Salvelinus fontinalis (brook trout): 129868045
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Entry
129868045 CDS
T11136
Name
(RefSeq) roundabout homolog 3-like isoform X1
KO
K06755
roundabout, axon guidance receptor 3
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129868045
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
ROBO family
129868045
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
fn3_4
Izumo-Ig
CBX7_C
Motif
Other DBs
NCBI-GeneID:
129868045
NCBI-ProteinID:
XP_055797599
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All DBs
Position
13:9425855..9718956
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AA seq
1432 aa
AA seq
DB search
MLRYLIKTLLQMNLFTDTLRDPSNSSELLFNLSSIPSFNTSLLLDWGNFTASINGSRPRL
EDAPPRIVEHPSDLIVSKGEPATLNCKAEGRPSPMVEWYKDGERVETDREDPRSHRMLLP
SGSLFFLRIVHGRRSKPDEGVYVCVARNYLGEAVSRNASLEVAILRDDFRQTPSDVVVAA
GEPAVMECIPPRGHPEPTISWKRNNMKVNDHDERITIRGGKLMISNTRKSDAGMFVCVGT
NMVGERDSDPAELVVFERPMFVKRPVNQVVLADDTVDFLCEAHGDPAPTIRWRREEGDLP
RGRSDIRSDHSLRLTQVRAEDEGTYTCVSENSVGKAEASGSLQVHVPPQIVVRPRDQITA
QGRTVNFLCGTKGNPPPAVFWQKEGSQILLFPIQETAQSGRFSVSLSGELTITDVHSEDS
GYYICQAISVAGSILTKALLEVESASSDRVPPIIRQGPTNQTLAPGSMAHLQCHVMGNPL
PSIQWEKDGQRILGDERVSLMENGMFQIINLQETDSGAYTCVASSSSGETMWSGVLTVKE
SGGSSVPQASEPFQLPGPPQKPVVTDVTRNSVTLTWQPNAHEGGAAVTSYIIEAFSQSAG
STWQTVADLVKLEKHTVSGLFPNTIYLFIVRAVNAYGLSDPSPISEPVRTQDVSPTGQGV
DHRQVQRELGEVGVHLQEPVTLTASSVQVSWTVDRQSQYIQGYRLLYRPSGGTWQLQDIK
APSERLAVVADLLTGTEYEIKIRPYFDEFQGKDSRLLLIRTAAEVPSAPPRAVTVVTVKL
SNSSSISVSWEPPPADIKNGIIQEYKVWCVGNDTQTRNHINTTVDGTVLSTVLKGLLPGI
LYQVEVAAVTSARVGIHSQPVSVLIKLPVEAPSVPGTGGGVEGDESSVSLAEQITDVVKQ
PAFIAGIGGACWVILMGFSVWIYCRRKKRKELSHYTASFNYTPAVGFPHGEASGLNGRPG
MLGGNMGNYPWLADSWPTTNLVHSGKEAVNCCASKHDTAERYYNEAGISNYLNQTEKYST
GSSNEGPIYSTIDPNAEDLRSFNSPYSSTTPYASTPIMPFTNQALHGSHSPTEQDGGHWI
TQPAGPSSQYAQPERCRTDCGKPKQKSMGKAVKTPSLKWTEALPPPPSSGELEQCVVEAM
PMDDREDMELGSDEEEWCPPLPERTYLIEGCEVGPAPPLRGDASSPATSFSHQSTATLTP
SPREESRHPPHNTARLHHLDGQQLACRLPCGPVSVPRAPSPPLTQSNPNLSAQQHGEGSE
VGTPLRIGLAHRRDLSQGAALSADNVSSTTPVRAQPSPADNTHAPPGLKSRVKKKTSNSG
AYRREVLNQGDLPPPPEPPPENGAVRCPARAVDCGQASLDREGERSTPYRKGSGQRRQDD
EDLIPYSKPSYLAGRGCQMSSNCSTTGSSSSRGSTGSRGGPGSGRKHNEEMR
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgttacctgatcaagaccctgctccagatgaacctattcacagacaccctgaga
gacccgtctaacagcagtgagctgctcttcaacctctcctccatcccctcgttcaacacc
tccctgctgctggactggggcaacttcaccgccagcatcaatggatcccgtcccaggttg
gaggatgcccccccgcggattgtggagcacccctctgacctgatcgtgtccaagggtgaa
ccagccaccctcaactgcaaggccgaggggcgtcccagccccatggtggagtggtacaaa
gatggcgaacgagtggagacagacagggaagacccgcgctcccaccgtatgctgctgccc
agcggctccctcttctttctgcgtatcgtccacggtcgacggagcaagcctgacgagggg
gtctatgtgtgcgtggcacgcaactacctaggcgaggccgtcagtcgcaatgcatcgctg
gaggtggcaatcctgagggatgacttcaggcagacgcccagtgacgttgtggtggcggcg
ggggagccagcagtcatggagtgcatccccccgcggggccacccggagcccaccatctcc
tggaagaggaacaacatgaaagtcaacgaccacgacgagaggatcactattcgaggaggc
aagctgatgatttcgaacacaaggaagagcgacgcaggcatgtttgtgtgtgtgggcacc
aatatggtgggggaaagggacagcgacccagcagaactagtggtgtttgagcgaccaatg
tttgttaagcgtcctgtgaaccaggtggtgttggctgatgacacagtggacttcctgtgt
gaggcccacggagaccccgcccccaccatccgctggaggagagaggaaggagatctgccc
cgtggcaggtcagatatccgcagtgaccacagcctgcgtctaacccaggtccgggctgag
gacgagggcacctacacctgtgtgtctgagaatagcgtgggcaaggcagaagcatcaggc
agcctgcaggttcatgtgccccctcagattgtggttcggccccgggaccagatcacagcc
