KEGG   Salvelinus fontinalis (brook trout): 129867423
Entry
129867423         CDS       T11136                                 
Name
(RefSeq) claudin-1-like
  KO
K06087  claudin
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03272  Virion - Hepatitis viruses
sfon04382  Cornified envelope formation
sfon04514  Cell adhesion molecule (CAM) interaction
sfon04530  Tight junction
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    129867423
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    129867423
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    129867423
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    129867423
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sfon03037]
    129867423
   04147 Exosome [BR:sfon04147]
    129867423
Cilium and associated proteins [BR:sfon03037]
 Other cilia and associated proteins
  Stereociliary proteins
   129867423
Exosome [BR:sfon04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   129867423
  Exosomal proteins of colorectal cancer cells
   129867423
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 TMEM37 TMEM61 DUF202 TMEM_230_134 Sugar_transport DUF1218 DUF7937 Atthog DUF6594 L6_membrane
Other DBs
NCBI-GeneID: 129867423
NCBI-ProteinID: XP_055796788
LinkDB
Position
12:complement(41173472..41180103)
AA seq 217 aa
MTSSAVQLPGYALALIGLVGSMIATTMVEWKRHSYTESTVTSKETYLGLWMSCTVDVTRH
TMCVNYKSLFHLPAEILTTRVVMILSVMLSAVGVLVATLGMRCTRCLEEDEKQKDRVAIV
GGFLFVIAGVLAISVTSWFANAIIRSFEFSDSPTSLHNRFEFGNAVLVSWGAGICTVVGG
FLLGCGYLWSCPQGSRSVSSFTQPKVIPGTRPGTHYV
NT seq 654 nt   +upstreamnt  +downstreamnt
atgacgagctctgcggttcaacttcccggttatgctcttgctttgatcggtcttgttggc
tcaatgattgccaccactatggtggagtggaaaaggcactcttacacagagagcacggta
acatcaaaggaaacttacctggggttatggatgtcatgcacagtcgacgtcacaagacac
acgatgtgcgtcaattacaagtcactctttcacctgccagctgagattctgaccacccga
gtggtgatgatcctcagtgtcatgttgtcagccgttggggtgctggtagccacgctgggg
atgagatgcacccgatgcctggaggaggatgaaaagcagaaggacagagtagccattgtt
ggaggattcctcttcgtcatcgcaggtgttctggccatatcggtaacctcctggtttgcc
aacgccatcatccggtcctttgaattctcagactcacctacttccttacataacagattt
gagtttggcaacgctgtgctggtgagctggggtgcaggtatctgcactgtggtgggcgga
tttctcctgggctgcgggtatctgtggagttgtccccagggctcacgctcagtctcatcc
ttcacccaacccaaagtaatccctggcacccggcctggcacccactatgtttaa

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