Salvelinus fontinalis (brook trout): 129865099
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Entry
129865099 CDS
T11136
Name
(RefSeq) AT-rich interactive domain-containing protein 2-like isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129865099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129865099
03021 Transcription machinery [BR:
sfon03021
]
129865099
03036 Chromosome and associated proteins [BR:
sfon03036
]
129865099
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
ARID
129865099
Transcription machinery [BR:
sfon03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129865099
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
129865099
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
129865099
NCBI-ProteinID:
XP_055793558
LinkDB
All DBs
Position
11:14024584..14050930
Genome browser
AA seq
1659 aa
AA seq
DB search
MANSTGKNLLDQRRKGLAFLDELRQFHRSRGSPFKKIPVVGGKELDLNALYIRVISLGGF
AKVSDKNQWSELGEDFNFPRSCSNAAFVLKQYYLRYLEKYEKVHHFGEDDDEVQPGNPKP
SLPIGAIPCSYNYQQHTVSDYLRQSYGLSTEFTPPCDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHSMQLEKDPKLITLLLAHAGVFDDSLGSFSFVFGMDWKEQTSRDFMKFWKDV
VEDSEVRDLIWDKTSLTQVTDNMSGDERWGVLFHPPRNLGIGDIEGQRVLQVGVILRNLS
FEEANVKLLAANRTCLRFLLLCAHCHFISLRQLGLDTLGNVAAELQLDPVDFRTTHLMFH
TITKCLMSRDRFLKMRAMEILGNLSKAEDNSVLICEYVDQESYREVIGLLSLPDLMLLMS
SLEVLYLLAQLGEIPCSKIASVDRSIDLLVRLVSVDLHTFGPDALTAVRLMEHQAAGQSQ
VAEVRPQLVEQLPAPLQGAPIPAARVPVQSTPPPPGIVELDGEKFTVQWLNAHFEVSGES
SVSRSEMYSEYLTTCSKMGRAGILASQGFLKCLRTIFPNHTVKRLEDTKPNAQAHIHVVG
VKRRAIPLPIQLYYQQQASPTPGPKHDVSVDPQASPSVPSLTANPAAPQVASTMQDGVPL
PQSAQTVPRLPLHPQASPHQHPHSDQQAKSGDILKTAMVQSSIPTSGQVVQNHSPNMAQQ
LHHQQVMAPTGTPVTLFQQVQQGHIFTARVQGVPIAQRPPLPHTPSSSVPQALSQGPQQE
TAVFSAPPHYAAVSAACSSLQNFQVGGGQVFTIAGVSNAQGSRVTFQNIAPKPAPSQASG
PPTSTHNQKQQSSVVIVSPNPQQNQAYAPAIHQIVLANPSTMSGGQAIQLAGQPPTPSNP
PPCPPIIAPLPQGLPSPSNTQIPMQGSASVSQMLSVKRQPQQLNPQQQFHPQQQFQIQAQ
PLPQQQPSPQPTSTESSLIKQLLLPKRPSTPGGKLILPAPQVPPPSSTQRSPSPQVLYQV
ASKGQPQPQQLNVQLVPSQLQSPGGPLQTVQLISTSSPATIIQGQAPGGQVTFTVVPNTG
FTTSASAAAAQISQGAAAPGLPAVQTGNTLHGPPPPFRGDKIICQKEEEAKDATGLHIHE
RKIEVMENSSLADGAGTKTSNGDLAGADAPGAKLLNGRKCMDSSLPPYHSGNSQGACVNG
PASESCPTNGKQPSGPANPQEGHVDPKKALVNGVCDFERGDASTGAHLSKNIPNHIASKH
LGNGEVGPPQKLHGAPQEPSVPQQDTAKAEQAERLANGPQATGPFPNGPMGTGPNYTLPA
FRQQLFPTVTVNSQGSTGPGTLPANGLSGESRALKRPAEEDKGASGIPCKVGVRIITISD
PNKAGCSATMVAVPAGADPSTVAKVAMGNATQQRNCSTIQATSSTLPPTVAQPVQAGSSS
PNTPLSGPQAMVAPPEQTRKAGQNFKCLWQSCKRWFETPSRVFYHAATQHGGKELYPGQC
LWEGCEPFPRQRLSFITHLQDKHCSRDALLAALKLEQEPTQTQDSNQKTSKPQPVASSTP
APRAQKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPMTKHIRLTAALTLKNIAKYSDC
GRKLVKRHESHLSVLALSNMEVSTTLAKCLYELTRSLQA
