Salvelinus fontinalis (brook trout): 129864379
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Entry
129864379 CDS
T11136
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03020
RNA polymerase
sfon04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129864379 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
129864379 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfon03021
]
129864379 (polr3a)
Enzymes [BR:
sfon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129864379 (polr3a)
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
129864379 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF3654
Motif
Other DBs
NCBI-GeneID:
129864379
NCBI-ProteinID:
XP_055792943
LinkDB
All DBs
Position
1:complement(96314785..96404742)
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLPYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLEMPCFHVGYFKAIIGILQMICKTCSHIMLTKE
EKLQFMDVLKRPGLAYLQKRGMKKKISDKCRKRTMCLNCSTLNGPVKKCGLLKILHEKYK
TTKKVVDTVVSDFLNSFDIAIEHNKEVEGLLNRAQENLSPLVVLNLFRRIPAEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVISDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLEMLRKLVRNGPEDHPGANF
IQQRHTQMKRFLKYGNREKMAQELRFGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRSKACQIVASILVGVDEKIKIALPHPAILKPVTLWTGKQL
FGLILKPSKDCPVKANLRTKGKQYSGKGEDLCSNDSFVVIQNSELMCGTMDKGTLGSGSK
KNIFYILLRDWGQLEAANAMSRLARIAPTYLSNRGFSIGIGDVTPGQGLLKAKQDLLDGG
YAKCDEYIEALKTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKTNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
VYGGDGLDPAAMEGKDEPLEFNRVLDNIRSVHTCSEQPALSKNELVLTAESIMKRSDFKC
CRDSFLEEIKKFIKATSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPSQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIISAHLDVDDDADFGRLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYVLQSLKDNLPKVV
VQGIPEVSRAVIHIDEQTGKNKYKLLVEGDNLRSVMATHGVNGNRTTSNNTYEVEKTLGI
EAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDPTPPRRPLLFD
SAEFHIPLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagagcagtttagagagactgatgtggccaaaaaaataagccacatctgtttt
gggatgaagtcggctgaacagatgagacagcaggctcatatccaggtggtcagtaagaac
ctgtacagccaggacaccagccatactcctctaccatacggagtactggatcaccgcatg
ggcaccagtgagaaggatcgtccatgtgagacgtgtgggaagaacctggcagactgtctg
ggacactatggatatctggacctggagatgccctgttttcatgtgggctatttcaaagcc
atcattggaatcctacagatgatctgtaagacgtgttctcacatcatgttgaccaaagag
gagaaactacagtttatggatgtgttgaagaggccaggcctagcatacctccagaaacga
ggaatgaagaagaagatatccgacaaatgccgcaaaaggacaatgtgtctcaattgctcc
acgttaaatggaccagtgaagaagtgtggcttgctaaagatcctccacgagaaatacaag
acaaccaagaaagtggtggacactgtagtatcagactttctcaactcattcgatatcgca
atagaacacaacaaagaagtggagggcttgcttaacagggctcaggagaacctgagtcct
ctggtggtgttgaacctgttcaggaggattccagcggaggacattcctctgctcctgatg
aaccctgaggcaggtaagcctgcagacctcatcctcacccgtctgctggtacccccactc
tgcatccgcccctctgtcatctcagacctcaagtcaggtactaatgaggatgacctcacc
atgaagctcacagagatcatcttcctcaatgacgtcatcaagaagcaccgtatgtcaggg
gccaagacccagatgatcatggaggactgggacttcctccagctgcaatgtgctctctac
atcaacagtgagctctctggcatccccctcaacatggcccctaagaagtggaccagaggc
ttcgttcagagactcaagggcaaacaagggcgattccgtggaaacctctcggggaagaga
gtggatttctctgggagaactgtcatctctccggaccccaacctgcggattgatgaggtg
