Salvelinus fontinalis (brook trout): 129868578
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Entry
129868578 CDS
T11136
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129868578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129868578
03036 Chromosome and associated proteins [BR:
sfon03036
]
129868578
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
129868578
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
129868578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ATRX_C
ADD_ATRX
Helicase_C
C5HCH
Motif
Other DBs
NCBI-GeneID:
129868578
NCBI-ProteinID:
XP_055798659
LinkDB
All DBs
Position
13:complement(36497790..36555304)
Genome browser
AA seq
1972 aa
AA seq
DB search
MSTEMLSIPLGTSKLNVLVTKLHGFLAHAPEEDDDTLVTESPEGITNKDCVEPHSTDRTS
IETSTDALKQSRCGSRRKPSVVIKHSGLDVSGASNESDDDCLIVNSNGYPDVTRLPKGTA
LVRPEPVENVRDDFRGTEFLCGKSGNLKRVFSRRRGGGEHLEIVSCTACGQQVNHFQRDS
FNQHPVLKVLICKSCFKYYSSDDISKDCDGMDEQCRWCAEGGNLICCDFCPNAFCKKCIL
RNLGRKELSGILDEESKWYCYVCSPEPLLDLVVACDNVLDNLGSLWQDHRKRGRGDGKSG
HCDSHPRHSQNIPTGHWKHSGIDGHVVFNYNTLQIPEEMAKKAKKLVDSTNTVNTTFVKF
IQGGMDFKRQYLKTFQSVLKGLKKSHTALEEALWEEFKEIGLPNDGGNPTFDTDAPQQAQ
EGCVEMDIVDKNCLHFLKKIAAEHLEDNYSDSKGFTDDERPSSSSEMKGVLGTEIMPRRG
RGRPRKNSKPGEDPSNMTKQLVVQLTPVPVEKQPPSGPPELEVELEEKKELEEEIKEKVD
ERKGGCESIEPATEGEYESAEEGNESLVLELEDEPENRRSPRVKTTPLRRPGEGKTKSTP
SGADSEGDSDPDTSPNVELPQGADEEGLGRGIEDSDSDEVPAVLQRAAMAHSSDEARSDD
GDLRSVTKKCLFGLKKNTPLSPERVVRKRKVQERSSDSDSSSDNPDLQKEIKTMSRPRGR
PRKVKREDEPTPSKDSPQHRPPGRPQKVKKENESAFSKEGYTQVTKPKSTPRSQQGTKQS
PSSSSQEEGDQDSESSDDSGDQKIKPITEEVALLGSAAFHQSSGDEEQTRSGPSWEAEDD
DDPENRIAKKMLLAQIKANYSSGEDFSSDEESSQDDESDREEKAQEDGKDESSDENGQTS
SLTSDSGSSKTRHRHCLLRHKLSLDDGNPSDQKTAEENGNEQKVKKSRRTEGETLESQSS
DDSLSEQEESGMSEELSQSENEGNEQKPKSSSTSRVERESVRSYLQKKQQPSYIVLSDSS
VDKSEDDEKDGEEGDNKGTPKGRKKIRRIIIDEHLRSETQRALKEEEDRCRRLAEREQRE
DFREVIVIDDEVSQVACPITTKLVLDQDEGTREPLIQVHRNLVTRLKPHQVDGVQFIWDC
CCESVKKANSTPGSGCLLAHCMGLGKTLQVVTFLHTMLQSKCLNFRTALVVCPLNTILNW
VNEFDKWQVNMGADKVKVTELATLKRPQERYIALQKWQKDGGVMIMGYEMYRNLTLGLKV
THRQFKKTFNSTLVDPGPDFVICDEGHILKNEASNISKAMSAIKTKRRVVLTGTPLQNNL
NEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTPRDVRIMKNRAHVLHAMLAGCV
QRRDYSALTKFLPPKHEYVMAVRVTPLQYRLYRYYLDNFTGARSVVEGARGKTGTSLFKD
FQILSRIWTHPWCLQLNYISKENKGHFDGKHQGKAESKEKENKGKLRNADEKINDMEVIM
VWNSSSKSVNVEGDQRAGPLVTVVDAVKASTSFRPDSPAADWYKDMLSDSDATILGHSGK
MVLLFEILRMAEELDDKLLVFSQSLISLDMIEDFLDLANKAKDNGQSSLYKGDGSWIRNI
DYYRIDGSTSATSRKKWAEEFNDATNERGRLFLISTRAGSLGINLVAANRVIIFDASWNP
SYDIQSIFRVYRFGQLKAVFVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIQRHFTL
FELTELYMFGPDLLDDPNSEKKSKRITPLLPKDMVLAELLQICKEQIVRYHEHESLLDHK
