Salvelinus fontinalis (brook trout): 129868088
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Entry
129868088 CDS
T11136
Name
(RefSeq) RNA-binding protein Nova-1-like isoform X1
KO
K14944
RNA-binding protein Nova
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129868088
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129868088
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Ortholog
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GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_NusA_2nd
DUF1233
Motif
Other DBs
NCBI-GeneID:
129868088
NCBI-ProteinID:
XP_055797692
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All DBs
Position
13:complement(11842998..11868422)
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AA seq
548 aa
AA seq
DB search
MRCVSCHFGGLKEEIGDILSQEGKLGSFCENSHTCNVVRALWNNANRPIQTGQKMMAGGA
VEQNGIFLNPLHHNQHPHMESDPPDSRKRPLTPTEEDCCTKRTNTGEEGEYFLKVLIPSY
AAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHSFIAEK
VREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGA
WVQLSQKPEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCLNISYSNISGPVA
NSNPTGSPYANSAEVLPNAAAAAATASSLLGQAGLAGMGGFPGTMSSFSGNDLLAITSAL
NTLASYGYNTNTLGLGLNPAAASGVLAAVAASANPAAAAAANLLASYASDASGSGHPAVG
LGGFSLGSLAAAAGASNGYLNASSPLMASSLLAAEKLGEGAKDVVEIAVPENLVGAILGK
GGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRITYEQGVR
ATNPQKVG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgtgtttcctgtcattttggtggtctcaaagaggaaatcggagacattttaagt
caagaaggaaaacttggatcattttgtgagaactcgcatacatgtaatgtggtgagggcg
ttgtggaataacgcaaataggcctatacaaactggtcagaaaatgatggccggtggagca
gttgaacaaaacgggatattcttgaatcctcttcatcacaatcaacatccccacatggag
tcagatccccccgactctcgtaaacgaccactaactccgacggaggaggactgttgtacc
aagcgcacaaacacgggagaggagggtgagtacttcctgaaggtgctgatccccagctat
gcggccggctctataattggcaagggtggccagaccatcgtacagctgcagaaagagacg
ggcgccaccatcaagctgtccaaatccaaagacttctacccaggaaccacagagcgggtg
tgtctgatacagggtacggtcgaggcgctaaatggcgtccacagcttcatcgcggagaaa
gtccgcgagatgccccagagcgcccagaaaacagagcctgtcagcatactgcaaccacag
accactgtcaaccccgatcgcgtcaaacaggctaagttaatagtgcccaacagcacggct
ggtctgatcatcggtaagggcggggccacagtcaaggcggtgatggagcagtcgggtgcc
tgggtccagctgtcccagaagcccgaaggcatcaacctgcaggagcgcgtggtcacgatc
agcggggagcccgagcagaaccgcaaagctgtggagatcattgtccagaagatccaggag
gaccctcagagcagcagctgcctcaacatcagctactccaacatttcgggccccgtggcc
aactccaaccccaccggttccccctacgccaactcggctgaggtccttcccaacgccgct
gcggctgccgccactgcctccagccttctaggccaggccggcctggcaggaatgggcggc
ttcccgggaaccatgtccagcttctctggcaatgacctgctggccatcacctcggccctc
aacacactggccagctatggctacaacaccaacaccctgggactgggcctcaaccccgcc
gctgcctccggggtcctggccgccgtggctgctagtgctaacccagctgctgctgccgcc
gctaacctcctggcctcctatgccagcgatgcctccggctccggccatcctgctgttggc
ctggggggcttctccctgggctcgctggccgctgccgcgggggcctccaacggctacctg
aatgcctcgtccccactgatggcttcctccctgctggccgcagagaagctgggagaaggg
gccaaggacgtggtggagattgctgtgcccgagaatctggtgggcgccatcctggggaaa
ggcgggaaaacgctggttgagtaccaggagctgacgggcgctcgcatccagatctccaaa
aagggagagttcatccccggcacgcggaaccgtaaagttaccataacagggtcacccgcg
gcaacgcaagccgcccagtatctgatcagccagaggatcacgtatgagcagggtgtgcgt
gccaccaacccacagaaggtgggctaa
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