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacggggaaaaatttactagatcagcgaaggaaaggactggctttcctg
gacgagctgcggcaatttcaccgaagcagaggatcgccgttcaagaagattcctgtcgtg
ggtgggaaagagctggatcttaatgctctctatatcagagtcatttcgttaggtggattt
gctaaggtttctgacaaaaatcagtggtctgagctgggtgaagattttaatttcccaagg
agttgttcaaacgcagcatttgttttaaaacagtactaccttcgatatttagaaaagtat
gaaaaagtccatcacttcggcgaagatgatgacgaggtgcagcctgggaacccgaaacca
tctcttccaattggtgcaatcccctgctcctacaactaccagcaacacactgtatcagac
tatctccgccaaagctatggactgtccacggagttcacgcccccatgcgactataacaaa
ctggtgctctctctcctgtcgggcttgcccaatgaagtggacttcgcaatcaatgtttgc
actctcctctccaacgagagcaagcattccatgcagctggagaaagaccccaaactcatc
acgctgctgctggcacatgcaggtgtcttcgatgactcactaggcagcttctcctttgta
tttgggatggactggaaggagcaaacctcccgggacttcatgaagttctggaaggatgtg
gtagaggattctgaagtcagggacctcatctgggacaagaccagcctgacacaagtgaca
gacaatatgtcgggggacgagcgctggggtgtcctcttccatcctccacgcaacctaggc
atcggcgacatcgagggtcagcgggtcctgcaggtgggggtcatcctccgcaacctctcc
ttcgaggaggccaacgtcaaactgcttgctgctaaccgcacctgtctgcggttcctctta
ctgtgcgcccactgccacttcatctccctacggcagctggggttggatacactcggcaac
gtggccgcagagcttcagttagatcctgttgactttcgaacaacccacctaatgtttcac
accatcaccaaatgcttgatgtcaagggacaggttcctgaagatgagggccatggagatc
ctgggtaatctgagcaaggcggaggacaacagcgtgctgatctgtgagtacgtggaccag
gagtcgtaccgggaggtgatcggcctgctgtcgctgcctgacctcatgctcctcatgtcc
tccctggaggtcctctacctgctggcccagctgggggagatcccctgcagcaagatcgcc
tccgtagacaggagcatagatctgctggtgcggctggtgtcagtggacctgcacactttt
ggtccggatgctctgacggctgtgaggctgatggagcaccaggctgctgggcagagccag
gtggccgaggtgcggccgcagcttgtagaacagctgcctgctccgctgcagggcgcaccc
atcccagcagcaagagtccctgtccagtccactcctccccctcctggtattgttgagcta
gatggggagaagtttacagtgcagtggctgaacgcccacttcgaggtgagcggcgagagt
tcagtgtcgcgctcagagatgtactcggagtacctcaccacctgcagcaagatgggacgc
gctggcatcttggcctcccaaggcttcctcaaatgtctacggaccatcttcccaaaccac
acagtgaagcggctggaggacaccaagcccaatgcgcaggcacacatacatgtggtgggg
gtcaaacggagggccatcccactgcccatccagctgtactaccagcagcaggctagcccc
acaccagggcccaaacacgacgtctctgtcgacccacaggcatccccgtcagtccccagc
cttactgctaacccggcagcgccacaggtggcctccaccatgcaggatggtgtacccctc
ccccaatcggctcagactgttcctcggctcccccttcacccccaggcctcaccacatcag
cacccccactcagatcagcaggccaagtcaggggatatcctcaagacggccatggtccag
agctccatccccacctctggccaggtggtccagaaccacagccccaacatggcccaacag
ctccaccatcaacaggtcatggcgcctaccgggacccccgtcacactgttccaacaggta
cagcagggccacatcttcacggcgcgggttcagggggtgcccatcgcccagcggccgccc
ctgccgcacactccctcctcctcagtaccccaggccctctcccagggcccccagcaggag
acggctgtgttctctgcccccccgcactacgctgctgtgtctgccgcctgctcctcgctg
caaaacttccaggtgggcgggggccaggtgttcaccatcgccggcgtgtccaacgcccag
ggttcccgcgtcactttccagaacatcgcccccaagcctgcaccctcgcaggccagcgga
