Salvelinus fontinalis (brook trout): 129867592
Help
Entry
129867592 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04115
p53 signaling pathway
sfon04120
Ubiquitin mediated proteolysis
sfon04137
Mitophagy - animal
sfon04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129867592
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129867592
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129867592
09143 Cell growth and death
04115 p53 signaling pathway
129867592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129867592
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129867592
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
129867592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
TerY_C
Motif
Other DBs
NCBI-GeneID:
129867592
NCBI-ProteinID:
XP_055797072
LinkDB
All DBs
Position
12:52657905..52675920
Genome browser
AA seq
334 aa
AA seq
DB search
MSGRANVQPMNSWKGVLKLFTCIATRTANNPKEVLTFQEKRKALFGNLMDEEMSRQTATA
LPTGTSKCAPSQRIPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPK
LTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKADHEELCEFRPYSC
PCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFH
FMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIA
TAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagagctaatgtgcagcctatgaactcatggaagggggtgctcaagctcttc
acatgcatagccactagaacagccaacaaccccaaagaggtcctcacatttcaagagaag
aggaaagccttatttgggaatcttatggacgaagaaatgagtcgccagaccgccacagcg
ctgccaacaggaacctccaagtgcgccccctcccagcgcatccccaccctgtccggcact
acagcctctaacagcgacctggccagcctgtttgagtgccctgtctgcttcgactatgtg
ctgccccccatcctgcagtgccagagcggccacctggtctgcagcaactgccggcccaag
ctcacttgctgccccacctgccggggcccactgggctccatccggaacctggccatggag
aaggtggccaactctgtgctgttcccctgcaagtatgcgtcgtcgggatgcgaggtaacg
ctgccccacacagacaaggcggatcacgaggagctgtgtgagttccggccgtactcctgc
ccctgcccaggggcctcctgtaagtggcagggctcgttggacgcggtaatgccccacctc
atgcaccagcacaaatccatcaccacgctgcagggcgaggacatcgtgttcctggctaca
gacattaacctgcctggggcagtggactgggtcatgatgcagtcctgctttggtttccac
ttcatgctggtcctggagaagcaggagaagtacgacggccaccagcagttctttgccatt
gtgcagctaatcggcacgcggaagcaggcagagaactttgcctaccgcctggagctcaac
gggcaccggcgacggctcacctgggaggccacaccccgttccatccacgagggcattgcc
acggccattatgaacagcgactgcctggtgttcgatacctccatcgcgcagctgttcgct
gagaacgggaacctgggcatcaatgtcaccatatccatgtgctga
DBGET
integrated database retrieval system