gccgtccctgtgcacgtggccaaaatcctgacctacccagagaaggtgaacaaggccaac
ttagagatgctgaggaagctggtgcgtaacggtcccgaggaccaccctggagccaacttc
atccagcaacgtcacacgcagatgaagaggtttctgaagtacgggaaccgagagaagatg
gcccaggagctgaggtttggagacgtggtggagagacacatgatcgatggagacatcgtc
ctcttcaaccgacagccctctctacacaaactcagcatcatggctcatattgccaaagtg
aagcctcacagaacgttccggttcaacgagtgtgtgtgcacgccgtacaacgctgacttt
gacggggacgagatgaaccttcaccttccccagacagaggaggccaaggctgaagccctg
gtgctgatggggaccaaagccaacctggtgacccccagaaacggagagcctctgattgct
gctattcaagactttctgacaggagcctacctgttgaccctgaaggacactttcttcgat
aggtctaaagcctgccagatagtggcctctatcctggtgggggtggatgagaagatcaag
atagctctcccacaccctgccatactcaagcccgtgactctgtggacagggaagcagctc
tttggtctgatcctgaagcccagtaaggactgtccagtcaaggccaacctgaggaccaag
gggaaacagtacagcggcaaaggagaggacctctgcagcaatgactccttcgtggtgatc
cagaacagtgagttgatgtgtggtaccatggataaaggcacgttgggctctggctccaag
aagaacatattctacatcctgctgagagactgggggcagctggaggcagccaacgccatg
tctcgcctggcccgcatcgctcctacatacctctccaatcggggtttctccattggtatt
ggtgacgtgaccccgggccagggtctgctgaaggccaaacaggacctgctggacggaggc
tatgccaagtgtgacgagtacatcgaggccctgaagacgggcaaactgcagcaacagcca
ggctgcacggctgaggagacgctggaggccctcatcctgaaggagctatctgttatcaga
gaccatgccggcagcgcctgcctcagagaactggacaagaccaacagtcctctgattatg
gctctgtgtggctccaaaggatccttcatcaacatctcccagatgattgcctgtgtgggc
cagcaggctataagcggctctcgagtgcccgacggctttgagaaccgctcgctgccacac
tttgagaaacactctaaacttcctgcggctaaaggctttgtggctgacagcttttattca
ggcctgacgcccacggagttctttttccacactatggctggtcgagagggcttggtggac
accgccgttaaaacagcagagaccggatacatgcagaggcgtctggtgaagtcgttggag
gacctgtgttcccagtatgatctgacggtacggagctccacgggtgacatcatccagttc
gtctatgggggggacggcctggacccggccgccatggaggggaaagatgaaccgttagag
ttcaacagagttctggacaacatccggtctgtccatacgtgttcagagcagccagccctt
agtaagaatgagttggtcctgacggcagagtccatcatgaagaggagtgacttcaagtgc
tgccgagacagcttcctcgaggagatcaagaagttcatcaaggctacatctgagaaaatc
aagaagaccagggacaaatacggcatcaacgacaatggcaccacagagcccagagtcctg
tatcagttggatcgcatcactcccagccagctagagaagtttctggagacctgcagggac
aagtacatgagagctcagatggagccgggctcagccgtaggggccctgtgtgcccagagc
attggggagcctggcacacagatgaccctgaaaaccttccactttgctggggtagcctcc
atgaacatcaccctgggggtcccacgcatcaaggagatcatcaacgcctccaagaacatc
agcacacctataatcagcgctcacttggatgttgacgacgatgcagactttggccgactg
gtgaaaggaaggattgaaaagacccttctgggagagatttcagagtacattgaagaggtg
tttctgccagacgactgtttcattctggtcaagctgtcactggagaggatcagacttcta
cgactagaggtaaatgcagagacggtccgctactctatctgcatgtctaagctgagagtg
aagcctggagacatagctgtacacggggaggcagtggtctgtgtatctcccagggaaaac
agcaagagctccatgtactacgtcctccagtctctaaaggataacctgcccaaggtggtg
gtacagggtatccctgaggtgtccagagctgtcattcacatcgacgagcagaccggcaag
aacaagtacaagctgctggttgagggagacaacctacgcagcgtcatggcaacccacggt
gtcaacggcaacaggaccacctcaaacaacacctatgaggttgagaagacgcttggcatc
gaggctgctaggtccaccatcatcaatgagatacagtacaccatggtgaaccacggtatg
agcatcgacaggcgacacgtcatgctcctggcagacctcatgtcctataagggtgagatc
ctaggtatcaccaggtttggcctggctaagatgaaggagagtgtgttgatgctggcgtcc
tttgagaaaactgccgaccatctctttgatgctgcgtactttggtcagaaggactctgtc
tgtggtgtatcagaatgcatcatcatgggaatccccatgaacatcggtacaggactgttc
aagctcttacacaaggctgacaaggaccccactccacccaggagacccctgctcttcgac
agcgccgagttccacatccccttggttacatag
DBGET
integrated database retrieval system
