Salvelinus fontinalis (brook trout): 129865324
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Entry
129865324 CDS
T11136
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129865324
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129865324
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
OVT1
Motif
Other DBs
NCBI-GeneID:
129865324
NCBI-ProteinID:
XP_055793984
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All DBs
Position
11:23277221..23304677
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AA seq
1781 aa
AA seq
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MLILHIASLLTLGWRSFAQLPEFGDVCTEGSCYPATGDLLIGRAHKLTASSTCGIEKPER
FCIVGHLEEEKKCFVCDSREKYDERMNHTTSHSIENLVTTFAPNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGKKWQVYRYYSYNCESAFPGISVGPM
VKVDDIICDSRYSDIEPSAEGEVIFRVLDPAFEIEDPYSPRIQNMLKITNLRVQFTKLHT
LGDNLLDSRDEVTEKYYYALFDMVVRGNCFCYGHASKCAPVDGIHVGTEGMVHGHCMCNH
NTEGLNCEHCKDFYNDLPWRPAEGRNTNACKMCECNYHSRSCHFDMAVYLSTGNVSGGVC
DECQHKTIGRQCEQCRPFYYQHPERHLRDPNICEPCSCHPTGSLQGGVCDGRTDVSAGLI
AGQCRCKTSVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLPGGSPCDMDTGNCFCKR
LVTARNCDRCLPQHWGLSNDMDGCRPCDCDQGGAVNNDCSPISGQCQCREHMYGRRCDQV
ESGFYFIALDHYTYEAEDAKHGPGVTVVPRPSPPNRSPTWTGAGFVKVPEGAHLEFHINN
LPDSMDYDMLIRYEPQLPEQWEQVEIRVIRPYSMRVGQPASPCENMLQGGDQQLVSLPPG
SRHVLLPRPACLEKGQNYTVRLSLPLYSSLSDVQSPYTLIDSLVLIPRVRELLLFEGSQG
EGAWDTFQRYRCLESSQSVIKSPMTDICNDYIFSVSALLHQGAMACQCDSQGSLSAVCDP
SGGQCQCRPNVAGRNCDRCAPATFLFSPLGCRRCECSPTGSVNAFCHEATGQCECVPGAS
GRQCAHCLPGYWGFPQCQPCQCNGNSDYCHPQTGECQGCHAFTTGHMCERCLDGYHGDPV
LGLGGHCRPCMCPDGPGSGRQYADSCYQTANNYQLVCVCSPGYRGARCDECAPGHYGNPQ
VPSGRCLPCQCNDNIDQLDPGSCDARTGVCLKCLDHTEGYGCQRCKLGYYGNAASQSCRK
CMCYSVGTTSEACPSPGECHCDLQTGQCPCRTNVIGQNCDSCAPDTFNIGSGQGCQTCDC
DPTHSFGTSCNELSGQCSCRSGFGGRKCNECRDRFWGDPEVKCQACDCDLRGIASEQCHR
SSGQCVCVEGVSGPRCNQCARGYHGTFPACERCHQCFAEWDREVGELSNQTQRLKDHVTE
LQTSGVTAPYKDTVSSLEISANAISAIVENNPAIQKMEDVQQMMQQATELVAGLNERLNI
SEDSLSRLVVNANDNKASLDALRKQAQELERTVTDIRDHIKTVKNSNIEGAMDTITKAHL
ESKRAEIRANQTTSYPDNTLEQSATLRRQAEARLSQNQAEFDLRQQKHTERLERLATELN
TLDLSELSKQTCGAAGGEEGCAASPCGGVGCVSEDGTLRCGGEGCDGLVTQTQSTLKTAK
DFDQEILSTVQEVDKLSRMVWEVNVRANEVKLSAQEVLLKSNQSRDRVEQSNEQLRGLIK
EIRDLLTNGRAKVEVIEAVSNEVLALEMPTSSEQLEALTKEIRDRVGTLTSVEDILSQSA
NDIHTAEGLLEQARTASQEVSEMKETAALVKEALETTERAQNAAIDAVKQTHNNTRGTLD
LITSVESEMAESELRLSNAILRLLQLERDVTLLRESSLGTSHRTQHTERLSETARQDAEQ
ALQEFDLEVKGKYSVVEGLVVTKAEGVSDARKRAELLQQEAKELLTQTSVKLQRLRELER
SYAANQRTLEAKTVQLAGLEKTARQLLNDISQKVMVYSTCS
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgttgatattgcacatcgcatcacttttgaccctcgggtggcgctcctttgcccagctg
ccggagtttggggatgtgtgcactgaggggagctgctaccccgccaccggggaccttctg
atcggccgtgcgcacaagctcaccgcctcctccacctgcggcattgagaagcctgagcgc
