgatcaacccagtgtacattaaacagcagaaggagatgcgggagaaactggcagctctg
aaggaaaagaggctcctcaataagaaactggggaaagtgaagaccttagcagaagaagac
tggctggatgacactgttgcctgggttgagaggagccggaagatggccaaagagaaagaa
ctggcagagaagagagccaagcttctgcaggagatggatgaggagtttggtgtgagcaat
ctggtggaggaggagtttggacagaccaacaaggccgcttacagctctcgggacctaaag
ggtctcactgtgcagcacaagatggagtcatttaatgaaggggagactgtcattcttaca
ctgcaagacaaaggtgtgcttgatgaagaggggggcgatgttcttgtaaatgtgagtctg
gtggacaaagaaaatgctgagaagaatgtggagttgaagaagaaaaagcctgattacaaa
gcctatgaagaggacgagagtgtggatgacatggttacgttcaagccgcgcactgtgctg
ggcaagtatgatgaggagattgatggagagaagaagaagagtttccggctgagcaaaggg
ggctgtgctgagggggaacgggaacgggagctcctggccatcagggagaccctgaggaac
caggcccagtccctggagatgcctgctctcgctattgcctcagagtactacacaccccag
gagatggtgggctttaagaagaccaagcagcgtgtcaggaagatcaggaagaaggagaag
gcattgcctgatgagctccaattagacgacacacgcaacaccgactttggctccagggct
cggggtcggggtcgcaagcagttggatgaggagggccaggaaggggtgaaggagcgtgtt
atcataccgggactagatgtaccccaacagtcagatgacatcaggatggcggacatggac
atcagtgacgatgagaacttcaccccccctgatccggctgtgctggaggaggacgaggca
gagcaggagctgcaaaagcagctggagaaacagcgaaaactcaaacagaaacagctgctc
aaaaactctggggaaaaggtggcagagcaggtccgagggcttgcaagagtggacgacagt
gacgatgaagaagacaagaacaatctgaacattgtgttcaacgccacctctgagttctgc
agaactctgggtgacatccccacctacggcctgtcgggaaaccgagaggaccaggaggac
atcatggatttcgagcaggaggcggagagagatggcgctggcggttcagactccgatggg
gatgagaatgttggctggagcatcgtcaatgtggatgaggagcagaagcagcctgatttc
gccacagcctcgaccaccatcctggatgaagaacccattgtcaactctgggctggctgct
gccttggcgctctgcaagaataagggtctcttggacactcaaatgcagaagatatcccgt
gtccgtgcacctaccggtgccctgcccaatgataactacagcattgaggacaagatgact
atagatgacaagtacagtcggagggaggaatatagaggcttcacccaggacttcaaggag
aaggacgcctacaagccagacgtcaagattgagtatgtggatgaatctggacggaagctc
actcccaaagaggctttccggcagctctcacatcggttccatgggaaggggtctggcaag
atgaagactgagaggaggatgaaaaagctggaagaggaagcgctgctgaagaagatgagc
agtagtgatacccctctaggaactgtcgctttgcttcaggagaaacagaagtcacagaaa
accccctacattgttctgagtgggagtgggaagagcatgaatgcaaacaacatcaccaaa
tag

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