Salvelinus fontinalis (brook trout): 129868449
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Entry
129868449 CDS
T11136
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129868449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfon03019
]
129868449
03036 Chromosome and associated proteins [BR:
sfon03036
]
129868449
Messenger RNA biogenesis [BR:
sfon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129868449
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129868449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129868449
NCBI-ProteinID:
XP_055798422
LinkDB
All DBs
Position
13:33233527..33262433
Genome browser
AA seq
1824 aa
AA seq
DB search
MFNKSFGAPFGGGTGGFGTSSTFGQQNTSFGAATGGFGASAFGATNNTGGLFGATQNKPV
VTANPQQIHTGAGRGGGLFGSSTFSQPVTSSTSSGFGFGVSSGTSTSLFGSTNTGGGGGL
FSQQSNAFGAAKPASFGTFGTSTASSGGLFGATNSNPFGGASTSLFGASGFTQQAAQPGT
TVKFNPPTGSDTMVKGGVTASINTKHQCITAMKEYENKSLEELRFEDYQAGRKGPTNPMA
APTGGIFGAAAAATPSTGATGLFGSSATNTGFSFGQAKTTFGTSAGGFGAATGSLFGQQQ
PQQAQQAVSLFKPFGQATTTPNTGFSFGNTSTMGQPQQTSTMGGLFGATAASQAGGLFGN
TAQTAPATGFGTGTGLFGQTNTAFGNVGTQQGLFGNKTAGFGVTTTSAPSFGTGTGLFGN
KPALTLGTATNTSNFGFGPTAAGGSLFGNKTAAGGLGTGLGASFGAVGTGQMSLFGNNKT
LGSTLGTMGGFGVQGFSTGNSTLGFGAPQQPVAVTDPNAVAAQQAVLQQQINALAYSPFG
DSPLFRNPLSDPKKEEERLKPTNPVAQKALTTPTHYKLTPRPATRVRPKALTSSGSSKSQ
LFDGLDDDEPSLTNGAFMPRKSIKKLVLKNLNGSSLYSSPLNRDSDDLSSPPEYPLNRLG
ASVDEDDDVREVVEGGAEDDLEIKFYAKPSLQDTISELNAHRMGAGGRNGLQVSSEDISL
GDDSIQEERVEEGPPHPAGIVLGRVGYYTIPAMEELAKMVDENGVCVVENFTVGRKGYGS
VFFHGEVNVTGLNLDEIVHFRRKEVIIYLDDKNKPPEGEGLNRRAEVTLDGVWPNDKTTC
TQIKSPERLSEMNYEGRLENASRKQGARFLEYRSETGSWVFEVAHFSKYGLQDSDEDKEV
PLKVDPKKLKTATRLPPGLQQLPPSQQQVAPQVQSTAVLELLNRVLEVDSDTADITQDAP
GESMLGEEEGESGIGEKGSRLGNVTPTEHDSVSAASQIASSLGINPHTLQIMKASLFAED
DDGDMFQEQGGMTSSLNVASPHIHLPGTQGRPSIGGLLQTRFSSAGLFFQLPDVPFGGGL
PGRLSMSRVSPAVPEPSRVSPWPSFLLPAPPAVATLRTVGARRLGGPVDPENSVTLGKGR
LLMDAALFTGRSFRVGWGPGWTLVHCGDGLSGAGDKEQDHGDTGATGFGFLPKPAKSRRL
SDSPFKVVIEQVVGLELRDSEESQAVYQRPLEISLKHSSISTEGACPFIQPQSGVAALHE
YAEWITDLNQEAGAGDAVLGQWAQVWTLCEALWGRWCSAVPGTSGYLQQMERRRSFSAWL
SHSATQWIEQEVGLNQGGGNAEAIFSYLTGHRISDACRLAQKSGEERGDWRGDRGDHRLS
LLLSQAVGSQYGRELLALQLGDWNRMQTDSFLPEERLRIFALLAGKPVWQSTDCEVNVCS
ELDWKRCMAVHLWYMLPPTASIAEALAKYEAAFQGSAEGQKYACAPLPPYLEQSHQPDME
EEESKQTLYDICFHLLKLYSDRHYSLQQLLDPLAVTWERLDYRLSWHLWSVLQALHYTHL
SPARQGLIHTSYAAQLESAGLWDMAIYVLLHIPDNTLREWAVREMLQLHCPLLETEESTK
KEHFLTERLLIPEQWLHQAKATRARRDTDRHREALHLYRAGHWNLCHSLVIQHLASDCII
NDNHEYLLEFLEGLAVPERSSVIQDWDTAGRVYLDYIGVIQTLHAIQQMDSTGYELEYLH
TEVTSLCSRIELLPCSTAKDRLAQSEMAKCVANILRVVLSLQQGGEIPLSQLASNIGRLP
MPEDYALEELRSLTQSYLRQLIVS
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcgtttggtgctccctttgggggagggactggaggatttgggacttca
tccacatttgggcaacaaaacactagctttggggcggcaacaggtggcttcggagcctca
gcgtttggggcgaccaacaacactggaggactctttggggcaacgcagaataaaccagtg
