Salvelinus fontinalis (brook trout): 129867686
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Entry
129867686 CDS
T11136
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04510
Focal adhesion
sfon04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129867686 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129867686 (lamb4)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
LAMB1
EGF_LMN_ATRN
LAMB4
Motif
Other DBs
NCBI-GeneID:
129867686
NCBI-ProteinID:
XP_055797224
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All DBs
Position
12:complement(9140993..9167768)
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AA seq
1785 aa
AA seq
DB search
MAIWEVLVPGALLQEDCDVNSCHPQLGDLMVGRAAQLSASSTCGRNGPQNYCILGYLEDG
QKCFKCDSRQPYNLYNNQNSHQIENVITTFGPERKMKWWQSENGAHQVSIRLDLETLFQF
SHLVLTFKSFRPAAMLVERSKDYGYSWKVFRYFAEDCASHFPGVSQGPAGSTDDVVCDSR
YSASEPSTDGEVVLKALDPSFDIENPYAPHIQEQITLTNLRVNFTHLFTLGDTLLGRKKR
NPQEKYYYALYEMVVRGSCFCNGHASMCMPVDGTRGDVLNEPGMIHGRCVCQHNTVGTNC
ERCQDFYNDVPWKPAGQTDPHVCRRCNCHGHSETCHFDIDQYQASGRVSGGVCDGCRHDR
MGPQCERCRPYLYQDPQLSMEDPRGCIPCDCDLTGSLDNGLCDPVSGRCMCKENVAGDRC
DRCKFGFYGFSQEDPTGCQRCRCNFLGSVLTPYPCDQVTGQCVCQRLAMGPLCDQCLPGY
WGLGNTVHTCSPCDCDHGGAYSSTCSSLDGQCQCLPNMVGRSCGDPAPGHFLAALDYYLY
EAENAAPLEGKNSSSLVKPTDLPECEEYYRQQGYDIKYQNGRLVLTRRSKRQARRRRQGQ
RSIPLDPGSALQIVPRERTPDVPITWTGPGFVRVLDGAGLRFTVDNLPASLDYHLVIRYE
PESPDDWMASVNIVPLLAGDGGCPTNPKGEKTLNIPGAARVAILDTPVCLNTGSRYYVDI
TFRKQPNSNPQSSSHTLIDSMGLIPKMESVQDFCSQSELDSFRRFRCFELAAEQETLPDV
CYGLIGSLSARIHNGAMLCRCNIQGSHGPYCSKFGGLCECKANVVGRCCDSCAPLNFGFG
SNGCAPCECDPRGAVAELCDQVRGQCPCRMEVGGRRCDRCLSGYYGFPLCRPCKCNGLAE
LCDQDTGACLDCREHSTGYNCESCVEGYLGDPVSREPCKPCLCPDTQSSGRFFASTCNKD
PESGSLTCDCLAGHTGLRCDACSAGFYGGLTVPGSGCDECLCNNNIDPADSDACDSVTGE
CLRCLHNTQGPRCQSCKPGYYGDALAQDCKECSCDRQGTDVTQCPLGSPCFCDPLTGQCP
CRVGAVGTLCDECATGFWNIQGEYGCQPCKCDPANSFNNHCDKVTGHCQCRTEFGGRQCD
ECGENHFGNPDLQCVSCDCNMEGTARPACNPLTGECLCRVGVMGIFCDECAPGYDQVFPA
CFPCHPCAVLWADNVTDVHRAAQRMRTFIPDHGGQLEPGHSRQLQRMLEMHSKLDYLGNL
TGRSLPRVKDVEKLCVRISKLKDSIDPNAIIVDSSSLLNTEIDNIHHEFKMLLDNLRNKI
GEAPTLDLKEMQEALGKIRKQHADFMADEKKVKEAERALENSMDTRQEIKDHLSSCSILG
DMEGLEKKVKALSVAKLNKNICGGPGDEECSKSDCGGALCRDFLGQRECGGPTCKGSFPV
SHNATKTAEQVENDLIDLLQKLKDSKIKINEAKQMTQGTQEQAEDLQKKITDSKEMFKRE
KNDTKDLINRVKDYLTDEMVAPEDIENLVKAVLAIQLPGSPGDIRSMIQNIRGVLTNFIE
FKVDLEKLKDQAKTAQDLLEKAQDIRDRTKGIDVTDLKKTMTDTENTQDKVEQDLEKAKE
SNGMADKMIKEIEKKLNNIETNLNSTRTPEMLEEIEVLKSKTEMNREQAGQAKADADAAI
GAATDAEKGLDKVTTLFGRLKTGNTNQNNNEVANERLKNITMEAEKVAKDVQDKIQQIDD
LEKKIQDFIRNKEDKAKEVAMLLEMVEALQKEIAARVDGYINCTS
NT seq
5358 nt
NT seq
+upstream
nt +downstream
nt
atggctatttgggaagtgctggtgcctggggccctcctccaagaagactgtgatgtcaac
tcttgccacccccagctgggggacctgatggtgggccgcgctgcccagctctcagcctcc
