Salvelinus fontinalis (brook trout): 129867560 Help Entry 129867560         CDS       T11136                                  Name (RefSeq) roquin-1-like isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism sfon  Salvelinus fontinalis (brook trout) Brite KEGG Orthology (KO) [BR:sfon00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:sfon03000]     129867560    04121 Ubiquitin system [BR:sfon04121]     129867560 Transcription factors [BR:sfon03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     129867560 Ubiquitin system [BR:sfon04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     129867560 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-C3HC4_4 zf-RING_2 zf-CCCH zf-C3HC4 zf-C3HC4_2 zf-CCCH_4 zf-CCCH_UNK zf_CCCH_4 Prok-RING_4 Motif Other DBs NCBI-GeneID:  129867560 NCBI-ProteinID:  XP_055797011 LinkDB All DBs Position 12:complement(49216888..49250801) Genome browser AA seq 1083 aa AA seqDB search MPVQAPQWTEFLLCPICTQLFEESLRKPISLGCGHTVCKMCLNKLHRKACPFDQTAIATD IELLPVNTALLQLVGGQVPKRQSTTLVTGAEDIAHYEEASECVEELAQYLKPLSNSRGVG LSTSSAQSSLSRPMQRKLVTLVHCQLVEEEGRVRATRAARSLGERTVTELILQHQNPQQL SSNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASK TSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEDFWTYEALRREHDSQIVQIAMEGGLRIA PDQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLEL LANIDPSPDSPPPTWELLDTGLVAVKTVVHGLVDFIQNHSKKGSDPQQPPQHSKYKTYMC RDMKQKGGCPRGTSCTFAHSQDELEKYRKMNKRLAARRPLSLSLTQLNEVGLLPEEVGML EGLAHKGLTNGMVASVTGSALPQLISRGADPSYEPMMRKPQSQGSLSAPSSPPDLLDPVP NRAMAHPRMAVDHLAMHKQMPRRPSMYPPQQGELFYPPEPRAPPSALQYEASQNAPGNPP YPYQPSQYPPQPRYVRNPPPTNDPALPPYPGTYPQERQCPPQPSSSHFSNANPQGFAPPP HYDGRRHPAYPPPPPHSYPHREDPSMPADEASRERYLPEGYHPSGPHPSHMRPYTPRESY NRPQPTPSLDYLHRRRQEIMAQLEDGKQVTPPPFAPSPTLPHHYESNYTQEQQQYLENSQ AFSKYREPDYASQYSPWSCDTIGSYIGSKEGKSRDSMERMNAEGKGVEGRRKAAEARDDD PIIPFGSLPTVSRFGVISRTPKTGYLTAGPGQAMTLSQGTNGPKHSAATGTGRTRTPFGF CSVRCISQSLTGSCCPPAGWGAAGYSQPPQAHLSERPVKEREQLTMELQQVNQQINKQTA QADHPSPEEWSSGSVSSQQLSLELHHVEREIGKRTRQIALEHLVSHDGSGAYKLKPTENG QRAEHSLVLSEGCNGPSGVLQDGSVSSGGLSCLTSKTSSLSLSADPIAGGTDRKTNGVVH LCS NT seq 3252 nt NT seq  +upstreamnt  +downstreamnt atgcctgtgcaagcgccgcaatggacggaattcctgctgtgtcccatctgcacccagctg ttcgaggagagcctccgcaagcccatcagcctgggctgcggccacaccgtctgcaagatg tgcctgaacaagctgcatcgcaaggcctgccccttcgaccagacggctatcgccaccgac attgagttgctgccagtcaacacagccctgctgcagctggtgggaggacaggtgcccaaa cggcagtctaccaccttggtgacaggggcagaggacatagcccactatgaggaagccagt gagtgtgtggaggagctggctcagtacctgaaacccctgagcaacagcagaggtgtgggg ttgagcaccagcagcgcccagagttctctgagtcggcccatgcagaggaagctggtgacc ctggtgcactgtcagctggtggaggaggagggccgggtgagggccacgcgggcggccagg tctctgggggagcgcaccgtcactgagctcattctgcagcaccagaacccccagcagctc tcctccaacctgtgggctgcagtcagggcaaggggctgccagtttctcggcccagcgatg