Salvelinus fontinalis (brook trout): 129864201
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Entry
129864201 CDS
T11136
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129864201
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129864201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129864201
Spliceosome [BR:
sfon03041
]
Common components
Common spliceosomal components
SR proteins
129864201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129864201
NCBI-ProteinID:
XP_055792874
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Position
10:complement(46162611..46185611)
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AA seq
261 aa
AA seq
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MSGDNMSGGGSVVRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGP
PFAFVEFEDPRDADDAVHGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGRGGGGDGGGAP
RGRYGPPSRRSEYRVIVSGLPSSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDM
TYAVRKLDNTKFRSHEGETAYVRVKVDGPRSPSYGRSRSRSRSNGRSNGRSNSRSRSFSP
PRRSRPSPRYSPRHSRSRSRT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagataatatgtcgggcggcgggagcgtggttcgtggcccagcgggaaacaac
gactgtcggatctacgtgggtaacctgccgcctgatattcgcactaaagacgttgaggat
gtgttttataagtacggggcgatccgagatatcgatctgaaaaaccggaggggaggaccg
ccgttcgcttttgtggaattcgaggaccccagggatgctgatgatgcggtgcacggtcgt
gatggttatgactatgatggttaccgtctccgggtggagttcccccgtagtgggcgtggg
ggagggagagggggtggtggcggcggcaggggtggcggcggcgatggaggaggggcccca
agaggacgatacggacctccctcacggcgctcagagtacagagtcatcgtctcaggtctc
ccctctagtggtagctggcaggacctaaaggaccacatgcgcgaggcaggtgatgtatgt
tatgctgacgtgttccgggacggtaccggcgtggtggagttcgtccgtaaggaggacatg
acctacgctgtccgcaagctggacaacaccaagttccgctcccacgagggagagactgcg
tacgtccgtgtgaaggtggacggacctcgcagccccagttacggacgctcccgctctcgt
agccgtagcaacgggcgtagcaacgggcgtagcaacagccgctcgcgcagcttctcgccg
ccgcgacgcagccggccttcgccacgctactcgccacgacactcccgatcacgctcccgc
acctag
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