Salvelinus fontinalis (brook trout): 129867605
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Entry
129867605 CDS
T11136
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04810
Regulation of actin cytoskeleton
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129867605
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129867605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129867605
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129867605
Factors involved in mRNA localization
Other mRNA localization factors
129867605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
MauJ
Motif
Other DBs
NCBI-GeneID:
129867605
NCBI-ProteinID:
XP_055797085
LinkDB
All DBs
Position
12:complement(54367622..54593059)
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AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSLMYQPNFNTNFEDRNAFVTGIARYI
EQATVHSGMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRLAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGHDELLAD
IVNLCVDYYENRMYLTPNEKHMLLKVMGFGLYLMDGSNSNIYKMDAKKRVNLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKNRWSCTSTGSSPQYNICEQMVQIREDHMRFI
SELARYSNSEVVTGSGRQEAHKTDHEYRKLFDLSLQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTVEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSVLQDFAQLTLRDPLRQAIKKKKNVVQSVLQAIRKTICDWEAGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTIMDMEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRADCKNQGANIPWPASNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSIVELEGLMNINRMTHKLLSKFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKALNLAYSS
IFGFYRHFVGPPHIKAMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCLLSEQSMSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAITREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIISLLGQQRRFDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIHKFQVLNDEIYAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggtaacgctggaggatgctctgtccaatgtggaccttctggaggagctg
cctctcccagaccagcagccctgcatcgagcccctgccctcctccctaatgtaccagccc
aacttcaacaccaactttgaagaccgtaatgcctttgtgacggggatcgccagatatatc
gagcaggccaccgtccactctggtatgaatgagatgctggaggagggccaggagtacgct
gtgatgctgtacacgtggaggagctgctcccgcgccatcccacaggtgaagtgtaatgag
cagcccaacagagtggagatctatgagaagacagtggaggtgctggagcctgaggtcacc
aagctcatgaacttcatgtacttccagcgattggctatagaccggttctgtggggaggtg
cgtcgcctctgccacgctgagaggaggaaggactttgtctccgaggcctacctgctgacc
ttggggaagttcatcaacatgttcgccgtgctcgacgaactcaagaacatgaagtgtagc
gtcaagaacgaccactccgcctacaaacgagctgcccagttcctcaggaagatgtcagaa
ccctcgtccatccaggagtctcagaacctctccatgtttctggccaaccacaacaagatc
actcagtctctgcagcaacagttggaggtgattaacggccatgatgagctgctggctgac
atagtcaacctgtgtgttgattactatgagaacaggatgtacctgacccccaacgagaaa
cacatgctgctcaaggtgatggggtttggtctgtacctaatggatggcagtaacagcaac
atctacaaaatggacgccaagaagagggtcaacctgaccaagattgacaagttcttcaag
caactgcaggtggttcctctgtttggtgacatgcagattgagctgtccaggtacatcaag
accagcgcacactttgaagagaacaagaaccgatggtcgtgtacctcaacaggcagcagt
cctcagtataatatctgtgagcagatggttcagatcagggaagaccacatgaggttcatc
tctgagctggctcgctacagtaacagtgaggtggtgacggggtctggccgtcaggaggcc
cacaagacagaccatgagtacaggaagctgtttgacctgtctctgcaggggatgcagcta
ctgtcccagtggagcgcacacgtcatggaagtgtactcgtggaagctggttcatccaacg
gataagtactctaacaaggagtgtcctgacaacgcggaggagtatgaacgagctacacga
tacaactacaccgtcgaggagaagtttgccctggtcgaggtgatggccatgataaagggg
ttgcaggttctgatgggtcgtatggagtcggtgtttaaccacgcgatccgccacaccatc
tactcagtcctgcaggacttcgcccagctcaccctgagagacccgctacggcaggccatc
aagaagaagaagaacgtggtccagagtgtcctgcaggccatcaggaagaccatctgtgat
tgggaggcaggacgtgagccacacaacgacccggccctgcgaggagagaaggatcccaag
ggagggtttgacatcaaggtcccccgccgcgccgtcggcccctccagcacacagctgtac
atggtccgtaccatgctggagtctctgatagctgataagagtggttctaagaagactctc
cgcagcagtctggagggacccaccatcatggacatggagaagttccacagagagtccttc
ttctacacacacctgctcaacttcagcgagaccctgcagcagtgctgtgacctgtctcag
ctgtggtttagagagttcttcctggagctgaccatgggtcgcaggatccagttccccatc
gagatgtccatgccctggatcctcacagaccacattctggagaccaaggaggcctctatg
atggagtatgtgttgtatcctctggacctctataatgacagcgcccactacgccctgacc
aagttcaagaagcagttcctctacgatgagattgaagcagaggtcaacctgtgttttgat
cagtttgtctacaagctggctgatcagatatttgcctactacaagattctagctggaagt
ctgctgctggacaagcgtctgagagcggactgtaagaaccagggagccaacatcccctgg
cccgcgtccaaccgctacgagaccctgctgaagcaacgccatgtacagctgctgggccgt
tccatagacctgaaccgtctgatcacccagagagtgtctgctgctctgtacaagtctctg
gagctggccatcaaccgcttcgagagcgaggacctcacatccatcgtggaactagaaggt
ctgatgaacatcaaccgtatgacccacaagctgttgtctaagttcctgacgctggacagt
atggacgccatgttccgggaggccaatcacaatgtctccgccccctacggacgcatcaca
ctccacgtcttctgggaactcaactacgatttcctccccaactactgctacaacggatct
actaacaggtttgtccgcacggtcctgcccttctcccaggagttccagagggacaagccg
cccaacgcccagccccagtacctgtacgggtcaaaggctctgaacctggcgtacagcagt
atctttggtttctacagacactttgttggtcctcctcacatcaaggccatgtgtcgtctg
ctggggtaccagggcatcgctgtggtcatggaggagctgctgaaagtggtcaagagcctg
ctccagggcaccatcatgcagtatgtgaagaccctgatggaggtgatgcctaagatttgc
cgtctcccgcgccacgagtacggctcgccgggtatcctggagttcttccaccaccagctg
aaggacatagtggagtacgccgagctgaagaccgtctgcttccagaacctcagggaggtg
ggcaatgctctgctcttctgtctgctcagcgaacagagcatgtctcaggaggaggtgtgt
gacctgctacatgccgcaccattccagaacattcttcccagggtccatgtcaaggagggt
gaacgtcttgatgccaagatgaaacgtctggaggctaaatacacagccctgcacctggtt
cccctgatagaacgcctaggaaccccacagcaaatagccattacccgtgaaggtgacctg
ctgaccaaagagcgtctgtgctgtggcctgtccatgttcgaggtcatcctgacacgcgtc
cgcggtttcctggacgaccccatctggcgcggcccgttgcccagcaacggcgtgatgcac
gtggacgagtgtgtggagttccaccggctgtggagcgccatgcagtttgtttactgtatc
cctgtcggagctcacgagttcaccgtggagcagtgtttcggggacggtctccactgggca
gggtgtatgatcatctccctactgggtcaacagagacgctttgacatcctggacttcagc
tatcacctgctgaaagtgcagaaacacgatggaaaggatgagatcattaagagtgtgcct
cttaaaaagatggtggacagaatccacaagttccaggttctcaacgacgagatctacgcc
attctgaacaagtacctaaagtcaggcgatggggaaaatatgcccgtggaacatgtccgg
tgtttccagcctcctatccaccaatccctggccagcaactga
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