ttttgcatcgttggtcacttggaggaggagaagaagtgttttgtgtgtgactccagggag
aagtatgatgagaggatgaaccacaccaccagccacagcatcgaaaacttggtcaccacc
tttgcccccaaccgcctcaagacctggtggcagtctgagaatggtgtggagaatgtgacc
attcaactgaacctggaagctgagttccacttcacacatctcatcatgacctttaagacg
ttccgtccggctaccatggtgatcgagcgttccatggattttgggaagaagtggcaggtg
taccgttactatagctataactgtgagtccgccttccctgggatatccgtgggacccatg
gtcaaagtggacgacatcatctgtgactctcgctactctgacatagagccgtccgcagag
ggagaggtgatattcagggtgctggacccagcgtttgagattgaagacccttacagtccc
aggatacagaacatgctgaagatcactaacctgcgtgtccagttcactaagctccacaca
ctgggtgacaacctgctggactccagagacgaggtcacggagaaatactactacgccctc
ttcgacatggtcgtccgcggcaactgcttctgctatggacatgcctccaaatgcgcccct
gtcgatgggatacacgtaggcacagagggcatggtccatggtcactgtatgtgtaaccac
aacacagagggtctgaactgtgagcactgtaaggacttctacaacgacctgccctggagg
cctgcagagggacgcaacaccaatgcctgcaagatgtgcgagtgtaactaccactccagg
tcatgtcactttgacatggctgtgtatctgtctacggggaacgtgagtggaggagtatgt
gatgagtgtcaacataagaccatagggcgtcagtgtgagcagtgcagacccttctactac
cagcaccccgaaagacacctgagagaccccaacatctgtgaaccgtgtagctgtcacccg
acgggctccctgcagggtggtgtgtgtgacggcaggacagacgtgtctgctggtctgata
gcaggacagtgtcgctgtaagaccagtgtggagggagagcgctgcgaccactgtagacag
ggacactacggcctgggacagggaccaaacggctgcctgcagtgtacctgtaatcccctg
ggcacactgcctggaggaagcccatgtgacatggacacaggaaactgcttctgcaaacgc
cttgtcaccgccaggaactgtgaccggtgtctgccgcaacactggggcctgagtaatgac
atggacggctgcagaccatgtgactgcgaccagggcggagccgtcaacaatgattgttct
ccgatatcaggccagtgtcagtgtcgagaacacatgtatgggaggcgttgtgaccaggtg
gagtcaggattctacttcatcgccctggaccactacacctatgaggctgaggacgccaag
cacggccctggtgtgacggtggttcccaggccctctcctccgaaccgtagtcctacctgg
acaggggcggggtttgtcaaggtacctgagggagcccacttggagttccacatcaacaac
ctacctgactccatggactacgacatgctgatccgctatgaaccacagttgccggagcag
tgggagcaggtggagatcagagtgatacgtccgtactcaatgagagtgggacagccagcc
agtccatgtgaaaacatgctacaaggaggagatcagcagttagtgtctcttcctccagga
tccagacatgtgctgctcccgaggcctgcgtgtctggagaaggggcagaactacacggtg
cgtctcagtctgcctctctactcctctctcagtgacgtccaaagcccctacacgctcatc
gactccttggtgttgattccgcgggtgcgtgagctgctgttgtttgagggttctcagggc
gagggggcgtgggatacgttccagaggtaccgctgtctggagagcagccagagcgtcatc
aagagccccatgacggacatctgcaacgactacatcttcagtgtgtctgccctgctacac
cagggggctatggcgtgccagtgtgactcccagggctctctcagtgcagtgtgcgacccc
agcggcgggcagtgccagtgtcggcccaacgtggcaggcaggaactgtgaccgctgtgcc
cccgccaccttcctgttcagccccttaggatgcagacgctgtgagtgtagtcctacgggc
tctgtgaacgctttctgccacgaggccacaggtcagtgtgagtgtgttccaggggcgtcg
gggcgccagtgtgcccactgcctgccaggctactggggcttccctcaatgccagccatgt
cagtgcaatggcaacagcgactactgccaccctcagactggggagtgccagggctgccac
gccttcaccaccgggcacatgtgtgaaaggtgtctggatggttaccatggcgacccagtg
ttgggtttggggggtcactgccgcccctgcatgtgtcccgacgggccggggagcgggcgc
