Salvelinus fontinalis (brook trout): 129867249
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Entry
129867249 CDS
T11136
Name
(RefSeq) protein strawberry notch homolog 2-like isoform X1
KO
K26273
protein strawberry notch
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfon03036
]
129867249
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
129867249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
129867249
NCBI-ProteinID:
XP_055796503
LinkDB
All DBs
Position
12:35573888..35687348
Genome browser
AA seq
1665 aa
AA seq
DB search
MPSLPSPSPAMDGENYLHPEGPQLDSSIFEVPSSNMESYLYPSGSWGSFSQQSGGYSAHC
PMQSGNQQYHLNAPMPDMHMDMFSHSGFHDDFLNLPRNGEFPQDLSCIDDLSNSLFSSPA
DSLSDYADAQAFIPTDNLAHVPTIWDINTPAQSQLELNANRFQGLNSLEDISAIISTPPL
GGYQAQRNQTPAEEDAEEEEEETEELGHVDTYADYKPSKSTIGISHPDIVVETNTLSSVP
PPDITYTLSIPDSTINCGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGRT
VAGIILENYLKGRKKALWFSVSNDLKYDAERDLKDIDAPTIPVHALNKIKYGDTATSEGV
LFATYSALIGESQAGGQHRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLDL
QHNLPLARVVYASATGASEPKNMIYMSRLGIWGEGTPFKTFDDFLHAIEKRGVGAMEIVA
MDMKVSGMYIARQLSFSGVSFRIEEIGLDDDFKLVYNKAAKLWAEALAVFMRAADELCLV
SRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAKKELKAGKCIVIGLQSTGEARTREVLD
ENDGHLDRFVSAAEGVFKALVQKHFPSEKQREKARGNKRKRKPRGRQPKFPKHTMVHLGG
VINISDDSSTDTDGMDTDSNSSPDSLMDNNDDVIFVQHTSCHTASIEKMKQSLLNKITDL
GKELPLNTLDELIDQFGGPEMVSEMTGRKGRVVRRPDGSVRYESRAEQSHTIDHINLKEK
DRFMCGEKMVAIISEAASSGISLQADKRVKNQRRRVHITLELPWSADRAIQQFGRTHRSN
QVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKA
LDKITKAILGHIESKVSPPKGYPGGDALFFRDMKHGMMDVGIFCKEPRFGLSTEKDCSIT
KFLNRILGLEVHKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNNEIYEEKQETF
MTVGNPQDGQVVLYKISVDRGMPWEEAYEKVQNLNSPDEGFYLSHKLRGNHPCVLLAEQG
RGRNFIVYKPNIGKQAHPESLDNLQLRYRKVTPDQAKDSWESQFNFSFGKCSHANWNGKC
KKIEEGQECLQGMRLRQYHMLCGALLRVWKYVADVVSDITCSSILQIVRLKTKNSNKQVG
IKIPENCVARVRQELLKMDEEVKRRRKEKEQQRAQEQRLAEERQLQNQHLLAKLYNQRQT
LNHSFKNQNLSQSLSQGLKTQHLSLAQANPLQVKPLLQPKPSQLKPQLGPVNQLPSMVSP
TSHFSNFPHHFPSSKPPRTGEEVLDLTVSPSPSPDSKERGLVLDCLTRDGFGLDSLILLS
ELAAQNTAHKLQQPLQPLPPLAKPQQLQSPQQIQLQSPQQIQPQLQSPQQIHPQLQSPQQ
IQTQLQSPQQIQPQLQSPQQIQLQSPQQIQPQLQLPQQIQPQLQSPQQIQPQLQSPQQIQ
PQLQSPQPIQPQLQSPQQIQPQLQSPQQIQPQLQSPQQIQPQQRLDSPTLSNCDHQDYYD
ILKLLEDPDHLPYSLSSQTTTNPSTSSNTVAQVSSGLLSSPSTPSSSLFSSSALAPSEQQ
PLPLANGHCSTDALINVREVLDNMLRTSADRQSVIHYRLPEWDSV
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcctcccatcaccctcaccggccatggacggggagaactacctgcacccggag
gggccacagctggacagcagcattttcgaagttccctcttccaatatggagagttatctg
