Salvelinus fontinalis (brook trout): 129867609
Help
Entry
129867609 CDS
T11136
Name
(RefSeq) cyclic nucleotide-gated channel cone photoreceptor subunit alpha-like isoform X1
KO
K04950
cyclic nucleotide gated channel alpha 3
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129867609
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129867609
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
RR_TM4-6
CDC45
PFF1_TM
Neur_chan_memb
Ion_trans_2
Zip
NPR3
Motif
Other DBs
NCBI-GeneID:
129867609
NCBI-ProteinID:
XP_055797095
LinkDB
All DBs
Position
12:complement(55094176..55121523)
Genome browser
AA seq
731 aa
AA seq
DB search
MAKICTDQSYPATTRQRPSLCTPNDNLDSIENGTPRSNSECDDTSSEIQGSVSVLTSRQP
ESHRDSFTGSGALARLSHFLFMLRTWASHRMHREVERPNSFLERFRTPELKEVSSRESNA
RSQGYPDRVRKRNKKDDKDEIKKEEKKQEEQEDEKKEEEKEKEEEPKKEEPKKEEPKKEE
PKKEEPKKEEPKKEEKKKEEPPKEIWIMDPSTDKYYTWLTIIAAPCFYNLMMLVTRACFN
ELQNTYTLLWIVLDYSSDVVYYVDTFVRSRTGYLEQGLLVKDKQKLLDKYRQTEQFKWDV
ISMIPTDLLFLKVGINNPELRLNRLAKMNRLFEYFDRTETRTSFPNVFRISNLVLYILII
IHWNACIFFAISKTIGFGSDTWVYPNISHPEHGRLSRKYIYCLYWSTLTLTTIGETPPPV
RDFEYLFVVGDFLIGVLIFATIVGNVGAMISNMNKNRADFQAKIDSIKQYMQFRKVSKDL
EARVIKWFDYLWTEKKTCDEKEVLKNLPDKLKAEIAIDVHLDTLKKVKIFQECEAGLLIE
LVMKLQPQVFSPGDYICKKGDIGREMYIIKEGKLAVVAEDGVTQWCVLSDGAYFGDISIL
GIKGSKAGNRRTANIRSVGYSDLFALSKDDLMEALTEYPEAKKILEEKGKATLMKDNMID
EEIANAGADPKDMEEKILRLESNMEIMTSKLAKIMAEFTSSQGKIKQRITNMESTVKSVR
PEDISEVVADK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatctgcacagaccagtcctacccggcaacgacgcggcaacggccatctctc
tgcacgccaaatgacaatctggactccattgagaacggaacccccaggtccaactcagag
tgtgatgacacctcgtcagagattcagggttcagtgtccgtgttaaccagcagacagcca
gagtctcacagagattccttcacagggtcaggagccctggccaggctctctcacttcctg
ttcatgctgcggacctgggcctctcacaggatgcaccgcgaggtggagagaccgaactcc
ttcctggaacgcttcaggacccctgagctcaaagaggtctccagcagagagagcaacgca
cggtcacagggataccccgacagagtccgcaagaggaacaaaaaagacgacaaggacgaa
ataaagaaagaggagaaaaaacaggaagagcaagaagatgagaagaaagaggaggagaag
gagaaagaggaggagcctaagaaggaagagcctaagaaggaggagcctaagaaggaggag
cctaagaaggaggagcctaagaaggaagagcctaagaaggaggagaagaagaaggaggag
ccaccgaaagagatttggatcatggacccgtcaacagacaaatactacacgtggctcacc
atcattgcagcgccgtgtttctacaacctgatgatgctagtgaccagggcatgttttaac
gaactccagaacacttacacattgctgtggattgtcctggactactcctcagacgtagtc
tactacgtagacacattcgtcaggtctagaacgggttatttggaacaagggctgcttgtg
aaagacaaacaaaagcttctggacaaatacagacaaacggaacagttcaaatgggacgtc
atttcaatgattcctacagacctgctttttctgaaagtgggcatcaacaatcccgagctc
cgactgaaccggctcgcaaagatgaaccgcctctttgagtacttcgaccgcactgaaacc
agaaccagcttccccaacgttttcagaatcagtaacctggtactttacatcctgatcatc
atccactggaacgcctgcatcttcttcgccatctccaagaccatcgggttcgggtccgac
acctgggtgtaccccaacatcagtcaccctgagcacggacgcctttccaggaagtacatc
tactgtctctattggtcgactctgaccctgaccaccatcggagaaaccccgccccccgtc
agggactttgagtacctcttcgtggtcggcgacttcctcatcggcgtgctgattttcgcc
accattgtcggtaatgttggcgccatgatctccaacatgaacaaaaaccgtgcggacttc
caggctaagatcgactccatcaagcaatacatgcagttccgtaaggtctccaaggatctg
gaggccagggtcattaagtggttcgactacctctggacggagaagaagacctgcgatgag
aaggaggtgctgaagaacttgccggacaagctgaaggccgagatcgccatcgacgtccat
ctggataccctgaagaaagtgaaaatcttccaggaatgcgaggctgggctgcttattgag
ttggtgatgaagctgcagcctcaggtgttctccccaggagattacatctgtaagaaggga
gacatcggcagagagatgtacatcatcaaggaggggaagctagctgtggttgcggaagac
ggggtcacacagtggtgtgtgctcagcgacggagcgtacttcggagatatcagtatccta
ggcatcaagggttccaaggctggcaacaggagaacggccaacatcaggagcgtgggttac
tctgacctctttgccctgtcgaaagacgaccttatggaggctctcaccgagtatcccgaa
gccaagaagatcctggaagagaagggaaaggctacgttgatgaaggacaacatgatcgat
gaggaaatcgctaacgcaggtgccgaccccaaggacatggaggagaagatcctcaggctg
gagagtaatatggaaatcatgacgtccaagttggccaagatcatggctgagttcacatcc
agccagggcaagatcaaacagaggatcaccaacatggagtcaacagtcaagtcggtccgg
cccgaggatatatctgaggtggtggccgacaagtag
DBGET
integrated database retrieval system
