Salvelinus fontinalis (brook trout): 129867461
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Entry
129867461 CDS
T11136
Symbol
psmd1
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1 isoform X1
KO
K03032
26S proteasome regulatory subunit N2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
129867461 (psmd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sfon03051
]
129867461 (psmd1)
Proteasome [BR:
sfon03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
129867461 (psmd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT_EZ
Nop52
Zip
PA26
Tim54
Cnd1
Motif
Other DBs
NCBI-GeneID:
129867461
NCBI-ProteinID:
XP_055796866
LinkDB
All DBs
Position
12:43798964..43863257
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AA seq
971 aa
AA seq
DB search
MITSAAGIISLLDEEEPQLKEFALHKLNSIVNDFWAEISGSVDKIEVLYEDETFRSRAFA
ALVASKVFYHLGAFDESLNYALGAGDLFNVTDDTEYVETIIAKCIDHYTKQRVENAELPE
DEEKKSIDPRLEGIVNKMFLRCLGDHKYKQAIGIALETRRLDIFEKTILESNDVSGLLAY
SLKVCMSLMQNKKFRNEVLRVLVKLYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKE
DNLLMAYQICFDLYESASQQFLSSVIQNLRTVGTPIPAVPGSTNTGTVPIPDKDSDAMET
DDKASSSPAGKASDSKDEPKDQNAKMIKILSGEMAIEFHLQFLIRNNNTDLMILKNTKDA
VRNSVCHTATVIANSFMHTGTTSDQFLRENLEWLARATNWAKFTATASLGVIHKGHEKEA
LQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKNASNDIVRHGGGL
GLGLAALGTARQDVYDLLKSNLYQDDAVTGEAAGLALGLVMLGSKSAQAIEDMVGYAQET
QHEKILRGLAVGIAMVMYGRMEEADTLIESLCRDKDPILRRSGMYTVGMAYCGSGNNKAI
RRLLHVAVSDVNDDVRRAAVESIGFIMFRTPEQCPSVVSLLSESYNPHVRCGAAMALGIC
CAGTGNKEAINLLEPMTNDPVNYVRQGALISSALIMIQQTEVTCPKVNQFRQLYSKVIND
KHDDVMAKFGAILAQGILDAGGRNVTISLQSRTGHTHMPSVVGLLVFTQFWFWFPLSHFL
SLAFTPTAIIGLNKDLKMPKVQYRSNCKPSTFAYPPALEVPKEKEKEKVSTAVLSITAKA
KKKEKEKEKKEKEEEKMEVVSEVQEAEKEKKDDEKEKEKEKEKEKKKEPEPNFQLMENPA
RVMPAQLKVLNMPETCRYQPFKPLHTGGIIIMKDTSEEEEELVEPVSAHGPKIEEEEQEP
EAPESFEYVDE
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgataacgtctgccgctggaatcatctcactgctggatgaggaggagccccaactcaag
gagtttgctctgcacaagctgaactccattgtcaatgacttctgggctgagatatcggga
tctgttgacaaaattgaggtcctgtatgaagatgagacatttcggagcagggcatttgct
gccttggtggcttccaaagtgttctaccacctcggggcgtttgatgagtcgttgaactac
gctctgggtgcaggagaccttttcaatgtcacagacgacactgaatatgtggagaccatt
atcgccaaatgcattgatcactacaccaagcagcgggtggagaacgctgagcttcctgag
gacgaggagaagaagagcatcgacccgcggctggagggcatcgtcaacaagatgttcctg
cgttgcctgggcgaccataagtacaagcaggccatcggcattgccttggagactcgacgc
ctggacatcttcgagaagactatccttgaatcgaatgacgttagtggcctactggcctac
agcctgaaggtctgcatgtcactaatgcagaacaagaagttccgcaacgaggtcctccga
gtgctggtcaagctctacatgaatctggagaagcctgacttcatcaacgtttgccagtgc
ctgatcttcctggatgacccacaggcggtgagcgacatcctggagaagctggtgaaggaa
gacaacctgctgatggcctaccagatctgctttgacctgtacgagagtgccagccagcag
ttcctctcctccgtcatccagaacctgcgcaccgtgggcacgcccatccccgccgtgcct
ggctccaccaacacaggcactgtgcccatcccagacaaagacagtgatgctatggagaca
gacgacaaggccagcagctcccctgcaggaaaagcatcagacagtaaggacgagcctaag
gaccagaacgcaaagatgatcaaaattctcagtggagaaatggccatcgaatttcatctg
cagttcctcatccggaacaacaacacagacctaatgattctcaagaacacaaaggatgct
gtccgaaattcagtgtgccacacagccacggtcatagccaactccttcatgcatacgggg
accacaagtgaccagttcctcagggagaacttggagtggcttgcaagagccaccaactgg
gccaagttcacagccacagccagtcttggcgtcattcacaagggtcacgagaaagaggca
ctgcagttgatggccacctatctgcccaaagacacctcacccggatcagcctaccaggag
ggaggcggcctgtatgccctcgggctaatccatgccaaccacgggggggacatcattgac
tacctgctcagtcagctcaagaacgccagcaacgacattgtccgtcacgggggaggtctg
ggcctgggattggctgctttgggtacagccaggcaggatgtgtacgatctgctcaagtct
aacctgtaccaggacgatgcagtcacaggcgaggcggcgggactggccctagggctcgtc
atgctgggctccaagtctgcccaggccatcgaggacatggtgggctacgcccaggagact
cagcacgagaagatcctgcgcggcctggccgtgggcatcgccatggtgatgtacggacgc
atggaggaggcagacacgctcatcgagagcctctgcagggacaaggaccccatcctgcgc
cgctccggaatgtacacagtgggcatggcctactgcggctccgggaacaacaaggccatc
agacgtctgctgcatgtggctgtaagcgacgtgaacgatgatgtcagaagggcagcggtg
gagtccattggattcatcatgttcaggaccccagagcaatgccccagtgtggtgtctctc
ctgtcagagagctacaacccccatgtgcgctgcggagccgccatggccttgggcatctgc
tgtgccgggacaggcaacaaggaggccatcaacctgctggaacctatgaccaacgaccca
gtgaactacgtgagacagggtgccctcatctcctctgccctcatcatgatccaacagacc
gaggtcacctgtcccaaggtgaaccagttccggcagctctactccaaggtcatcaacgac
aagcacgatgacgtcatggccaagttcggggccatcctggcccagggcatcctggatgca
ggtggccgtaacgtcaccatctccctgcagtccaggacgggccacacccacatgccgtca
gtagtgggcctgttggtgttcacccagttctggttctggttccccctctcccacttcctc
tccctggccttcacccccaccgccattatcggactcaacaaggacctcaagatgcccaag
gtgcagtaccgctccaactgcaagccctccaccttcgcctaccctccggccctggaggta
cccaaggagaaagagaaggagaaggtgtctactgctgtgctctccatcacagccaaagct
aagaagaaggagaaagagaaggagaagaaggagaaagaggaggagaagatggaagtagtg
agtgaggtacaggaggctgagaaggaaaagaaagatgacgagaaagagaaagagaaagag
aaagagaaggagaagaagaaggaacccgagcccaacttccagctgatggagaacccagcc
agagtgatgcccgcccagctcaaagtgctcaacatgcccgagacgtgccgctaccagccc
ttcaaaccgctgcacaccggcggcattatcatcatgaaggacaccagcgaggaagaggag
gagctggtggagcctgtctctgcccacggccccaagatcgaggaggaggaacaggagccc
gaggcccccgagtccttcgagtacgttgatgagtga
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