Salvelinus fontinalis (brook trout): 129867349
Help
Entry
129867349 CDS
T11136
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon02010
ABC transporters
sfon04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
129867349 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129867349 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfon02000
]
129867349 (abca7)
Transporters [BR:
sfon02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
129867349 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
129867349
NCBI-ProteinID:
XP_055796674
LinkDB
All DBs
Position
12:complement(38630128..38672262)
Genome browser
AA seq
2350 aa
AA seq
DB search
MGIGTQLLLLLWKNITYRRRNKVQLIIELVWPLFLFLILISVRHSHPPYKQSQCHFPNKA
LPSAGTLPWVQGIICNINNPCFHNPTQGETPGRVGNFDNSILSRLLVDSQTILSYSGNQT
AFSGFQDLLDTIRRLGERPGAWPNLPVGEYLRANQTFSNFLLTNGSLSPSALDQLFRARL
NFQVVSLAGTGVMLKDIVCNATVLSQFLTVDQEDSMAELQSQLCAIPADTLQQAEQLFLS
QLDFSKFFTRDRLRANAGDLRVISQAVTSVSKELAVLMDDLSSLASFRELNLELRLLSPE
NRSTLPRESFRAFSRIMCGHPEVGGERIPSLNWYEDNDIKSFLGKNGTEDNDMDKDNVTT
PYCKSLIQSLESNPLSRIVWRGIKPLFIGKLLYTPDTPAVRDVMKEVNKTFQDLQILEEL
NGAWMEVAPGIKTYMESSVEIQLLQDLLRRPEVAVLVNLQLENTSWTAKRIARFLSTPNE
PRKEGAPPTWLDVYSDLNNTITTLAQVTQCFSLNKLEGAATEGQMIDRALELLEEREFWA
GIVFLLPNTSLPGLPPHVTYKIRMDIDDVARTNKIKDRFWDPGPAADPFSDMRYIWGGFV
YVQDLVERAVARVLSGVEQYTGLYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVAM
IIKGVVYEKEARLKETMRIMGLGTGQLWVSWFISSLVPFLVSAGLLIALLKWGDILPYSN
PAVVFFFLTAFATATIMQCFLISTFFSRANLAAACGGLIYFALYLPYVLCVAWRDHLTTT
HRVLASLFSPVAFGFGCEYFSQYEEQGVGIQWFNLHSSPMEGDTYNFTTSIIMLHIDACI
YALATWYIEAVFPGEYGVPRPWNFVFSLNYWGGIPLEAGMPIPPAPRGQGGDRIEADPSH
LILGVAIRNLVKIYKQGAKLAVNHLNLKFYEGQITSFLGHNGAGKTTTMSILTGLFPPTA
GTVYIKGMDIRTDMDIIRKTLGVCPQHNVLFDILTVEEHVWFYGRLKGLSGDEVRKELDT
LLEDVGLLHKRHEQTRNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDLL
LKYRKDCTIILSTHYMDEADLLGDRIAIISQGKLCCCGSPLFLKAKLGMGYYLTVVKKEG
LDTRTPSSASATKLPPATKDSDSSMSDDTGLGSDVSGSDLAALLTLAQRHIPGARLVEDV
GREAVINLPQKSAEDSSLAIFLTELDRRQADLGITSYGLSDTTLEEIFLRVAEETGVDVD
PEDSPGQADIPHGQGQGQGFSGEPSEDPGRKRLRKQEPQETDLLSGDGHGGVPLTGWGLT
WQQLRALFIKRWLYALRSRRGFFAQIVLPAVFVLIALLFSLIVPPFGKYPSLQLQPWMYG
EQYTFFSNDAPGDPAIQNLLDALLDRPGFGTKCMENSTDPQCLQEEEGMFMRPQILYSTW
QLFNRGNWTADKPSPDCECSSEEVRRMLPECPEGAGGIPPPQVQRLTGDILQNMTGRNIS
DYLVKTYPQIMKKSLTSATKKWINEFRYGGFSLGGRGTQAVPQAYQMEDSVMSIRSRYKV
AQNSSLDQLLGRLPEFLGGLNSQNNVKVWYNNKGWHAMASFVNVMNNGLLRASLPPGPER
MKYGITVYNHPLNLTKEQLTEIAMMTTSVDVLVSICVIFSMSFVPASFVLFLIEERVSKA
KHLQFVSGVRPILYWLANFTWDMLNYTVPATMVVLIFICFQQQSYVSETNLPALVLLLLL
YGWSITPLMYPASFLFSVPSTAYVVLTSINLFIGINGSIATFVLELFVDQHLNDINKILK
KVFLIFPHFCLGRGLIDMAKNQAMSDAFQRLGAKQTLDPLEWDFVGKNLFAMAVEGVVFF
