Salvelinus fontinalis (brook trout): 129868057
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Entry
129868057 CDS
T11136
Name
(RefSeq) cytotoxic and regulatory T-cell molecule-like
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129868057
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129868057
04090 CD molecules [BR:
sfon04090
]
129868057
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
Nectin family
129868057
CD molecules [BR:
sfon04090
]
Proteins
129868057
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
V-set
C2-set_2
Ig_2
C2-set_3
Lep_receptor_Ig
TMEM154
LapA_dom
Orf78
CrgA
DUF6476
V-set_CD47
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
129868057
NCBI-ProteinID:
XP_055797617
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Position
13:complement(11068200..11083263)
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AA seq
451 aa
AA seq
DB search
MPLKLQLCFLVLFVRGSVAVQHMTVMEGETLTIKCRIRNAHRSHVEWKNPNGHVMFFNDH
KALRDKRYKIINLSESDFSVSVSDVTFKDGGLYTCLHYTKVPVVKSVTVTVLGMPKLEIT
EHNGKTTIKCSAVGNSHPPKISWLLGSGLEIDAQPQSQYLLEKNTYSSLDILHVQSHKRR
VTVKCIVRHPALHNSSLMNFVKIGQNPSEESHSTSRTSHWPSTEGPKTVSRWPGTQVSTE
KPTATALDWPNIKRSPASTPDSQLSPHSQPAHSVFEATGYTLANDSSSNSTSTTDWSSVS
QTIENTPHNGTRTNSTNARGIFDETERQRGNGSSAPLLIFLVTCLILGLLVVVVFFVIKL
RRAHILWKKENEDSDQSVESSRSKSSNEEKQSRRRGNGLFNIGFTKYVVEEPMATETTTT
TNTKTEQAPEIQIIPQTDGATLSPQIKETEL
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgccactaaagctgcagctttgcttcctagtcttgtttgtaaggggatccgttgcagtg
caacatatgaccgtgatggagggtgagactctaaccattaagtgtcgcattagaaatgcc
cacaggagccacgtggaatggaagaatcctaacgggcatgtgatgtttttcaatgaccat
aaggccctgagggataagcgctacaagataatcaacttgtccgagtccgatttttcagtc
agtgtgtctgatgtcaccttcaaagatggaggcctctacacatgtttacattacacaaaa
gtgcctgtagtgaagtcagttaccgtgacagttttgggtatgccaaaattggagataaca
gaacacaatggaaagactaccatcaaatgttctgcagtgggaaatagccatcctcccaaa
atttcatggcttttggggagtgggttagaaattgatgctcagcctcagtcccagtatctt
ttggaaaaaaacacatattcctccctggatatcttgcatgttcagtcccacaagaggaga
gtcacagtgaaatgcatcgttcgccatccagccttacacaattcttctctgatgaatttc
gtaaaaattggacagaatccctctgaggaatcacactccacttcaagaacctctcattgg
ccaagtacagaaggtccaaaaacagtctcccgttggcctggcacacaggtgtcaacagaa
aaaccaacagctacagccttagattggcccaatataaagcgttcaccagcatcaacccct
gactcacaactcagccctcacagtcagccagcccactcagtgtttgaagctacagggtac
acacttgctaatgacagcagcagcaactcaaccagtactaccgattggtcgtcagtgtcc
cagacaatagagaacacacctcataatggcacaagaaccaactccactaatgctagagga
atcttcgatgagacggagaggcagagaggaaatggaagcagtgcgccgttgctcatcttc
ctcgtgacgtgcctcatccttggtctgctggtggtcgttgtgttctttgtaatcaagctg
aggagggctcacatactctggaagaaagaaaatgaagactctgatcaatctgtggagagc
agcagatcaaaatcaagcaatgaagagaaacaatccagaagaaggggaaatggacttttt
aacattggattcacaaagtatgtcgttgaggaaccaatggcaacagagacgacaacaaca
acaaacaccaaaacagaacaggctcctgaaattcaaatcatcccacaaacagatggagca
accctaagccctcagatcaaggagacagaactgtaa
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