tccacctgtggacggaacgggccccagaactactgcatcctcggatacctggaggatggg
cagaagtgtttcaaatgtgactccaggcagccctacaacctctacaacaaccaaaacagc
caccagattgagaatgtcatcaccacctttggccctgagcgcaagatgaagtggtggcag
tctgagaacggggctcatcaagtcagtatccggctggatctggagactcttttccagttc
agtcatctcgtcctcactttcaagagtttccgtcctgccgccatgctggtggagaggtcc
aaagactacgggtacagttggaaggtgttccgctactttgccgaggactgtgcctcccac
ttccctggggtctcacaagggccggctggcagcaccgatgacgtcgtctgtgacagcaga
tactccgcctcagagccgtctactgacggagaggtggtgttgaaggctctagatccaagc
tttgacatagagaacccatatgctcctcatattcaagagcagatcaccttgaccaacctg
cgggtcaacttcacccatctgttcaccctgggtgacaccctactggggcggaagaagagg
aaccctcaggagaagtactactatgccctgtacgaaatggtggtgcgcggcagctgcttc
tgcaatggccatgccagcatgtgcatgccggtggatggcacccggggtgacgttttaaat
gagcctggcatgattcacgggcgctgtgtatgccaacataacactgtgggcacaaactgt
gagagatgccaggacttttacaacgatgtcccctggaagccggccggccaaactgaccca
catgtctgcagaaggtgtaactgtcacggtcattcggagacgtgtcacttcgacatagac
cagtaccaggccagtgggagggtcagtgggggggtgtgtgacggctgccgacacgaccgc
atgggtccccagtgtgaacgctgccgaccctatctctatcaggacccccagctctccatg
gaagaccctcggggctgtatcccgtgtgactgtgacctgacggggtccctggataatggc
ctgtgtgaccctgtgtcgggccgctgcatgtgtaaggagaacgtggcgggggacaggtgt
gatcgctgtaaatttggcttctacgggttcagccaggaggaccccactggctgccagagg
tgcaggtgtaacttcctgggtagtgtcctgaccccctacccatgtgaccaggtgacaggc
cagtgtgtatgtcaacgcctcgccatgggacccctgtgtgaccaatgtctgccaggctac
tggggtctggggaacactgtacacacctgctcaccttgtgactgtgaccatggaggagcc
tacagcagcacgtgctcttcattggacggccagtgtcagtgcctgccaaacatggtgggt
cggagctgtggggatcctgcccctggacatttcctggctgctctagactactacctgtac
gaggcagagaacgctgccccactggagggaaaaaactcctcctctctggtgaaacccaca
gacctgcctgagtgtgaggaatactacagacagcagggctatgacatcaaatatcaaaat
ggccgcttggtcctgaccaggagaagcaaaagacaagccaggaggagaagacagggacag
aggtccattcccctggacccgggctcagcactccagattgtgccccgggagaggacacca
gatgtaccaatcacttggaccggtccaggattcgtgcgggtcctggatggtgctgggctt
aggttcactgtggacaacctcccagcgtccctcgactaccatctagtcatccgctatgaa
ccagagtcgccagatgactggatggcctctgtgaatattgttccattattggctggtgac
ggaggttgtcccactaacccgaaaggggagaaaaccctcaacatacctggggctgccagg
gttgccattttggatacacctgtgtgtctgaacacgggaagtagatattatgtggacatc
acttttaggaagcagcccaactctaaccctcagtccagctcacataccctcatcgactca
atgggtctgatccctaagatggagtctgtgcaggacttctgttcgcagagtgagctggac
tcgttcagaagattccgctgttttgagttggctgctgagcaggagaccctgcctgatgtg
tgttatggcctcattggaagcctgtcggctcgcatacacaacggtgccatgctttgcagg
tgtaacatccagggttctcatggcccatactgcagtaaattcggagggctctgtgaatgc
aaggccaacgtggttggccgctgctgtgactcctgcgcccctctgaacttcggcttcgga
tccaacggctgtgcaccctgtgagtgtgaccctcgcggtgcagtggcggagctgtgtgac
caggtcagaggtcagtgtccgtgtcgtatggaggtgggcgggcgacgctgtgatcgttgc
ctgtcagggtactacggcttcccactgtgtcggccctgtaagtgcaacggcctggctgaa
ctgtgtgaccaggacactggagcctgtctggactgcagggaacactccaccggatacaat