LFTILLQYKFFVNCRPCSEPELPPLGPEDEDIARERERVKSGKAQADILTMMDLSKVYKA
GKKPAVDRLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTAITYGEAFLSHHSVLTEMER
VHQLMGYCPQFDAICDLLTGREHLEFYARLRGVPEESVAKVAQWGVKKLGLTQYAEREAG
GYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVIKEGRAVVLTSHS
MEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIVLRLLGTKPPEDPCPVDTYIKG
SFPGIELKERHQNVLQYQLPSHSCSLARVFDVLSNNHEELGIADYSVSQTTLDQVFVNFA
KEQTDDDLLREVTVNGGTPAPQPRRAAQPTQPGQTAKPAQTTKPPQSVKSSDGRPRETKP
NGVTDSGMAMTSRPQERPQSSRGESRRELSSRKSSKESSANGSKGTRETSGNKDPTSLFL
VGSSTQDSSV
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgggactcagctcttgctcctgctctggaagaacatcacttaccgcaggagg
aacaaggtccagttgattatcgagctggtctggcctctgttcctcttcctcatcctcatc
tcagtgcgtcactctcatcctccctacaaacagagccaatgtcatttccccaacaaggca
cttccctcagcaggcaccctgccatgggttcaggggatcatctgcaacatcaacaacccc
tgcttccacaaccccactcagggggagaccccagggcgggtgggcaactttgacaactcc
atactctctcgactcttagtggactcgcagacaattctgtcctacagtggcaaccagaca
gccttctctggctttcaggaccttctagacactatacggagacttggagagaggccaggc
gcctggccaaatcttcctgtgggagaatacctgcgagccaatcagaccttctccaacttt
ctcctgaccaatggcagcctgtctccctctgccctagaccagctgttcagggctcgcctg
aactttcaggtggtgtctctggcaggcactggggtgatgctgaaggacattgtgtgcaat
gccactgtgctgagccagttcctcactgtagatcaagaggattctatggcggagctgcag
agccagctctgtgccatcccagccgacaccctgcagcaagcagagcagctcttcctctcc
cagctggacttcagcaagttcttcacgagagacagactgagggccaacgccggtgacctc
cgggtcatcagtcaagcggtcacctccgtgtccaaggagttggcagtactcatggatgac
ctgtcctctctcgctagctttagggagttgaacttggagctgcgtctgctctcgccagag
aaccgttcgaccctgccacgggagagcttcagggccttctccaggattatgtgtggccac
cctgaggtgggcggcgagaggatcccttcactcaactggtacgaggacaacgacatcaag
tccttcctgggcaagaacggcaccgaggacaacgacatggacaaggacaacgtcaccacc
ccgtactgtaaaagcttgatccagagcctggagtccaacccactgtctcgcatcgtgtgg
cgagggatcaagcccctgtttattggcaaactgctgtacacaccagacacccctgccgta
cgcgatgtcatgaaagaggtgaacaagaccttccaggacctgcagatcctagaggagctg
aatggtgcctggatggaggtggcacctggtatcaagacctacatggagagtagtgtggag
atacagctgctgcaggatctgctgaggcggccggaggtggccgtgttggttaatctgcag
ctggagaacacttcctggacagccaagcgcattgcccgcttcttgtccacgcccaatgaa
cccaggaaagaaggagcgccccctacctggctggacgtgtactccgacctgaacaacacc
atcaccactctggctcaagttacccagtgtttctccctgaacaagctggagggtgctgcc
acagagggacagatgattgacagggccttggagctgctggaagagagagagttctgggct
gggatagtgttcctccttcccaacacgtctttacccggtctgccccctcatgtcacctac
aagatccgcatggacatcgacgatgtcgcacgcaccaacaagatcaaggacaggttctgg
gacccgggcccagcagcggacccgttcagtgacatgcgctacatctgggggggctttgtg
tacgtacaggacctggtggagagagctgtggcccgtgtgctgagtggtgtggagcagtac
actggcctctacatccagcagatgccctacccctgctacgtggatgacgttttcctacgc
gtgctgaaccgctcgctgcccctattcatgacgctggcgtggatctactctgtggccatg
