Salvelinus fontinalis (brook trout): 129868564
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Entry
129868564 CDS
T11136
Name
(RefSeq) nectin-3-like protein isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04514
Cell adhesion molecules
sfon04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
129868564
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129868564
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129868564
04090 CD molecules [BR:
sfon04090
]
129868564
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
Nectin family
129868564
CD molecules [BR:
sfon04090
]
Proteins
129868564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
ig
C2-set_2
Ig_2
I-set
DUF6022
Keratin_assoc
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
129868564
NCBI-ProteinID:
XP_055798636
LinkDB
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Position
13:36273981..36343894
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AA seq
570 aa
AA seq
DB search
MEDGSTFKMFLPCLRNYPLYKGQHAVFIVLLYILTGVGGSQVLVPQKVSAVLGKNVTLGC
SVEVGANLSLTQSSWERRLPTGSVTVAVYNPVFGISIPPNYVRRLSFRSPSSHDATIVLE
DVGFEDIGVYTCKVATFPLGNTQASTTVSVLVEPRVYVSAGSVALIDEGNETVVATCIAE
RARPPAEVSWETDLFGQSEVSLQDEANGTTSTQVRYLWQPTRHVQGHALTCVVRHPALHT
DFRIPYQLNVQYAPDIVVVGYDGDWYVGRENIQLTCKANANPPAHHFTWIRLDGKMPEGV
EIVNNTLLFLRPLQRNDSGVYRCEVANDINLRSRDLRIRVQDPPTTSMPSTTPAPVLTGS
ASSSTSVEEKRRVLFTSPTLAALPPDNHLGTIVGGAVGGALFLLLLLVVGGVCYLRQRQT
FRGDYYTKQYLGPSDMQKAPPQHKLQPTKPANNVYLDKDREEWGDRERNHVRDRERLHMH
PTSTTIINNHREPEYQPNGLTRAMRNGDHHDHLRSYPSPHQTGHARYAAPSHPLSTGSPY
LSDDCYDSGAEGDYVSHMDGSVISRREWYV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggctctactttcaaaatgttcctgccttgcctaaggaattacccgctttac
aaaggacagcatgctgtatttattgttcttctgtacatcttgacaggtgtggggggcagt
caggtgttggttccccagaaggtgagtgctgtattggggaagaatgtgacgttgggctgt
agcgtggaggtgggggccaacctcagtcttacccagagttcctgggagcgccggctcccc
acaggctcggtgactgtggcggtgtacaatcccgtgtttggcatctcgatccccccaaac
tatgtgcgccgcctgtccttccgctctccctcctcccatgacgccaccatcgtactggag
gatgtgggctttgaggacattggagtgtacacctgcaaggtggccaccttccccctgggc
aacacacaggcctccaccactgtcagcgtgctcgtggagcccagggtgtatgtgtcggct
ggctcggtggctctgatcgacgagggcaatgaaacagtggtggcaacctgcatcgctgag
cgggcccggccccccgccgaagtctcctgggagacggacctgtttggccaatcagaggtg
tcgctgcaggacgaggcaaacggcacgaccagcacccaggtacgctacctgtggcagccc
acccgccacgtccagggtcacgccctcacctgtgtggtgcgccatcctgccctgcacaca
gacttcaggatcccctaccagctcaacgtgcagtacgccccagacatcgtggtggtaggt
tatgacggtgactggtatgtgggccgtgagaacatccaactgacctgcaaagccaacgca
aacccaccagcacaccacttcacatggatcagactggacgggaaaatgccagagggggtg
gagatagtgaacaacacgttgctgtttctgaggcccctccaacggaatgactctggagtc
tacaggtgtgaggttgccaatgacatcaacctacgcagcagggacctgcggatacgcgta
caagatcctcccaccacctccatgccctccaccacccctgcgcctgtcctaaccggctct
gcctcctcatccacctctgtggaagaaaagcgacgggtcctcttcacctcccccaccctg
gcagccctgccccccgacaaccacctgggtaccatcgtgggcggggctgtgggcggagcc
ttgttcctcctgctgctgctggtagtgggcggggtatgttacctacgacaacggcagacc
ttccgcggggactactacactaagcagtacctagggccttcagacatgcagaaggctcct
ccacagcacaagctccaacccactaagcctgccaataacgtctacctagacaaggaccgc
gaagagtggggcgaccgcgaacgcaaccacgtgcgggaccgtgaacgcctccacatgcat
ccaacatcaacaaccatcataaacaaccacagagaaccggagtaccagcccaacggccta
acgagggcgatgaggaatggagaccaccatgaccacctgcgtagctaccccagcccccac
caaacaggccatgctagatacgctgccccgtcacacccactgagcactggctccccctac
ctgtcggatgactgctatgacagcggggctgagggggactatgtctcccatatggatggc
tcagtgatctcacgcagggagtggtacgtctga
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