Salvelinus fontinalis (brook trout): 129865848
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Entry
129865848 CDS
T11136
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129865848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129865848
Spliceosome [BR:
sfon03041
]
Complex A
Other components
Complex A specific factors
129865848
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
129865848
NCBI-ProteinID:
XP_055794863
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All DBs
Position
11:complement(47002336..47016701)
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AA seq
682 aa
AA seq
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MATGANATPLGKLHPSIGAKRGFDAGPGAGLMPPPGPPVAFPSLPTFQPPIPNVSFPQAH
PVFTAVAAFPTPPQPPQGAGMQSQSDFGQKKARKRSRWNSETPDQKTVIPGMPTVIPPGL
TRDQEKAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKK
IEEERHSLITDMVALNPEFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTL
KNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRT
ILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTEPRSVTNTTLCTKCGG
AGHISSDCKFTSSFAAPRAGEPPQSAQDKARMDKEYLSLMAELGEAPVPSSGGGHSINQN
SGHNRGSNNQPPPSRPPWMNSGQSENRNFHSMHGGHGGHGNQHGGHGNHGGHGGHGGHHN
FPPPMSNMGGHPMPPNNGMPPPWMQPPPPPMGQGHGHHMGLLPPPMMPPPPPPPNNQPPP
PPSGPLPPWQQQAPPPPPTSSMATSAPLPWQQNTTTTSSPGTGNLPPWQQPQQSAASAAQ
PPPPMGNPSMVPPPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPPPPPPPMDPSNFVTMMG
MGVPGMPPFGMPPAPPPPPPQN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggctacgggagcgaatgcaacccctctagggaagctgcacccgagtatcggcgctaaa
cgaggctttgatgctgggcctggtgcggggttaatgcctccacccgggcctcctgtggcc
tttccttcgctaccgacttttcagccaccaattccaaacgtgtctttcccgcaagctcac
ccggtgtttactgcggtggctgcttttcccaccccgccacaaccaccccaaggtgccgga
atgcagtctcagtcagacttcggtcagaaaaaagccaggaaaaggagccgctggaatagt
gaaacacccgaccagaagaccgtcattcctggtatgcccaccgtcatcccgcctggactg
actcgggatcaggagaaggcctatatagtccaactgcagattgaagacctgactcgtaaa
ctgcgtacaggagacctgggaatccctgttaaccctgaggacagatccccgtctccagag
cccatctataacagcgagggcaagcggctgaacaccagggagtaccgcacacgcaagaag
atcgaggaggagcgtcattccctcatcaccgatatggtggcactcaaccctgagttcaag
ccccccgctgactacaagcccccagccaccagagtcaacgacaaggtgatgattccacag
gacgagtacccagagatcaactttgttggcctgctgattgggccacgtggcaacaccctg
aagaacatagagaaggagtgctgtgccaagatcatgatccgtggtaagggctcggtaaag
gagggcaaggtgggccgtaaggatggccaaatgctgccaggggaggacgaaccgctgcac
gccctggtcaccgccaacaccatggagaacgtcaagaaggctgtggaacagatccgcaca
atcctcaagcagggcatcgagacccctgaggaccagaacgacttgaggaagatgcagctg
agagagctggccagactcaacggaaccctgagagaggacgacaacaggatcctacgtcca
tggcagagcactgaaccccgcagcgtcaccaacacgaccctttgtactaagtgtggcggt
gcaggccacatctcctcagactgcaagttcaccagctcctttgctgcgcccagggccggt
gagcccccccagtctgcccaggacaaggcccgtatggacaaggaatacctgtccctcatg
gcggagctgggcgaggcccctgtaccctcttctggtgggggacactccatcaaccagaac
agcggccacaacagaggcagcaacaaccagccaccaccgagccgtcctccctggatgaac
tccggccagtctgagaacaggaacttccacagcatgcacggaggccacggtggtcatggc
aaccaacacggtggtcatggcaaccacgggggtcatggaggtcacggaggccaccacaac
ttcccaccccccatgtccaacatgggagggcaccctatgccccccaacaatggcatgcca
cccccgtggatgcagcccccaccgccccccatgggccagggacatggacaccatatgggt
ctgttgcctccacccatgatgccaccaccacctccacccccgaacaaccagcctccccct
ccaccctcgggtcccctgcctccatggcaacagcaggcccctccaccccctcccaccagc
agcatggccactagtgcaccactgccatggcaacagaataccaccacaacgtccagtcct
ggcactggcaacctgcccccctggcagcagccccaacagtccgctgcctcggctgcccag
ccccctccccccatgggcaacccctccatggtcccacctccgcccggagtccagccccct
ctgccccccggcgccccacctccccctcccccaccaccccccggctcagccggcatgatg
tatgcccctccacctccccctccgcccatggatccctccaactttgtcaccatgatgggg
atgggggtgccaggcatgccccccttcggtatgccccctgcgccgccacctccacccccc
caaaattaa
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