Salvelinus fontinalis (brook trout): 129868205
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Entry
129868205 CDS
T11136
Name
(RefSeq) PDZ and LIM domain protein 4-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129868205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129868205
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
129868205
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Paralog
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
BNR_2
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129868205
NCBI-ProteinID:
XP_055797940
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Position
13:complement(18821246..18858997)
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AA seq
372 aa
AA seq
DB search
MPQTVTLKGPSPWGFRLVGGRDFSTPLTISRVTPDSKAAQGDLCPGDTILAINGDSTETM
THMEAQNRIKACMGELTLAVSRSEDKVWSPTVIEDGKTSPFMATLESESPQNFRPISTGP
ITGGYISGYSSGHNGSGYRKPSYISEPPHLNNGTSKQLNNMQYNNPAGLYAHNNGSNGDR
DRVLPKQMGSLSLSSPHSPEPPTHSPLGRNGNGPCFEVTTESDVYKMLQDPEEPVSAPKQ
SGSFKYLQGILEAEDGGVSPTDRSGVRSLRSPVQSPVPKLGSPIPGPMPGLQKLPQCTRC
GNGIVGTIVKARDKLYHIECFMCDDCGLNLKQRGYFFIEENLYCETHAMARVQPPEGYDV
VAVYPNSKVELV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaccgtgacactgaagggaccctcaccttggggttttcgactggtcggtgga
agggactttagtacaccgttaactatttcgagggtaacaccggacagtaaggcggcacag
ggggacctgtgtcctggggacaccatcctggccatcaatggcgacagcacagagaccatg
acacacatggaggcccagaacaggatcaaggcctgcatgggggagctcacactggccgtc
agcaggtctgaagacaaagtctggtctccaactgttattgaagatggcaagaccagtcca
ttcatggctacgttggagtctgagtccccacagaatttccgaccaatcagcactggacca
atcacaggtggatacatcagtggctacagcagcggtcacaatggcagtggatacagaaaa
ccctcctacatctccgagccgccgcacctcaacaacggcacctccaagcagctcaacaac
atgcagtacaacaacccagccggcctgtacgcacacaacaatggcagcaatggagacaga
gacagggtcttgccaaaacaaatgggcagcttgagcctgagctccccacacagccctgag
cctccgacccattctcctctgggacgtaatgggaacggtccttgttttgaagtcaccaca
gagtcagacgtgtacaagatgctgcaggacccagaggagccagtctctgcacctaaacag
tccggctccttcaaatacctacagggcatactggaggcagaggatggaggtgtgtccccc
actgacaggtctggagtgagaagcctaaggtccccagttcaatccccagtccctaaattg
ggcagccccattcctggccccatgcctggcctacagaaactcccccagtgcacgcgctgt
ggcaacggcatagtgggcaccatcgtgaaggccagagacaaactgtaccacatagagtgc
ttcatgtgtgacgactgcggcctgaacctcaagcagaggggctacttcttcatcgaggag
aacctgtactgtgagacccacgccatggcccgtgtccagcctcctgagggatatgacgtg
gttgcagtctaccccaactccaaggttgaactggtctga
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