KEGG   Salvelinus fontinalis (brook trout): 129866896
Entry
129866896         CDS       T11136                                 
Name
(RefSeq) protein NEDD1-like
  KO
K16547  protein NEDD1
Organism
sfon  Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sfon03036]
    129866896
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sfon04812]
    129866896
Chromosome and associated proteins [BR:sfon03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     129866896
   Microtubules and associated factors
    gamma-tubulin ring complex
     129866896
Cytoskeleton proteins [BR:sfon04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     129866896
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40 Beta-prop_WDR36-Utp21_1st WD40_WDHD1_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st EIF3I WD40_Gbeta Beta-prop_RIG_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_Aladin WD40_RFWD3 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_VPS8 NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 PEP5_VPS11_N eIF2A Beta-prop_IFT122_1st Beta-prop_SPT8 PROPPIN Frtz KNTC1_N VPS8_N SdiA-regulated Cytochrom_D1
Other DBs
NCBI-GeneID: 129866896
NCBI-ProteinID: XP_055795889
LinkDB
Position
12:complement(16801523..16817919)
AA seq 698 aa
MEEVTHLVSSGDCVKIWDSASMTVLEQFNPHSNTHPVAQVCWSSNNQYIVSASSIGDKLV
VSSLKSSPIPVLELAEGKKQTRVSLNSTSQYLVSGGLDNSVNIWDLKAKRLHRTLKDHKE
EVTCVSFNGSDSYIASGSTSGDIILHSITTNLSSNAFGHGTNQPIHDLKYSVVKRSLLGS
VSDSGSVVLWDANTQKELHVFDGAHKAPASGLAFSPANDLLFVTVGLDKKIICYDTSSKI
ILRNMCVESPLTAIDFTPDGAGLVVGSTQGRLYLYDLRNLSSPTKTAAAHKTSITSLRFQ
SSQSRHLKSSKIASSKSSSAQTSKRISARLGSTYLPVTTPSSTSNPPSSLPAPHAVERGD
GQAQGTGTHKEAEGQLGVDCLPSLDKFSSVGRNSLDIFSPVKDDYKAHRMSGDAPGGIKG
NAISLDMFSREGQQSMEKFSKVGRNSLDIFSPVREDYKTHGMTADESNGKKANNLDFLPT
YSGGPPQHKTPLGTLGGGCCYSPLPVFQTPSPIKEELAMPPAPAQTDTQDSKRYEKDSGS
SLEGEATTTPTSSAQTSHSQPAPPFFTPEPGLRTNDVQAQLSYNTPLNGALPIIVPVSLA
VASSLSERIVEAVGAEDGGAPLTSLQIQFIRNMIHETLEDFRDACHRDIVNLQVEMVKQF
YIQLNEIHGLIEKYSVNDSLVEEIEKLREENKRLRDNY
NT seq 2097 nt   +upstreamnt  +downstreamnt
atggaggaggtgacgcatctggtgtcgtccggcgactgtgttaagatctgggactcagcc
tccatgacagttttggaacagttcaacccgcacagtaatacacaccctgtggcccaagtg
tgctggagcagcaacaatcagtatattgtaagtgccagcagtataggagacaagctggtg
gtatccagtctcaagtcctctcctatcccagtgttggagcttgcagaggggaaaaagcag
acacgtgtgagtctgaactcaacgtcccagtacctagtgagtggggggcttgataactct
gttaacatctgggacctaaaggccaagaggcttcatcgcaccctcaaggaccacaaagag
gaggtgacgtgcgtgtccttcaatggcagtgacagctacatcgcctcgggctccaccagt
ggtgacatcatcctgcacagcatcaccaccaacctgtccagtaatgcctttggacacggt
accaaccagcccatccacgacctgaagtactctgtggttaagcgctccctactgggcagt
gtgtcagatagcggatcggtggtcctgtgggacgccaacactcagaaggagctgcacgtg
tttgatggagcccacaaggcccccgcctcgggcctggccttctctcctgccaacgacctg
ctctttgtcaccgttggcctagacaagaagatcatctgctatgacacctccagcaagatt
attctccgcaacatgtgtgtggagtccccgttgacggccattgacttcactccagatggg
gcagggttggtagtgggctccacccagggcagactgtacctgtacgacctgcgcaacctc
agctcccctaccaagactgccgctgcacacaagacctccatcaccagcctgcgcttccag
agctcccagagcagacacctcaagtccagtaaaatagcgtccagcaagtcttccagcgcc
cagacaagcaagaggatctcagccaggctgggtagtacctacctaccagtaactaccccc
agctccacctccaatcccccctctagcctgcctgcaccccatgcagtagaaagaggggat
ggacaagcccagggcacaggcacacacaaagaggcagagggccagctgggtgttgactgc
ctgcctagtctggacaagttcagcagcgtgggtagaaacagcctggacatcttctccccc
gtaaaagacgattacaaagcccacaggatgagtggtgatgctcctggtggaatcaaaggg
aatgcgatcagtttggatatgttctccagagaagggcagcaaagcatggagaagttcagc
aaagtgggacgcaacagtctggacattttctctcctgttagagaggattacaaaacccat
ggaatgactgcagatgaatcaaatgggaagaaagcaaacaatctggacttcctccctacc
tactctggtgggcccccacaacacaagactcccctgggcacccttggaggagggtgctgt
tacagccccctgcctgtcttccagaccccttcaccaatcaaagaggagctagccatgcct
cctgcaccagcacagacagatacacaggactcaaaaaggtatgagaaggacagtggttcc
agtctggagggtgaagccacaaccacgcccacgtcatcagcccagacctcacacagccaa
ccagcacctccgttcttcacccctgaacccggcctgaggaccaatgatgtgcaggcccag
ctgagctacaacacgcccctaaatggtgcgctgcccattattgtaccagtgtctttggca
gtggcatcctcgctatcagagagaatagtggaggctgttggagcagaggatggaggcgct
cccctcacatctctgcagatccagttcatccgcaacatgatccatgagaccctggaagac
ttcagggacgcctgccaccgagacatagtgaacctccaggtggagatggtcaaacagttc
tacattcagctgaacgagatccatggtctgatcgagaagtactctgtcaatgactcgctg
gtggaggagatcgagaagctgagggaggagaacaagcgactccgagacaattactga

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