cagtacgcagacagctgctaccagaccgccaacaactaccagctggtctgtgtctgcagc
cctggatacagaggagccaggtgtgacgagtgtgccccaggtcactatggtaacccccag
gtgcccagcggccgctgtctgccctgccagtgtaacgacaacatcgaccagctggacccg
gggtcctgcgacgctcgcacaggcgtctgcctcaaatgcctggaccataccgagggctat
ggctgccagcgctgcaagctgggttactacggcaatgccgccagccagagctgcaggaag
tgtatgtgttattcagtgggtacaacgtcggaggcgtgtccgtccccgggggagtgtcac
tgtgacctgcagactggccagtgtccctgccggactaacgtgattggccagaactgcgac
agctgtgcccctgatacgttcaacattggaagcggacagggctgccagacctgtgactgt
gacccaacccactcttttgggacgtcgtgcaacgagctgtcagggcagtgctcgtgcagg
tcaggtttcgggggaagaaaatgcaacgagtgccgagataggttctggggagaccctgag
gtcaaatgtcaagcatgtgactgtgacctgcgtggcatcgccagcgagcagtgccaccgt
tcgtccggccagtgtgtgtgtgtggagggtgtgtctggaccccggtgtaaccagtgtgcc
agagggtaccatgggacgttccccgcctgcgaacgatgccaccagtgctttgccgagtgg
gaccgcgaggtaggggaactgtccaatcagactcagcgtttgaaggatcatgtgacagag
ctccagaccagtggggtgacggcgccgtacaaagacaccgttagcagtctggagattagt
gctaatgctatcagtgcgatagtagagaacaaccctgctatacagaagatggaagatgta
caacagatgatgcagcaggccactgagctggtggcaggcctgaacgagaggctgaacatc
tcagaggattccctgtcccgtctcgttgtcaatgccaacgacaacaaggccagtctggac
gcactgagaaagcaggcccaagagctagaaagaacagtcacagacattcgagaccacata
aagactgtgaagaactctaacatagagggagcgatggacactatcaccaaggcccacttg
gagtctaagagggcggagatccgtgccaatcagaccaccagttaccctgacaacactttg
gaacagtcggctacactacggcgccaagcggaggccagactgagccagaaccaggcggag
tttgacctgagacaacagaaacacacagagagactggagaggctcgccacagagctcaac
actcttgacctatcagagctcagcaagcagacatgtggagcggctgggggggaggagggg
tgtgctgcgtccccctgtggaggggtggggtgtgtgtcggaggacggcacccttcgctgt
ggtggggaggggtgtgacggtttggtcacacagacacaaagcactctgaaaacagccaag
gacttcgaccaggaaatcctctccaccgtgcaggaagtggacaagctctccaggatggtg
tgggaggtgaatgtgcgtgccaacgaggtcaagctgagtgctcaagaggtgctgctgaag
tccaaccagagccgagatagagtggaacagagcaacgagcagctccgcggcctcatcaag
gagatacgagacctactcactaacggccgtgccaaagtggaggttattgaagcggtgtca
aatgaggtgttggccctggagatgcctacatcgtccgagcagctggaggccctgaccaag
gagatcagagacagggtgggaaccctcaccagcgtggaggacatcctcagtcagagtgcc
aacgacatacacactgcagaggggctgctggagcaggcccgcaccgccagtcaggaggtg
tctgagatgaaggagacagctgccctggtgaaggaagctctggaaacgactgagcgtgct
cagaatgctgccatcgatgccgtcaaacagacccacaacaacaccaggggaacacttgac
ctcatcacatctgtggagtcggagatggcggagtcggagctgcgtctgagtaacgccata
ctgcgtctgctgcagctggagagagacgtgactctgctgagagagagcagccttggcacc
agccaccgcacacagcacactgagagactgtctgagaccgccaggcaggacgcggagcag
gccctgcaggagtttgacttggaggtgaagggtaaatacagtgttgtggagggcttggtg
gtgacgaaggcagagggcgtgtctgacgccaggaagagggcggagctactgcagcaggag
gccaaggagctgctcacccagaccagtgttaaactacagagactcagagagttggagagg
tcgtatgcggccaaccagcgtactctggaggccaagacagttcagctggccggcctggag
aaaacagcacgccagctgctcaatgacatcagccagaaagtaatggtctacagcacctgt
tcttag
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