Salvelinus fontinalis (brook trout): 129867300
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Entry
129867300 CDS
T11136
Name
(RefSeq) retinal homeobox protein Rx1-like
KO
K09332
retina and anterior neural fold homeobox protein
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129867300
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
129867300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
MTPAP-like_central
Csf1_N
Motif
Other DBs
NCBI-GeneID:
129867300
NCBI-ProteinID:
XP_055796581
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All DBs
Position
12:complement(36990151..37004826)
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AA seq
336 aa
AA seq
DB search
MHLSLDTMSAVDDSCLSPSNFHEMVKGGGAVMGGRVHSIDVILGFSKDQDPLLTPSEGPG
PHKVGVDGLGDPGKQDLSHPYGHLSEQESYHAYVNLFFLPIGSTDSGLYLDKCDGDMSEL
RKNVDSNGGKSPEPCEEERPKKKHRRNRTTFTTYQLHELERAFEKSHYPDVYSREELAMK
VNLPEVRVQVWFQNRRAKWRRQEKLDATTMKLHDSPMLSFNRPSMHSNMGPMSNSLPLDP
WLTSPLSSTTPVHSIPGFMGTGQGLQGGYPSHSFLNSPPPMGQGMQSMAPPPYQCSGPFT
DKYPMEDVDQRSSSITALRMKAKEHIQSMDKTWQPM
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatcattggataccatgagtgcggtggatgacagctgcctctcgcccagtaac
ttccacgagatggtgaaaggagggggggcggtgatgggcggccgcgtccacagcattgat
gtcatcctgggcttcagcaaagaccaggaccccctgctcaccccctctgagggtccagga
ccacacaaagtgggcgtggatggcctgggggaccctgggaagcaggacctgtcacacccc
tatgggcacctctcagaacaggagtcctaccatgcatatgtgaatctcttctttctccct
atcggctctacagattcaggactgtatttagataagtgtgatggggacatgagtgagctg
aggaagaatgtggacagcaacggtgggaagagtccagagccctgcgaggaagagcggccc
aagaagaagcaccgacgcaaccgcaccacctttaccacctaccagctgcacgagctggag
cgtgcctttgagaagtcccactaccctgatgtgtacagccgtgaggagctggccatgaag
gttaacctccctgaagtcagagttcaggtgtggtttcagaaccgcagagccaaatggagg
cgccaggagaagcttgacgccaccaccatgaagttgcacgactcacccatgctctcattt
aaccggccgtccatgcacagcaatatggggcccatgagcaactccctcccattggaccct
tggctgacctcccctctgtccagcaccaccccagttcatagcatcccaggcttcatgggc
acaggccagggactgcagggaggctaccccagccacagcttcctcaacagccctccaccc
atgggccaggggatgcaatccatggcacctcctccgtaccagtgttccggtcccttcacc
gataagtatccaatggaggacgtggaccagaggagctccagcatcacagcgctgaggatg
aaagccaaggaacacatccagtccatggacaaaacctggcagcccatgtga
DBGET
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