Salvelinus fontinalis (brook trout): 129864195
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Entry
129864195 CDS
T11136
Symbol
ddx52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfon03009
]
129864195 (ddx52)
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129864195 (ddx52)
Ribosome biogenesis [BR:
sfon03009
]
Eukaryotic type
90S particles
Helicases
129864195 (ddx52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
129864195
NCBI-ProteinID:
XP_055792866
LinkDB
All DBs
Position
10:complement(46016698..46137154)
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AA seq
633 aa
AA seq
DB search
MDAFDLFRKLGAGAKFDFKRFGKDAERFKVVRSQEKDVSDHYGIDFFGTGGTHGNKEQRA
AEKQEEEGEVDAVAGKRKLQDEEKTAKKKKKDTQAEVACEENEGILWTSSADRKSKGLKE
GRDRDKTSMKRLQHLHQENVNRVRTQNRINVHGCDVPDPVCTFSELQSEYNLNPRVLQNL
SAAGLTIPTPIQMQAIPLMMHGRELLACAPTGSGKTLAFSLPLLTHLKQPANLGIRALII
SPTRELASQTHRELVRLSEGVGFRVHILDKASMAARRHATSSNNKSDILISTPNRLVFLL
KQDALDLSSVEWLVVDESDKLFEDGRRGFRDQLAAVFQACSSPRVRRAFYSATCAPDVEQ
WCRLNLDNLVSVNIGHRNSAVETVEQELLFVGTENGKLLAVRDIIKKGFLPPMLVFVQSI
DRARELFHELVYEGINVDIIHADRTQQQRDNVITSFRSGDIWVLICTALLARGMDFKGVN
LVLNYDFPTSAVEYIHRIGRTGRAGRTGKAVTFFTEDDKPLLRSIANVIKQAGCPVPGYM
VGFKKIHSKVKRQLQKKPPKRSTIRTTPQFVPTKGKGGEKTGGQKKIKKKGGLGGAKKGV
DGPETKGAEGQTSSVGVQSKVQGTRKKKKGKKN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggacgctttcgacttgtttcgtaaactcggagccggagcgaaatttgatttcaagagg
tttggaaaagatgccgaacgatttaaggtggtcaggtcccaagagaaagatgtatctgac
cactatgggatcgacttcttcggaaccggaggaacccacggcaacaaggagcagagagcg
gcggagaagcaagaagaggagggagaggtagatgctgttgcagggaaaaggaaactacag
gatgaggagaagactgcaaagaagaaaaagaaagatactcaggctgaagtggcgtgtgag
gagaacgagggcatcctgtggacctcctctgcagacaggaagtctaaaggcttgaaggag
gggagggacagagacaagacatccatgaagagactccaacacctccaccaagagaatgtg
aaccgtgtccgcacgcagaatcgtatcaacgtgcacggctgtgacgtgcctgacccagtg
tgcacgttctccgagctgcagtccgagtacaacctgaacccacgcgtcctccagaacttg
tccgcagctggactcaccatacccacgcccatccagatgcaggctatacccctgatgatg
catggtcgtgagttgttggcgtgtgctccgacaggttcggggaagactctagcgttctct
ctccctctcctgacacacctgaaacagcctgctaacctcggcatcagagctctgatcatc
tctcccaccagggaactggccagccagacccacagggagttggtgcgtctgtcggagggc
gtcgggttcagagttcacatcctagacaaggcctccatggcagccaggaggcacgctacc
agctctaacaacaaatctgatattctgatcagtacccccaatagactggtgttcctcctg
aagcaggatgctctagacctcagcagtgtggaatggttggtggtggacgagagtgataag
ctgtttgaggatggtcgtagaggcttcagagaccagctagcggcggtgttccaggcgtgt
tcctccccgcgggtcagacgagcgttctacagcgctacctgtgctccagatgtggaacag
tggtgtcgcctcaacctcgacaacctggtgtctgtcaacattggacacaggaactctgcg
gtcgagacagtagaacaggagctgctgtttgttggaacagagaacgggaagttactggcc
gtgagggacataatcaagaagggtttcttaccccccatgctggtgtttgtccagtctatt
gatcgagccagagagctcttccatgagctggtctacgaaggaatcaacgtagacattata
cacgctgaccgaacacagcaacagagagacaacgtgatcactagtttccggtcgggtgat
atctgggtgttgatctgtacggccctgctcgcccgaggtatggactttaagggtgtcaac
ctggtgctgaactacgacttccctaccagcgctgtggaatacatccaccgcatcggtcgt
actggcagggctggacgcacagggaaagctgtcaccttcttcaccgaggatgacaagcct
cttctacgcagtattgccaatgtgatcaagcaggcaggttgtcctgtccctggctacatg
gttggttttaaaaagatacacagtaaggtgaaacggcagctccagaagaaaccaccgaag
aggagcactatccgtaccacccctcaatttgtaccgacgaagggaaaaggaggagagaag
actggaggacagaagaaaataaagaagaaaggaggacttggaggagcaaagaaaggagtt
gacggaccggagacgaagggagctgaaggacagacgtcgtctgtaggagtccagtctaag
gtccaggggacgaggaaaaagaagaaaggaaagaagaactga
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