Salvelinus fontinalis (brook trout): 129864927
Help
Entry
129864927 CDS
T11136
Symbol
lsm8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03018
RNA degradation
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129864927 (lsm8)
09123 Folding, sorting and degradation
03018 RNA degradation
129864927 (lsm8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129864927 (lsm8)
03041 Spliceosome [BR:
sfon03041
]
129864927 (lsm8)
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129864927 (lsm8)
mRNA degradation factors
5'-3' decay
Lsm complex
129864927 (lsm8)
Spliceosome [BR:
sfon03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129864927 (lsm8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129864927
NCBI-ProteinID:
XP_055793232
LinkDB
All DBs
Position
11:complement(6381309..6384970)
Genome browser
AA seq
96 aa
AA seq
DB search
MSTALESYINRTVAIVTSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEDTDSSLDLGNIRAEPLNSIVH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgccctcgagagctacatcaaccgtacagtggccatcgttacatctgacgga
cggatgatagtgggcaccctgaagggctttgaccagaccatcaacctgattctggatgag
agtcatgagcgtgtgttcagttcctctcagggcgtggagcaggtggtcctgggactatac
atcgtcagaggagacaacgtagctgttattggggagattgacgaggacacagattcttcg
ctggacctggggaacatccgcgcggaaccccttaactctatagtccactga
DBGET
integrated database retrieval system