tatccctctggttcctggggatcattttcacagcagtctggaggctacagcgcacactgc
cctatgcaatctggaaaccagcaataccacttgaatgctcccatgcccgatatgcacatg
gacatgttcagccattcaggattccatgacgatttcctcaacctccccaggaacggagaa
ttccctcaggacctgtcctgcatcgatgacctctccaactctctattctcctctccggcc
gactcgctgtcagactacgccgatgcccaggccttcatccccacagataacctggcccac
gtgcccacgatatgggacataaacacaccagcacagagccagctggagctgaatgccaac
aggtttcagggtttgaacagtttggaggatatctctgccattatcagcaccccacctttg
ggaggataccaggctcagagaaaccagactccggcagaagaggatgcagaggaggaggag
gaagagacagaggagctgggacatgtagacacctacgctgactacaaaccatccaaatcc
accatagggatctcccacccagacatagtggtggagaccaacacgctctccagcgtccct
ccacctgacatcacctacactctgtccattcctgactccaccatcaactgtggcctgctc
tctgccctgcagctagaggccatcatctacgcatgccagcaacacgaggtaattctgcag
aacaaccagagagcaggcttcctgataggagacggggctggagtagggaaaggccgcacg
gtggccggcatcatcctggagaattacctaaagggaaggaagaaagcgctatggttcagt
gtatccaatgacctgaaatacgacgcagagagagatctgaaagacatagatgctcccacc
attcctgtgcatgccttaaacaagataaagtatggagacacagctacctcagaaggagta
ctgtttgcgacatactctgcactgatcggagagagccaagcaggggggcagcaccgcacc
agactcaagcagatcctggactggtgcaagccaggctttgatggagttattgtgtttgac
gaatgccacaaggccaagaatgctacgtccaccaagatgggcaaggccgtgctagacctg
cagcacaacctgccgctggccagggtggtttatgccagtgccacaggtgcctctgagcca
aagaacatgatctatatgagccgcctggggatctggggcgagggcacgcccttcaagacc
tttgacgacttcctgcacgccatcgagaagaggggtgtaggcgccatggagattgttgcc
atggacatgaaggtgagtgggatgtacatcgcccggcagctgagcttctcaggggtgtcc
ttccgcatcgaggagatcggtctggacgacgacttcaaactggtctacaacaaagctgcc
aaactgtgggcggaggcgctggccgtgttcatgcgtgcagcggacgagctgtgtctggtc
agcaggaagtccctgtggggtcagttctggtcttcccaccagcgcttcttcaaatacctc
tgcatcgccgccaaggttcgctgcctggtggagctggccaagaaagaactgaaagctggc
aagtgcatcgtgattggtctacagtccacaggagaggcccgaaccagagaggtcctggat
gagaacgatgggcacctggacagattcgtatctgcagcagagggtgtgttcaaagctctg
gtacagaaacactttccctccgagaagcagagagagaaggcgcgtggaaacaagagaaaa
cgtaagcccaggggccggcagcccaaattcccaaagcataccatggtgcatctggggggc
gtgatcaacatcagtgacgacagcagcacggacacggatggcatggacaccgactccaac
tcctcgccagactccctgatggacaataacgatgacgtcatcttcgtccagcacaccagc
tgtcacacagccagtatagagaagatgaagcagagcctcctgaacaagatcactgacctg
ggaaaggaactacctctgaacactctggacgagctcattgaccagtttggaggaccagag
atggtatcggagatgacgggtcgtaagggtcgcgtggtgcggcgtcctgacggaagcgtg
cgttatgagtcgcgtgcagagcagagccataccatagaccacatcaacctcaaggagaag
gaccgcttcatgtgtggagagaagatggtggccatcatctcggaggcggccagctcgggc
atctccctgcaggcagacaagcgggtgaagaaccagcgtcggagggtccacataacccta
gagctgccctggagtgcagacagagccatccagcagtttggtcgtacacatcgctctaac
caggtgacggctccagagtatatcttcctcatctctgagctagccggggaaagacgcttc
