Salvelinus fontinalis (brook trout): 129866859
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Entry
129866859 CDS
T11136
Name
(RefSeq) transcription factor RFX4 isoform X1
KO
K09174
regulatory factor X 4
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129866859
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Other basic domains
RF-X
129866859
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
Pox_D5
Motif
Other DBs
NCBI-GeneID:
129866859
NCBI-ProteinID:
XP_055795819
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All DBs
Position
12:14942812..14972051
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AA seq
736 aa
AA seq
DB search
MHCGLLEEPDMDSTESWIERCLNENESKRYSSHTSLGNTSNDENEEKENNRASKPHSTPA
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKHDTQPVNAASFGKIIRQQFPQLTTRRLG
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPD
FPNVKDLNLPASLSEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
LPENLRNIKFELSRRFSQVLKRQTSLNHLCQASRTVIHSADITFQMMEDWRNVDLNSITK
QTLYTMEDTREEQRRLIIHLYQEFDRLLEEQSPIEAYIEWLDSMVDRCVVKVAGKRPGCL
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
MRSMKAEGNTAEQEEEMMLTETTPTSTSPGPFSPAKSVTSVGVPAASSPAAAQSPEYTGA
TATTGAVQSYTWSLTYTVTTSGGTPSEGGQQQPCMRSGAPVPPPSSAHRLPVYAHRDEHG
FTGSYNYGSYSNQHPHSIQSQYPSLAHEPGIPAPLHYPAYHRTSAQYPLNSQMSRMEPCL
MGGTPRLHPTPVTPRWADVSPANSCYTSPPIHSSRYAASGDMYSPLAPRRNSEYEHSQHF
PGFAYINGEATTGWAK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcattgtgggctgctggaggagcctgatatggattccacagagagctggattgaaaga
tgtctcaacgagaacgagagcaagcggtattccagtcacacgtccctggggaatacgtcc
aatgacgaaaatgaggagaaagaaaacaacagggcatctaaaccacattcaacaccagct
accctacaatggctggaggagaactatgagattgcagaaggggtttgtatcccccgcagt
gctctctacatgcactacctggacttctgtgagaagcacgacacacagcctgtcaacgcc
gccagctttgggaagattattagacaacagtttccacaactaaccacaagaagactgggg
actaggggacagtcaaagtaccactactatggcatcgctgtgaaggagagttcccagtac
tacgatgtgatgtactccaagaagggggcggcgtgggtgaatgagacgggcaagaaggag
gtcaccaagcaaacagtggcgtattcaccacgctccaaactggggacgctcctgccagac
tttccaaatgtcaaagacctaaatctgcccgccagtctgtcagaagagaaggtgtcaacg
ttcatcatgatgtacagaactcactgccagaggatactggatacagtaatacgcgcaaac
tttgacgaggtccagagcttcctgctgcacttttggcagggcatgcccccgcacatgctc
cctgtcctgggctcctccactgtggtcaacatcgtgggcgtctgtgactccattctttac
aaggccatctctggggttctcatgcccacagtccttcaagcactgcctgatagtttgacc
caggtgatccggaagtttgccaaacagctggatgagtggcttaaagtagcacttcacgac
ctgcctgaaaacctgaggaatatcaagttcgaattatctagaagattttctcaggttctc
aagcggcagacatctttgaaccatctatgtcaggcgtcgcggacggtgatccacagtgca
gacatcacctttcagatgatggaggactggaggaacgtggacctgaacagcatcaccaag
cagacactttacaccatggaggacacacgggaggagcaacggcggctcatcatccacttg
taccaggagtttgaccgtctgttggaggagcagtctcctatagaggcatatatagagtgg
ctggactccatggtggaccgctgtgttgtcaaggtggcagggaagaggcctgggtgcctg
aagaaggtggcccagcagttcctgctcatgtggtcgtgcttcgggacacgagtcatccgg
gatatgaccctccacagtgcgcctagcttcggctcgttccacctgatccacctgatgttt
gatgactatgtgctgtacctgctggagtccctgcactgccaggagagggccaatgagctc
atgaggtccatgaaggcagagggcaacacagctgagcaagaggaagagatgatgctgacg
gagaccacgcccacatccacgtccccagggcccttctccccggccaagtctgtcacctca
gtgggggtcccagccgccagctcccccgctgctgcccagtccccagagtacacaggggcc
acagccaccacaggagctgttcagtcatatacctggtcccttacgtacacagtgacaacg
tcaggcggcaccccttctgagggcggacagcagcagccttgcatgcgcagtggtgcccca
gtgccccctccctcctccgcccatcgactgccagtctacgcacacagggatgagcacggg
ttcactgggagctataactacggaagctactccaaccagcacccccactccatccagagc
cagtaccccagtctggcccatgaaccgggcattcctgcccccctccattatcccgcctac
caccgcacttctgcacagtacccactcaacagccagatgtcacggatggagccctgcttg
atgggaggtactcctcggctgcaccctacgcctgtgaccccccggtgggctgatgtctca
ccggccaacagctgttacaccagtccccctatacactcctcccgctacgccgcctctgga
gatatgtactcccccctggcccctcgcaggaactctgagtatgaacactctcaacacttt
cccggtttcgcctacatcaacggagaggccactacaggctgggccaagtag
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