atcatcaagggcgtggtgtacgaaaaggaggcgcggctcaaggagaccatgaggatcatg
gggcttggtacaggccagctgtgggtcagctggttcatcagcagcctggtgcccttcctg
gtcagcgccggccttctcattgctctgctcaagtggggggacatcctgccctacagcaac
ccggctgtggtgttcttcttcctgacggccttcgctacggccaccatcatgcagtgtttc
ctcatcagcactttcttctcccgggccaacctggcagccgcctgcggaggcctcatctac
ttcgccctctacctgccatatgtgctgtgtgtggcctggagagaccacctcaccaccaca
caccgtgtcctagcaagtctgttttctcctgtggcctttggctttggctgtgagtatttc
tcccagtacgaggaacaaggagtgggcatacagtggttcaacctgcactccagccccatg
gagggagacacctataatttcaccacttccataatcatgctgcatatcgatgcatgtatc
tacgctctggccacctggtacattgaagctgttttcccaggtgaatatggggtccccagg
ccatggaacttcgtgttcagtttgaactattggggaggaattcctctagaggccggcatg
cccatccctccggctcccaggggacagggaggagatcgcatcgaagccgacccctctcac
ctcatactcggtgtggccatccgcaacctggtcaaaatctacaagcaaggtgccaagctg
gcggtcaaccacctcaatctcaagttctatgaagggcagatcacctctttcctggggcac
aacggtgctggcaaaacaaccaccatgtctatcctgacgggtctgtttccccccacggct
gggactgtgtacattaagggcatggacatccgcactgacatggacatcatcaggaagacc
ctgggagtgtgtcctcagcacaatgtcctttttgacattctgaccgtagaggagcatgtg
tggttctatggtcgtctgaagggcctatcaggcgatgaggtgaggaaggagttggacact
ctcctggaggatgtgggcctgctgcacaaacgccacgaacagaccaggaacctgtctggt
ggtatgcagaggaagctgtcggtggccatagcatttgtggggggttcgaaggtggtggtc
ctggatgagcccacagctggggtggacccctactcccgtcgaggcatttgggacctgctg
ctcaagtaccgcaaagattgcaccatcatcctctccacccactacatggatgaggctgac
cttctcggagaccgaatagccatcatctcccaggggaagctgtgctgctgcggctccccc
ctcttcctcaaggccaagctggggatgggctactacctcaccgtcgtcaagaaggaggga
ctggatactcgaacccccagtagtgccagcgctaccaaactgccccctgccacaaaggac
agcgactcctccatgagtgacgacacaggtctgggcagtgatgttagcggctcagacctg
gctgccctgttgaccctggcacagcgtcacatccccggggcgcggctggtggaggacgtg
gggcgtgaggcggtcatcaacctgccccagaagtcggcagaggacagcagtctggccatc
ttcctcacagagcttgacaggaggcaggctgatctgggcatcaccagctacggcctgtct
gacaccaccctggaggagatctttctgagagtggctgaggagacaggggtggacgtggac
ccagaggacagcccaggacaagccgacataccccatgggcagggtcaaggacagggcttt
tctggagagccatctgaggatccaggaagaaaacggcttcgcaagcaagagccccaggag
acagacctgctgagtggggatggccatggcggtgtccctctgaccggttggggtttgacg
tggcagcagttgcgtgcgctcttcatcaagaggtggctgtatgccctccgcagtcgcagg
ggctttttcgctcagatcgtgctgcctgctgtgtttgtgttgatcgctctccttttcagc
cttatcgtccctccgttcggaaagtacccctcgctccagctacagccctggatgtatggg
gaacagtacaccttcttcagcaacgatgcccctggggatcctgccattcagaatctgctg
gatgcccttctggaccggcctggatttggaaccaagtgcatggaaaacagcacggatcct
cagtgtttgcaggaggaggaaggcatgttcatgaggccccagattctctactccacctgg
cagctcttcaacaggggcaactggactgcagacaagccatctcctgactgtgagtgcagc
tctgaggaggtccgcaggatgctaccagaatgccccgaaggagccggaggcatcccccct
ccacaggtccagagattgacaggggatatcctgcagaatatgaccggccgcaatatctcg
gactacctggtcaagacttaccctcagataatgaagaaaagcctaacttcagccactaag
