Salvelinus fontinalis (brook trout): 129867423
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Entry
129867423 CDS
T11136
Name
(RefSeq) claudin-1-like
KO
K06087
claudin
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03272
Virion - Hepatitis viruses
sfon04382
Cornified envelope formation
sfon04514
Cell adhesion molecule (CAM) interaction
sfon04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
129867423
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129867423
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
129867423
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129867423
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sfon03037
]
129867423
04147 Exosome [BR:
sfon04147
]
129867423
Cilium and associated proteins [BR:
sfon03037
]
Other cilia and associated proteins
Stereociliary proteins
129867423
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
129867423
Exosomal proteins of colorectal cancer cells
129867423
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM37
TMEM61
DUF202
TMEM_230_134
Sugar_transport
DUF1218
DUF7937
Atthog
DUF6594
L6_membrane
Motif
Other DBs
NCBI-GeneID:
129867423
NCBI-ProteinID:
XP_055796788
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All DBs
Position
12:complement(41173472..41180103)
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AA seq
217 aa
AA seq
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MTSSAVQLPGYALALIGLVGSMIATTMVEWKRHSYTESTVTSKETYLGLWMSCTVDVTRH
TMCVNYKSLFHLPAEILTTRVVMILSVMLSAVGVLVATLGMRCTRCLEEDEKQKDRVAIV
GGFLFVIAGVLAISVTSWFANAIIRSFEFSDSPTSLHNRFEFGNAVLVSWGAGICTVVGG
FLLGCGYLWSCPQGSRSVSSFTQPKVIPGTRPGTHYV
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacgagctctgcggttcaacttcccggttatgctcttgctttgatcggtcttgttggc
tcaatgattgccaccactatggtggagtggaaaaggcactcttacacagagagcacggta
acatcaaaggaaacttacctggggttatggatgtcatgcacagtcgacgtcacaagacac
acgatgtgcgtcaattacaagtcactctttcacctgccagctgagattctgaccacccga
gtggtgatgatcctcagtgtcatgttgtcagccgttggggtgctggtagccacgctgggg
atgagatgcacccgatgcctggaggaggatgaaaagcagaaggacagagtagccattgtt
ggaggattcctcttcgtcatcgcaggtgttctggccatatcggtaacctcctggtttgcc
aacgccatcatccggtcctttgaattctcagactcacctacttccttacataacagattt
gagtttggcaacgctgtgctggtgagctggggtgcaggtatctgcactgtggtgggcgga
tttctcctgggctgcgggtatctgtggagttgtccccagggctcacgctcagtctcatcc
ttcacccaacccaaagtaatccctggcacccggcctggcacccactatgtttaa
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integrated database retrieval system