gtgacagccaatcctcagcaaatccacactggtgcaggtagaggaggtggcctttttggt
tccagtaccttcagccagcccgtgacgtcatccaccagtagcggctttggctttggcgtg
tccagcggcacctccaccagcctgttcggcagcaccaacacgggcggcggcggaggactc
ttctcccagcagagcaatgccttcggcgctgccaaaccagcctcatttggcacgttcggt
acgagcacggccagcagtggggggctgtttggggcgaccaactccaaccctttcggaggg
gcgtctacctccctgttcggagcatcagggtttacccagcaggctgcccagccaggcacc
actgtcaagttcaaccctccaacaggaagtgacaccatggtgaaagggggtgtgacggca
agcatcaacaccaagcaccagtgcatcacggccatgaaggagtatgagaacaaatcactg
gaggagctgaggtttgaggactaccaggcagggaggaagggacccactaaccctatggct
gcaccaacagggggtatctttggggctgcagccgcagccacccccagtacaggggctaca
gggctgtttggctcctcagccactaacacaggcttctcctttggccaggccaaaaccacc
ttcggaactagtgcgggtgggtttggtgcagccacaggcagtctgtttgggcagcagcag
ccccagcaggcccagcaggcagtcagcctgttcaagcccttcggccaggccacaaccacc
cccaacacaggcttctccttcggcaacaccagcaccatgggccagccccaacaaaccagc
accatggggggtctgtttggggccacggcagcatcccaggcaggggggttgtttggaaat
accgctcagaccgcaccagctacgggctttgggacaggcaccggactctttggacaaacc
aacaccgctttcggcaacgtcggcacacagcagggcttgtttggtaataaaacggcaggg
tttggtgtcaccactaccagcgccccgtcgtttggcacgggcaccggcctcttcggcaac
aaacctgccctcactctcggaacagctaccaacacatccaactttggttttggacccact
gctgctggcggaagcctttttgggaacaagacagcagcaggaggactagggaccgggctg
ggagccagctttggagcagtaggcactggccagatgtctctgtttgggaataacaagacg
ctgggttccactctgggaacaatgggaggttttggagtgcagggattcagcacaggaaac
agcactctaggcttcggagcgccacaacagcccgttgcggtgacggaccctaacgcggtg
gcggcccagcaggcagtgctgcagcagcagatcaatgctctggcttactcccccttcgga
gactcccccctcttcagaaaccccctctctgatcccaagaaggaggaggagcgtctgaag
cccaccaatccagtggcccagaaggcgttgaccacgccaactcactacaaactgacaccg
cgacctgcgacacgtgtgcggcccaaagctctgacatcatcgggctcttccaagtcccag
ctgtttgatgggttggatgatgacgagccttctctcaccaacggagccttcatgcccagg
aagagcatcaagaagctggtgctgaagaacctgaatggcagcagcctgtacagcagccca
ctcaacagagattccgacgacctgtcctctccaccagagtaccccctcaacagactcggt
gccagtgtggacgaggatgatgatgtgagggaggtggtggagggaggagccgaggacgac
ctggagatcaagttctacgccaagcccagcctgcaggacaccatctcagagctcaatgcc
cataggatgggggctgggggcaggaacgggctgcaggtgagcagcgaggacatatcgctg
ggagatgactccatacaggaggagcgagtggaggagggccccccccaccctgcaggtatc
gttctgggccgtgtgggctactacaccatccctgccatggaagagctggccaaaatggtg
gatgaaaacggagtgtgtgtggtggaaaacttcaccgtgggcagaaaaggttacggctcc
gtgttcttccatggtgaggtgaacgtgacggggctgaacctggatgagattgtccacttc
agacgtaaagaggtcatcatctacctcgacgacaagaacaagccccctgagggggagggg
ctcaacaggcgagcagaagtgactctggatggggtgtggcctaatgataagaccacctgt
actcaaataaagagccctgagcgtctgtctgagatgaactacgagggccgcctggagaac
gcctcacgcaaacagggcgcccgcttcctcgagtaccgctccgagacggggtcctgggtg
tttgaggtggctcatttctctaagtacggcctgcaggactctgacgaggataaggaagtc
cctctcaaagtggaccccaagaagctgaagacggcaacaagacttccaccagggctgcag
cagctgcctccctcccagcagcaggtggcgccacaggttcagtccacagcagtgctggag