aagtggatcaatgaattcagatatgggggcttctctctggggggcagaggtactcaggct
gtcccacaggcctaccaaatggaggactcagtcatgtctatacgatcacgttacaaagtg
gcacagaatagctcattggatcagctcctgggtcgcctaccagagtttctgggtggactg
aatagtcagaacaatgttaaggtgtggtataacaacaagggttggcacgccatggcatcg
tttgtcaatgtcatgaacaatggcctgctccgtgccagcctgcccccagggccagagcga
atgaagtatggcataaccgtctacaaccaccctctcaacctcaccaaggaacagctcact
gaaattgccatgatgaccacctcagtagatgttctggtgtccatctgtgtgatcttctcc
atgtcctttgtgccggccagctttgtgctgtttctcatcgaggagagggtcagcaaagcc
aagcaccttcagtttgtcagcggagtccggcccattctctactggctggctaacttcacc
tgggacatgctgaactatacagtcccggccactatggtggtcctgatcttcatttgcttc
cagcagcagtcctatgtgtctgaaaccaacctccctgctctggtcctgttgctcttgctt
tatggctggtctatcactcctctcatgtatccagcctccttcctgttcagtgtccccagc
actgcttatgttgtcctcacctcaatcaacctcttcatcggcatcaacggcagcatagcc
acctttgtcttggagctgtttgtagatcagcacttgaacgatatcaacaagatcctaaag
aaagtcttcctgatcttcccccacttctgtctgggtcgaggcctcatcgacatggctaag
aaccaggctatgtcggacgctttccagagactgggcgcaaagcagaccctggaccccctg
gaatgggactttgtggggaagaacttgtttgccatggctgtggagggtgttgtgttcttt
ctcttcacaatcctgctacagtacaaattctttgtcaactgcaggccctgctctgagcct
gagttgccgcctcttggcccggaggacgaggacatcgccagggagagagagagagtgaag
agtgggaaagcccaagccgatatactcaccatgatggacctgagtaaggtgtacaaagct
ggcaagaagccagcagtagatcgtctgtgtctgggtattcctcgtggagagtgctttggc
ctgctgggggtaaatggggctgggaagacctccacgtttcgcatgctgactggagacact
gcgatcacctatggagaagcatttctcagtcatcacagtgtgctgacggagatggagcgg
gtccaccagctgatgggctactgcccccagtttgatgccatctgtgacctgctgactggc
agggagcacctggagttctacgctaggctccgaggggtgccagaggagtctgtggccaag
gtggctcaatggggagtgaagaagctggggctgacccagtacgcagagcgagaggccgga
ggctacagtggaggcaacaaacgcaaactctccactgctatctccctgatcggagctcct
cctgttatattcctggatgagcccaccactggcatggaccccaaggccaagagattcctg
tggaactgcatcctgagcgtcatcaaggagggaagggccgttgttctcacctcccacagt
atggaggaatgcgaagctctctgcacacgaatggccatcatggtgaacggaaggttccag
tgtctgggctccgttcagcaccttaagaacaggttcggcgacggctacacgatcgtcctg
cgcctgttggggaccaagcctcccgaggatccgtgcccggtggacacctacatcaagggc
tccttcccgggcatcgagctaaaggagaggcaccagaacgtgctgcagtaccagctgccc
tctcactcctgctccttggcgcgggtcttcgatgtgctttccaacaaccatgaggagctg
ggcatcgccgactactcagtgtcacagaccaccctggatcaggtgtttgtcaactttgcc
aaagagcagaccgatgacgacctgctgagggaagtgacagtcaacggtgggacaccagca
cctcaacccagaagagcggcccagcccacccaaccagggcagacagccaaaccagctcaa
acaaccaagcctccccagtctgtcaagtcctcagacggcagacccagagagaccaagcca
aacggggtcacggacagtggcatggcgatgacaagcaggccacaggagaggccccagtcg
agcaggggagagagcaggagagagttgagtagtcggaagtcaagcaaagaatcgtccgcc
aacggatccaagggcacaagggagacttcaggcaataaggatccgaccagtctgttccta
gtgggtagcagcacacaagacagcagtgtgtaa
DBGET
integrated database retrieval system
