Salvelinus fontinalis (brook trout): 129864128
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Entry
129864128 CDS
T11136
Symbol
pax2b
Name
(RefSeq) paired box protein Pax-2b isoform X1
KO
K15608
paired box protein 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129864128 (pax2b)
04131 Membrane trafficking [BR:
sfon04131
]
129864128 (pax2b)
03036 Chromosome and associated proteins [BR:
sfon03036
]
129864128 (pax2b)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
129864128 (pax2b)
Membrane trafficking [BR:
sfon04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
129864128 (pax2b)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
129864128 (pax2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
Motif
Other DBs
NCBI-GeneID:
129864128
NCBI-ProteinID:
XP_055792745
LinkDB
All DBs
Position
1:95318112..95383914
Genome browser
AA seq
429 aa
AA seq
DB search
MDIHCKVDPFSAMHLSHIGHGGVNQLGGVFVNGRPLPDVVRTRIVELAHQGVRPCDISRQ
LRVSHGCVSKILGSYQKDFKRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMF
AWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFHPSPDGTSLSAPGHTMVPSQASP
PVTSPSNDPVGSYSINGILGIPRSNGEKRKRDEDGSDGSGPNTDSQVSVDSLRKHLRADA
FTQQQLEALDRVFERPSYPDVFPTSDHIKPEQANEYSHSHSLSSLNPGLDGEVKPSLSSS
SNQNLGPSVSVTQSYSVGRDMANTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFTGNPY
SHPQYTTYNEAWRFSNPALLMPHPEVPDHLLLPRHMTATSYHGNQINHHHHHLHHDYNHG
FGSVHVAPV
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagtagacccgttctcagcgatgcacctctcccatatagggcac
ggcggtgtgaaccagctgggcggggtgtttgtcaacggcagacccctacctgacgtggtg
aggacaagaatcgtagaactcgcccaccaaggagtgagaccctgtgacatttcaagacaa
ctacgggtcagccacggctgtgtcagcaaaatactgggcagctatcaaaaggattttaaa
agatactacgagaccggcagtataaagccaggagttattggtgggtccaaaccaaaagtg
gcgactccaaaggttgtggataaaatagcggactacaagcgccagaatccgaccatgttc
gcgtgggaaatcagagacagactgttagctgagggcgtctgtgacaacgacacggttcca
agcgtctcgtccattaacaggataatacgaacaaaagtccagcagcctttccacccgtct
ccagatggaacatccctgtctgcaccgggccacaccatggtaccgagccaggcctctcca
cctgtaacaagcccttccaacgaccctgtggggtcctactccatcaacggcatcctgggt
attccccgatcaaacggcgagaagaggaaacgagatgaagatggttcagatgggtctggc
ccaaacactgattctcaggttagtgtggacagtttacggaagcacctgcgggccgatgct
ttcactcagcagcagctggaagctttggaccgggtctttgaacgcccgtcgtaccccgac
gtcttcccaacctcggatcacatcaaaccagaacaggcaaacgagtactcccactcccac
tccctgtcctccctgaatcctggcctggacggcgaggtcaaacccagcctgtcctccagc
agtaaccagaacctgggccccagtgtctctgtgacacagagctactctgtaggtcgagac
atggccaacacaaccctaccgggttatccccctcacgtaccccccaccggccaaggcagc
taccccacctcaacactggccggaatggttcctgggagtgagtttacaggaaacccttac
agtcatccacagtacacaacctacaacgaggcttggcggttcagcaacccagcgttacta
atgccacatccagaggttccggaccacctactgctgccacggcatatgaccgccactagt
taccatggaaaccaaatcaaccaccaccaccaccacctacaccacgactacaaccacggc
ttcggcagcgtccatgttgccccggtgtga
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