Salvelinus fontinalis (brook trout): 129867111
Help
Entry
129867111 CDS
T11136
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129867111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129867111
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129867111
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
RESC9_N
Motif
Other DBs
NCBI-GeneID:
129867111
NCBI-ProteinID:
XP_055796271
LinkDB
All DBs
Position
12:29234989..29282571
Genome browser
AA seq
820 aa
AA seq
DB search
MEAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSDAGTPGRSALDS
VEVAYGRQIYLFNEKIVNGHVQPNLGDLCASVVDSLDDKNVSDMWLMVKQMTDVLLVPAK
DTLKSRTSVDMKMAFVTQALQFLENSYKNYTMVTVFGNLHQAQLGGVPGTYQLVCSFLNI
KLPGPLPGMQDGEVEGHPVWALIYYCLRCGDLGAAMQVVNRAQHQLGDFKTWFQEYMNSP
DRRLAPATENKLRLHYRRVLRNSADPYKRAVYCLIGKCDIADNHGEVADKTEDYLWLKLN
QVCFDEDGSNAPQDRLTLAQLQKQLLEDYGESHFSAIQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELGLLLKSSGQSAQLLSQEAGDPPMVRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKNSQGENMFLCCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIITKVALEAENKGLFEEAVKLYELAKNPDKVLELMNRLLSPVIAQVGSTQSN
KERLKNTAVAIAERYRTHGVAGEKSVDSTFYLLLDLMTFFDEYHVGHIDQAYDVMERLKL
VPLSQNSVEERVAAFRNFSDEVRHNLSEVLLATMNILFMQYKRLKGATAGTPGRPQRSME
DRDSQLRSQARALITFAGIIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggagggctttggagagctcctgcagcaggcggagcagcttgcagcggagact
gaggctgtgtctgagcttccccatgttgagaggaaccttcaggagatccagcaggctgga
gagcggctacgttcccgcaccttaacccgaacgtcgcaagacgctgctgatgttaaagcc
tctatcctcctgggttccagaggcctggacatattccacatctcccagcgtctggagagc
ctgagtgctgccaccacctttgaacctctggagccagtgaaagacactgacatccagggg
tttctgaagaatgagagggacaatgcgctgctctctgcaatcgaggagtcacgtcgcagg
acgttcctcctggcagaggagtaccaccgtgagtccatgctggttcagtgggagcaggtg
aagcagagagtactgcacaccttgctgggagcaggggaagatgctctggatttcagccaa
gacgtagagcccagctttgtgagtgacgcagggactcctgggcggagtgctcttgacagc
gtggaggtagcctatggacgacagatctacctcttcaatgagaagatagtgaacggacac
gtccagcccaacctgggcgacctctgtgcctcagtggtagacagcctggatgacaagaac
gtgtcagatatgtggctgatggtgaagcagatgacagacgtgctgctggtcccagccaaa
gacacgctgaagagccgcacgtctgtggacatgaagatggctttcgtcacgcaggccctg
cagttcctggagaacagctacaagaactacaccatggtgacggtgtttgggaacctgcac
caggcccagctgggcggagtccctggcacctatcagctggtgtgcagcttcctcaacatc
aaactaccagggcctctgccaggcatgcaggatggtgaggtggagggtcacccagtctgg
gctctgatctactactgcctgcgctgtggggacctgggggctgccatgcaggtggtgaac
cgggctcagcaccagctgggagacttcaagacctggttccaggaatatatgaacagccct
gacagacgcttggcccctgccacagagaacaagctgcgtctccactaccgcagagtgctg
aggaacagcgctgacccctacaagagggccgtctactgcctcattgggaagtgtgacatc
gcagacaaccatggagaggtggccgacaaaaccgaggactacctgtggctcaagctcaac
caggtgtgcttcgatgaagacggcagcaatgctcctcaggacagactgacactggcccag
ctacagaaacagcttctagaggactatggagagtcccacttctcagccatccagcaaccg
ttcctgtacttccaggtgctgttcctcacggcccagtttgaggctgcggtggccttcctg
ttccgggtggagcgtctacgcagtcatgctgttcacgtggctctggttctctacgagcta
gggctgctgctcaagtcatctggacagagcgcacaactgttgagtcaggaggctggggac
ccccctatggtccgacggctcaacttcatccgtctcctcatgctctacacacgcaagttt
gagtccacagacccccgggaagctctacagtacttctacttcctacggaatgaaaaaaac
agccaaggagagaacatgtttttgtgctgtgttagcgagctggtgattgagagtcgagag
tttgacatgcttctgggaagactggaaaaagatggcagcaggaagcctggagtgattgat
aaatttgctggagacacgcgagccattatcacaaaagtggcgctggaggcagagaacaag
ggcctgtttgaggaagcagtcaaactgtatgagctggccaagaatccagacaaggtccta
gagctgatgaacaggctgctgagtcctgttattgcccaagtgggctccacccagtccaat
aaggagagactgaagaacactgctgttgccatcgctgagcggtaccggacccacggtgtc
gctggagagaagtctgtggacagcaccttctacctgctgctggatctcatgaccttcttt
gatgagtaccatgttggtcacatagaccaggcctacgatgttatggagagactgaagctg
gtccctctgagtcagaacagtgtggaggagagggtcgctgcattccgtaatttcagtgat
gaggtcaggcataatttgtcagaggttctcctggccaccatgaacatcctgttcatgcag
tacaaacgtctgaagggcgccacagcaggaacccctggtcgaccacaaagatccatggag
gacagagactcgcaactgcgcagccaggctcgagcactgatcacgtttgctgggattatc
ccataccgcatggcaggcgacaccaatgcccggctggtgcagatggaggtcctaatgaac
tga
DBGET
integrated database retrieval system