ccgcccacatccactcataaccagaagcagcagtccagcgtggtcattgtcagccccaac
ccccagcagaaccaggcctatgccccggctatccatcagatcgttctggccaacccctcc
accatgtctggtggccaggccatccaactggcaggacagcctcccactccttccaacccc
ccaccctgccctccaattatcgctcctctgccccagggcttgccctctccttccaacacc
cagatcccaatgcagggctctgcttctgtcagtcagatgctgtcggtcaaacggcaacca
cagcaattgaacccccagcagcagtttcacccccagcagcagtttcagattcaggcccag
cccctgcctcagcagcagccgtccccccagcctacctccacagagtccagcctgatcaaa
cagttactgcttccaaagcggccctccacgccgggcggcaaactcatcctgcccgcgccc
caggtgcctccccctagtagcacgcagcgttcccccagcccacaggtgctctaccaggta
gcctcaaagggccagcctcagccccagcagctcaatgtacagctggtccccagccagctt
cagtccccaggggggcctctccagacggtgcagctcatctccaccagcagccccgccacc
atcatccagggtcaggctcctggtggccaggtcaccttcactgtggtacccaatacaggc
ttcaccacttcagcctctgcagccgccgcccagatcagccaaggagccgctgcaccaggc
ctgccagcggtccagacaggcaacaccctccacgggccaccgccgcccttcaggggagac
aagataatctgccagaaggaggaggaggccaaggacgccacgggtctgcacatccacgaa
cgcaagatcgaggtgatggagaactcctctctagccgatggggctggcaccaaaaccagc
aacggagacctggcaggagctgatgctccaggggccaagctgcttaatgggaggaagtgc
atggactccagtctacctccataccactcagggaacagccagggggcctgcgtcaatgga
ccggccagcgagagctgccccaccaacgggaaacagccctctggcccggctaacccacag
gagggacacgtcgaccccaaaaaggctcttgtcaatggggtctgtgactttgagagaggg
gacgcctccaccggtgcccacttaagcaaaaacattccaaatcacatcgcttccaaacac
ttggggaacggggaggtgggtcctcctcagaaactgcatggggctccccaggagccctct
gtcccccagcaggatactgccaaagctgagcaggcagagcgccttgccaatgggcctcag
gcaacaggccccttccctaacggacctatggggacggggcctaactacactttgcctgct
ttcaggcagcagctgtttcccactgtcactgtaaactcccagggctccacggggccaggg
accctgccggccaatggtttgagtggcgagagccgtgcactcaagaggccggcagaggag
gacaagggggcgtctgggattccctgtaaggtgggagtgaggatcatcaccatcagcgac
cccaacaaggcgggctgcagtgccaccatggtggccgttcctgctggagccgacccaagc
acagtagccaaagtagcaatggggaatgccacgcagcagaggaactgctcgaccatacag
gcaaccagctctacgcttccgccaacagtggctcagcctgtgcaggctggcagctccagc
cccaacacccccctttctgggccacaagccatggtggcacccccagaacagaccaggaaa
gcgggacagaacttcaagtgtctgtggcagtcctgtaaacggtggtttgagacgccgtct
agggtgttctaccatgcagccacgcagcatggtggcaaggagctgtacccaggccagtgc
ctctgggagggatgtgaacctttcccccgacagagactgtccttcataacccatttacag
gataagcattgttctcgagatgccctattggccgcactaaaactggagcaggaaccgaca
cagacgcaggactccaatcagaaaacttccaagcctcagccagtggcaagcagcactcca
gcaccgcgagcacagaaagctattgtcaatcatccgagcgcagcccttatggcactacgc
agaggctctcggaacctggtgttcagggacttcactgatgaaaaagagggaccaatgacc
aaacacatacgactaactgctgccttaacgctaaagaacatcgccaagtattcagactgc
ggtcgaaagttggtaaagaggcatgagagccacctctctgtgctggcactcagtaacatg
gaggtctccacaacgctcgccaaatgcctttatgaactgactcgctctctccaagcttga
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integrated database retrieval system