gcctccattgtggccaagagactggagagcctgggtgcattgacccacggtgacaggaga
gccacagagtccagagacctgagcaaatacaactttgaaaacaagtacggtaccaaggct
ctggataagatcaccaaagccatcctgggccacatcgagagcaaggtgtcccctcccaaa
ggttaccccgggggtgatgctctgttcttcagagacatgaagcatggcatgatggatgtg
ggtatcttctgcaaggagccaaggtttggtctcagcactgagaaagactgcagcatcacc
aaattcctcaacaggatcctgggcctggaggtccacaagcagaactctctgttccagtac
ttcaccgacaactttgactacctgatcgagaaggacaaaaaggagggcaaatacgacatg
ggaatcctagatctggccccaggtaacaatgaaatctacgaggagaagcaagagaccttc
atgacagtgggaaacccccaggacggacaggtcgtgctctacaagatcagcgtggacaga
ggtatgccctgggaggaggcctatgagaaggtccagaacctcaacagtcctgacgagggc
ttctacctatcccacaagttgcgagggaaccacccgtgtgtgctgctggcggagcagggt
cgagggaggaacttcatagtgtacaagcccaacatcggcaagcaggcccacccagagagc
ctggacaatctgcagctacgctaccgcaaggtgactccagaccaagccaaggacagctgg
gagagccagttcaacttctcctttgggaaatgtagccatgctaactggaacgggaagtgt
aagaagatcgaagagggtcaggagtgtctgcagggaatgcgtctgcgccagtaccacatg
ctgtgtggtgcgctactgcgcgtctggaagtatgttgccgacgtggtctctgacatcacc
tgctccagcatccttcagatcgtacgcctcaaaaccaaaaatagtaacaagcaagtcggt
atcaagatcccagagaactgtgtggcccgagtgcggcaggaacttctcaaaatggacgag
gaggtgaagagaaggcgcaaagagaaggagcagcagcgcgcccaggagcagcggctagcc
gaggagcggcagcttcagaaccaacacctgctggccaagctttacaaccagagacagacc
ctaaaccacagcttcaagaaccagaacttgtcgcagagcctcagccagggcctcaagacc
cagcacctgagcctggcccaggccaatcctctacaggtcaagcctctactccagcccaaa
ccttcacagctcaaaccccagctcggtccagtcaaccagctccccagcatggtcagcccc
acctcccacttctccaatttcccccaccacttcccctcctccaagccccctcggaccggg
gaggaggtcttagacctgacggtgagcccctctccctccccagacagcaaagagagaggc
ctggtcctcgactgcctgaccagagacggctttggcctggactctctgatattgctgagc
gagctcgccgcccagaacactgcacacaaactgcagcaacctctacagccactgccacca
ctggcaaagccacagcagctacagtcgccacagcagatacagctacagtcgccacagcag
atacaaccgcaactacagtcgccacaacagatacatccacagctacagtcaccacagcag
atacaaacacagctacagtcaccacagcagatacaaccacagctacagtcgccacagcag
atacagctacagtcaccacagcagatacaaccacagctacagttgccacagcagatacaa
ccacagctacagtcgccacagcagatacaaccacagctacagtcgccacagcagatacaa
ccacagctacagtcgccacagccgatacaaccacagctacagtcgccacagcagatacaa
ccacagctacagtcgccacagcagatacaaccacagctacagtcaccacagcagatacaa
ccacagcaacggttggacagtccgactctaagcaactgcgaccaccaggactactatgac
atcctcaaactgctggaagatccagaccatctgccttactctctgtctagccagacaact
actaacccctccacttcctccaacacagtggctcaagtctcgtccggcctcctctcttcc
ccctctaccccctcctcctctctcttctcttcttcggccctggccccctcagaacagcag
ccgctccctctggccaacggccactgcagcacggacgccctcatcaatgtgcgcgaagtg
ctggacaacatgctacggaccagcgcagaccggcagtcggttatccattaccggctgcct
gaatgggactctgtgtaa
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