caggaggaggctctgaagctggtgcttttggctctggaggacggctccgctctatccagg aaggtcctggtgctgtttgtggttcagaggttagagccacgcttcccccaggcctccaag accagcataggccacgtggtgcagctcctctacagggcctcctgcttcaaggtgaccaag cgtgatgaggactcgtccctgatgcagttgaaggaggacttctggacgtacgaggcgctg cggcgcgaacacgactcccagatcgtccagatcgcaatggaggggggcctccgcatcgcc cctgaccagtggtcttccctgctctacggggaccagtcgcacaagtcccacatgcagtcc atcattgacaagttgcagacgccagcgtcgtttgctcagagtgttcaggagctgaccatc gccctgcagaggacaggtgacccggccaacctgaaccgcctgcgaccacacctggagctg ctagccaacatcgacccaagtccagactcccctccccccacgtgggagctgctggacacg ggcttggtggcagtgaagactgtggtacacggcctggtggacttcatccagaaccacagc aagaaggggagtgacccacaacagccaccccagcacagtaaatacaagacgtacatgtgt cgggacatgaagcagaaggggggctgtcctcgaggaaccagctgcaccttcgctcactct caggacgagctagagaagtaccgaaagatgaacaagcgtctggctgcccgccggcccctc agcctatccttgacgcagctgaacgaggttggcctattgcccgaggaggtggggatgctg gaggggctggcacataagggcttgacgaatggcatggtggcgtcggtcacaggctccgcc ctgccccagctcatctcccgcggtgccgacccctcctacgagcccatgatgcggaagccc cagtcccagggaagcctcagtgcccccagctctcctccagacttactggaccctgtgccc aatcgggccatggcccaccccaggatggcagtggaccacctggccatgcacaagcagatg cccaggaggccctccatgtacccccctcagcagggagaactcttctaccctcctgagccc agggcacctccatcagccctgcagtatgaggcctcccagaacgccccaggtaaccccccc tacccctaccagccctctcagtacccaccccagcctcgctacgtccggaacccccctccc accaacgacccggccttgcccccctaccccggcacctacccccaggagcgccagtgtccc cctcagccctcgagttcccacttctccaatgccaacccccaagggtttgcgcctcctccg cattatgacggccgtcgacaccccgcctacccccctccaccaccacactcctatccccac cgggaggacccctccatgcctgcggacgaggcctccagagaaagataccttcctgagggt taccacccttctggcccccaccccagccacatgaggccctacacccccagggagtcttac aaccggccccagcccactcccagtctggactacttgcaccgccgacgccaggagatcatg gcccagctggaagacgggaagcaggtcactcccccacccttcgccccctcgcctactctg ccacaccactacgagtccaactacacacaggagcaacagcagtacttggaaaactcacaa gcgttttcaaagtaccgcgagccagactacgctagccagtactctccttggtcatgtgac actatcggctcctacattggcagcaaggaggggaagtccagagacagtatggagaggatg aacgctgaggggaaaggtgtggaaggcaggcgcaaggctgccgaggccagagatgacgac cctatcatccccttcggctctctgcccaccgtgtcacgcttcggggtgatctcccgcacc cccaagacgggctacttgactgccgggccagggcaggccatgaccctctcacaggggacc aatggccccaaacacagcgctgcaacaggtacagggagaactcgcacaccttttgggttt tgctctgttcgctgcatttcgcagagtctgactggctcttgttgtccccctgcagggtgg ggtgctgccgggtacagccagccccctcaggcccacctcagtgaacggccagtcaaggag agggagcagctgacgatggagctccagcaggtcaatcagcagatcaacaagcagacggcc caggcggaccatcccagcccggaggagtggtcgtcagggagcgtctccagccaacagctg agcctggagctccaccatgtggagagggagatcggcaagaggacccgccagatagccctg gagcaccttgtgagtcatgatgggagtggggcgtataagctgaagcccactgagaacggg cagagagcagagcactcgttggtcctcagtgagggctgtaatggtcccagtggtgtgctg caggacggcagtgtgtccagcggtggtttgtcctgccttaccagcaagacctcgtccctc agcctgtctgcagaccccatcgctgggggcactgaccgaaagaccaacggcgtggtccac ctgtgctcctag

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