tgtgagagctgtgtggagggttacttgggtgacccagtctccagggagccctgtaagcct
tgtctgtgccctgacactcagtccagtggacggttctttgccagcacctgcaacaaggac
ccagagtctggtagcctgacttgtgactgtctggctggacacacaggtctccgctgcgat
gcctgctccgctggtttctacggcggcctgaccgtgccgggcagcggctgcgacgagtgt
ctctgtaacaacaacatcgaccctgctgacagtgacgcgtgtgacagtgtgacgggcgag
tgtttgcgttgcctccacaacacccagggaccccgctgtcagagctgtaagcctggctac
tatggagatgcactggctcaggactgcaaagagtgctcctgtgaccggcaggggacggat
gtgacccagtgccctctgggcagcccgtgtttctgtgacccgctgaccggtcagtgcccg
tgtcgggtgggcgcggtgggaacgctgtgtgacgagtgtgccaccggcttctggaacatt
cagggagagtacgggtgccaaccgtgcaaatgtgaccctgctaactccttcaataaccac
tgtgacaaggtgactggtcattgccagtgtcgtactgagtttggaggaagacagtgtgat
gagtgtggggaaaatcactttgggaaccctgacctgcagtgtgtttcctgcgattgtaac
atggagggtaccgcccgccccgcctgcaacccattgacgggtgagtgtctgtgccgcgtt
ggtgtgatgggtatcttctgtgatgagtgtgcccctgggtatgaccaagtcttccccgcc
tgcttcccgtgccacccctgtgctgtcctgtgggcggacaacgtcaccgacgtccaccgt
gccgcccagaggatgcgcaccttcatccctgaccacggcggacagctggagcctggacac
agtcgtcagttgcaacgaatgctggagatgcactccaagctggactatctggggaacctg
acagggagatctctacctcgggtgaaagacgtggagaagctgtgtgtcagaatctcgaaa
ctcaaagactccatagaccccaacgccatcatcgtggactcatcatctcttctgaacact
gagatcgacaacatccaccacgagttcaagatgctgttggataacttaaggaacaaaatc
ggcgaggctccaacactagatctaaaggaaatgcaggaggccctgggtaagatccggaag
cagcatgcagacttcatggctgatgagaagaaggtgaaggaggccgagagggccctggag
aactccatggacacacggcaggaaatcaaagaccatctttccagctgcagcatcttggga
gacatggaggggctggagaagaaggtcaaggctctgagtgtggccaaactcaacaaaaat
atctgtggaggcccaggtgatgaggaatgctccaaatcagattgtgggggtgcgctgtgt
cgagacttcctgggacagagagaatgtgggggtcctacgtgcaagggcagcttccctgtg
agccacaacgccacaaaaacagctgagcaagtagagaatgaccttatcgacctgctccaa
aaactaaaggactccaagatcaagatcaatgaggccaaacagatgacccaaggcacccag
gagcaggcagaggatctacagaagaagatcactgacagcaaggagatgtttaagagggag
aagaatgacaccaaggacctcatcaatagggtcaaagactacctcacagatgagatggtg
gcaccagaggacatagagaatttggtcaaggctgttctggccatccagctgccgggatct
ccgggcgacatccgctccatgatccagaacatccggggcgtgctgaccaacttcattgag
ttcaaggtggatctggaaaagctaaaggaccaagccaagacagcccaggacctgctggag
aaagctcaggatatcagggacagaaccaagggtattgatgttacggatctcaagaaaacc
atgacggacactgagaatacacaggacaaggtcgagcaagacttggagaaggctaaggaa
agcaatggcatggcggacaagatgattaaagagattgagaagaaactgaacaacatagag
actaacttgaactctactagaactccagagatgctggaggagattgaggttctgaagagc
aagacagagatgaacagagagcaggcggggcaggccaaagctgatgcagatgcagccata
ggtgccgctactgacgcagagaaggggcttgacaaggtgactacgctgtttggtaggcta
aagacgggaaacacaaaccagaacaataatgaagtggccaacgaacgcctgaagaacatt
actatggaggcagagaaagtcgcaaaagatgtccaagataaaattcaacaaattgacgac
ttggagaaaaagatccaagacttcatcagaaacaaagaggacaaggccaaggaggttgcc
atgttgctggagatggtagaagccctccaaaaggagattgctgcgcgtgtggatggttac
attaactgtacctcctaa
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