cagggtcgcactgtaaacttcctctgtggaaccaagggcaaccctccacctgccgtgttc
tggcagaaagaaggcagccagatcctgctgttccccatccaggaaactgcccagtcaggc
cggttctctgtgtctctgagcggggagctgaccatcacagacgtccacagtgaggactcg
ggatactacatctgtcaggctatctctgtagctgggagcattctcaccaaggccctgctg
gaggtcgagagtgcatcctccgaccgagtcccacccatcatccgccaaggaccgaccaat
caaacgctggcgccgggctccatggcccatttacagtgccacgtgatgggcaaccctctg
cccagcattcaatgggagaaggacggccagaggatcctgggagacgagcgtgtcagcctg
atggagaacggaatgttccagatcataaacctgcaggaaaccgactcgggggcctacacc
tgcgtggcttccagctcgagcggagaaacgatgtggagcggtgtactcactgtgaaagag
agtggaggttcatctgtgccccaggcatcagaacccttccagctaccgggacctccccag
aagcctgtggtgaccgacgtgacccgcaacagtgtcaccctcacctggcagcccaacgcc
cacgaggggggggctgccgtcacctcctacatcatcgaggccttcagccaatcagcaggc
agtacgtggcaaacggtggctgacctggtaaagttggagaaacacactgtcagcggtctc
tttcccaacaccatctacctgttcatcgtccgagcggtcaacgcctacgggctgagtgac
cccagccccatctctgagcccgtccgcacacaagatgtgagtcctacaggtcagggagtg
gaccacaggcaggtccagagagagttgggagaggtgggtgttcatcttcaggagcctgtc
acactcactgcctccagtgttcaagtatcatggacggtagaccgtcagtcccagtacatc
cagggctaccggctcctctaccggcccagcggtggcacctggcagctgcaggatatcaag
gccccgtcagagcgcctggccgtggtcgccgacctgctcacaggcacagagtatgagatc
aagatccggccctacttcgacgagttccagggcaaggacagtcggctgctgctgatcaga
acagcagcggaagtcccaagcgcccctcccagagcagtcaccgtggttacagtgaagctg
agcaacagctccagtattagtgtgtcctgggagcctcctcccgccgacattaagaatgga
ataatccaggagtacaaggtgtggtgtgtgggcaatgacacccagacccgcaaccacatc
aacaccaccgtggatggcactgtcctctccaccgtactcaaggggctgctgccaggcatc
ctgtaccaggtggaggtggcagcggtgaccagcgccagagtgggcatccacagccagcct
gtgtccgtcctcatcaagctgccagtggaggcaccgtcagtgcccggtaccgggggaggc
gtggagggtgatgagagcagcgtgagcctggccgagcagattactgacgtggtgaagcag
ccggcgttcatcgctgggatcggcggggcctgctgggtcatcctcatgggtttcagcgtg
tggatctactgccgccgcaagaagaggaaggagcttagtcactatactgcatcgttcaac
tacacgcctgctgttggctttccacatggagaggcatctggacttaatggaaggcctggc
atgctgggtggcaacatgggcaactacccatggctggcagactcttggcccaccaccaac
ctggtccacagtggcaaggaggctgtcaactgctgcgcctccaaacatgacacggcagag
agatactacaatgaagcgggcatctctaactacttgaaccagacagagaagtacagcacg
ggcagctccaacgaaggtcctatctacagcaccatcgaccccaacgccgaggacctgcgt
agcttcaacagcccctactcctccaccacgccctacgccagcactcccatcatgcccttc
accaaccaggcactccatggctctcacagccccacagagcaagatggcggtcactggatc
acccagcccgccggaccctcttcccagtacgcccagcccgagcgctgcaggacggactgc
ggtaaacccaagcagaagtccatggggaaggcggtgaagaccccttctctaaaatggaca
gaagccctccccccacccccctcatctggggagctggagcagtgtgtggtagaggctatg
cccatggatgaccgtgaggacatggagctagggtctgatgaggaagagtggtgcccgccc
cttccggaaagaacctatctgatcgagggctgtgaggtaggtcccgcccctcccctcagg
ggtgacgcctcgtcccccgccacctcctttagtcaccagtccaccgccaccctcacaccg
tcgcccagagaggagagccgccatccaccccacaacacagcacgccttcaccaccttgat
ggacagcagctagcatgtaggttaccttgcggtcccgtctcagtgccccgggcgcccagc
ccacccctcacccagtccaaccccaacctctcagcccagcaacacggtgagggctccgag
gtgggcacaccgctccgcattggcttggcccaccgccgtgacctcagccagggggcagca
ctgagtgccgacaatgtcagctccaccacacctgtaagagctcagccctccccagctgac
aacacacacgctccccccggcctgaagtctcgagtgaaaaagaagacttccaacagcgga
gcttacagaagagaggtgcttaatcaaggagacctccctcctccaccagagccacctcca
gagaatggagcagtgcggtgcccagcaagggctgtagactgtggccaagcatccctggac
agagagggagaaaggagcaccccctacaggaagggatcaggacagagacgccaagatgat
gaggacctgatcccgtacagcaagcccagctacctggcggggcgggggtgtcagatgtcc
agtaactgctccactacaggaagctcctcgtcgcggggctccacggggtcacgagggggt
cccggctcaggcaggaaacacaacgaggaaatgagataa
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