Salvelinus fontinalis (brook trout): 129868072
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Entry
129868072 CDS
T11136
Name
(RefSeq) serine/arginine-rich splicing factor 7-like isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03040
Spliceosome
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129868072
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129868072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129868072
Spliceosome [BR:
sfon03041
]
Common components
Common spliceosomal components
SR proteins
129868072
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
129868072
NCBI-ProteinID:
XP_055797645
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All DBs
Position
13:complement(11453633..11470253)
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AA seq
274 aa
AA seq
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MSYSSSRSSSRNTDCKVYVGDLGNGAAKGELERAFSYYGPLRSVWVARNPPGFAFVEYED
PRDAEDATKGMDGKVLCGARIRVELSTGMSRKSRHDRPSRRHFDPNDRCYQCGENGHYAY
DCYRFSKRGGGRRSRSRSRSRSRGRRYRSRSRSNGRDRRCYKSPSYSKRKSSRSGSPARS
KSRSPVRRSSRSPVRRSSRSPVRRSSRSPVRRSSRSPVRRAASRSRSRSRSVSRPRARSV
SRSRSRSKSRSATTKRDSRSRSPSQRKSPTPDAD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtcctactcgtcatcacgaagctcctcgcgtaacactgactgcaaggtgtatgtaggt
gacctaggcaacggtgctgccaagggggagttggagcgggcgttcagctactatggacct
ttgcgcagtgtctgggtggccagaaacccacctggttttgcctttgtcgagtacgaagat
cccagagatgctgaggatgcgacgaagggcatggacggcaaagtgctctgtggtgcccgc
ataagagtggagttgtcaacgggtatgtctcgcaagtcacgccacgaccgccccagccgc
cggcacttcgaccccaacgaccgctgctaccaatgtggcgagaatggccattatgcatat
gactgctatcgctttagcaagagggggggtggccgccgcagcaggtcccgctcacggtca
aggtccagaggaaggcgttaccgctcacgcagccgaagcaacggccgcgaccgcaggtgt
tataaatccccatcatactcaaagcgcaaaagcagtagatctgggtccccagcacgttcc
aagtccagaagtccagtgcgcaggtcgtccagaagtccagtgcgcaggtcgtccagaagt
ccagtgcgcaggtcgtccagaagtccagtgcgcaggtcgtccagaagtccagtgcgcaga
gcagcaagtcgctccagatctcgatcccggtccgtgtcccgccccagggcgcgcagcgtc
tccagatctcgctcccggtccaagtcccgctcagccaccaccaagagggacagtcgatcc
aggtctccgagccagaggaaaagccccactcccgatgccgactga
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