ctgctgaatcgcgtattggaggtggacagtgatacggccgacattacccaggatgcccca
ggggagagcatgttgggggaggaggaaggggagagtggcataggggagaagggaagtcgg
ctggggaatgtgacccctacggaacacgactctgtctcagcggccagtcagatcgcctcc
tcgctggggatcaaccctcacacactacagattatgaaggcatcgctgtttgctgaggac
gatgatggtgatatgttccaggagcagggagggatgacaagttctctaaacgtggcctct
cctcacatccacctgcctggcacgcagggcaggccctccatcggtggtctcctgcagact
cgtttcagcagtgccggtctcttctttcagctccctgacgtgcccttcggtgggggcctt
cccggcaggctgtccatgtctcgggtgtcgccggcggtgcctgagccttcgcgggtctct
ccctggccctcttttcttttgcctgccccaccggccgtggccactctacggacagtaggg
gctcggcgcctggggggacctgtggacccagagaactcagtcacactggggaagggccgt
cttctgatggatgcggctttgttcacgggccggtcatttcgggtgggctggggtcctggc
tggactctggtccactgtggagacgggctaagtggggccggggacaaggagcaggaccac
ggagacacaggagctacaggctttggattcctgcccaaacctgccaagagtagacgactg
tcagacagtccattcaaggtggtgatcgagcaggtggttggtctggagctgcgggacagt
gaggagagccaagcggtgtaccagcggcccctggagatcagcctgaagcacagcagcatc
agtacagagggggcctgccccttcatccagccccagagcggtgtggccgccctgcacgag
tacgcagagtggattactgacctcaaccaggaggctggtgctggagatgcagtcttgggt
caatgggctcaggtgtggactctgtgtgaggccctgtggggccgatggtgttcagcagtg
cctggtaccagtggctacctgcagcagatggagaggagaaggagcttctcagcttggctg
tcccacagtgccacccagtggatcgagcaggaagtgggcctgaaccaggggggaggaaat
gcggaggccatctttagctacctgactggacacaggatcagtgatgcctgcaggctggct
cagaagagtggtgaggagaggggcgattggaggggtgacagaggggaccaccgtctctcc
ctgctgctgtcccaggcggtgggctctcagtatggccgggagctgctggcactgcagctt
ggagactggaacaggatgcagacagactctttcctgcctgaggagaggctacggatcttt
gcccttctcgctgggaaacctgtgtggcagtctacagactgtgaggtgaatgtgtgttca
gaactggactggaagcgttgtatggcggtccacctgtggtacatgctgcctcccaccgcc
tccattgctgaagccctggccaagtacgaggctgccttccagggctctgctgagggtcag
aagtatgcctgcgccccccttcccccctacctcgaacaatcacaccagccggacatggag
gaggaagagtctaaacagacgctttacgatatctgcttccacctgctcaaactctacagc
gacaggcactacagcctgcagcagttgttggaccccctggcggtgacgtgggagcgtctt
gactaccgtctgagctggcacctgtggtcggtcctgcaggcgctgcactacacacacctc
agccccgcccgacaaggcctcatacacacgagctatgctgcacagctggagagtgctggc
ctctgggacatggccatctacgtactgctgcacatacctgacaacacgctgcgtgagtgg
gcggtgagggagatgctgcagctgcactgccccctgctggagacggaggagtctaccaag
aaagagcactttctcacagagagactactgatcccagaacagtggctccaccaggccaaa
gctaccagagccagaagagacacagacagacacagagaggcccttcacctgtacagggca
ggacactggaacctctgccacagtctggtcatacagcaccttgcctcagattgcatcatt
aatgataaccatgagtacctcttggagttcctggaggggcttgcagttcctgagcgcagt
tctgtgatccaggactgggacacggctggcagagtctacctggactacatcggagtcata
cagaccctacacgccatacaacagatggacagtactggttacgagctggagtatctacac
actgaggtgacgtcactctgcagcaggatagagctcctcccttgctccaccgccaaggac
cgcctcgcccaatcagagatggccaagtgtgtggctaacatcctgcgtgtggtgttgagt
ctgcagcagggtggtgagatccccttgtcccagcttgcgtccaacatcggccgtctgccc
atgcccgaggactatgcactcgaggagctccgcagtctcacccaatcatatctgagacag
ctcattgtcagctaa
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