EEEELSEADRKAAWAEYEAEGAFFLNKPAHTSTNVPSPSTSRMANSLLSLYKKTNEQLKN
MINASRDEVSEAIKSLHSLKNLSVDDYVLRLWHDNPSLDEKQVKVLAQTWKTSNDKERER
RRALYHDLLSKQQSLTMCIQTILTSRKIEVTQTATVTNQTPALTDSVKKPMQ
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atgtccacagagatgctcagcattcctcttggcacgagcaagctcaatgtgttggtgacc
aaactgcatgggttcttggctcatgctccagaggaagatgacgacacactggtgactgaa
agtcctgaaggtataacgaacaaggactgtgtggagccacactcaacagaccgaacctcc
attgagacctcaacagacgccttgaagcagtccagatgtggttccaggagaaaaccttcc
gttgtgattaaacacagtggactggatgtatctggtgcttcaaatgaaagtgatgatgac
tgcttgatcgtcaattcaaacggttatcctgatgtaacaagattgcctaaagggactgca
ctggtgaggcctgagccggtagaaaatgtcagagatgacttccgaggtacagaattcctt
tgtggaaaatctggtaatctgaagagagttttttccaggagacgtggaggaggtgaacac
ttggagattgttagctgtacagcctgtggccagcaagttaaccacttccagagggactcc
ttcaatcagcatccggtactcaaagtacttatttgcaagtcttgtttcaagtattactca
agtgatgacatcagcaaggattgtgatggcatggacgaacagtgcagatggtgtgcagag
gggggaaacctgatctgctgcgacttttgccccaacgccttctgtaagaaatgcattttg
cgtaatctggggcgaaaggagctgtctggcatcctagatgaggagagtaagtggtactgc
tacgtatgcagcccagagcctcttctggacctggtcgtcgcctgtgacaacgttcttgac
aacctggggagtttgtggcaagaccaccgcaagaggggcagaggtgatggcaaatctgga
cattgtgactcccatcccaggcattctcaaaacattcccacgggtcattggaaacatagt
ggcatagatgggcatgtggtattcaactacaacacccttcaaattccagaagagatggcc
aaaaaggcaaaaaaacttgtggactctacgaacactgtaaacacaactttcgtgaagttc
attcaaggtggaatggattttaagcgacaatacttgaagactttccagtcagtactgaag
ggtctaaagaagtcccacacagctctggaggaagccctttgggaggagttcaaagagatt
ggtctgccaaatgatgggggaaaccccacttttgatactgatgcacctcaacaagcacaa
gagggttgtgtggaaatggacattgttgataaaaattgcctgcatttcttaaagaaaatt
gcagctgaacatttggaagataattattcagactctaagggctttacggatgatgaaagg
ccttcgtcctcaagtgaaatgaaaggtgtccttggcacagagataatgccccgtcgaggt
agaggcaggccacggaaaaactctaaacccggagaagatccttccaacatgacaaaacaa
ctggtggtgcaacttacacctgtccctgttgaaaaacagccaccctctggccccccagag
ttggaggtggagttggaggagaaaaaggagttggaggaagaaataaaagaaaaagtggat
gaacgtaagggaggctgtgaatctattgaacctgcaacagaaggggagtatgaatctgct
gaggagggaaacgaatctctggtgctggaactggaagatgaaccagagaatagacgctca
cctcgggtaaagaccacgcccttacgcaggccaggtgagggcaagaccaagtctaccccc
tcaggcgctgacagtgagggtgactctgaccctgacaccagccccaatgttgaactacct
caaggagctgatgaggaagggcttggaagaggaattgaagactcggactccgatgaggtc
cctgctgtccttcagcgggcagccatggctcacagttcagatgaagccaggagtgacgat
ggagaccttcggagcgtgaccaagaaatgcctcttcggcctgaagaagaacactcccctc
tctccagaaagagtggtccgcaaacgcaaggtgcaagagcgctcctctgactccgactcc
tccagtgacaatccagacctgcagaaggagatcaaaactatgagcaggcccagggggagg
cctcggaaggttaagagagaggatgaacctacccccagcaaggatagtccacaacatagg
cccccgggcagacctcagaaggtcaagaaagagaatgaatccgcattcagcaaggagggt
tatacccaggtaaccaagcctaaaagcacacctcggtcccagcagggaacaaagcagtcg
ccatcctcttccagtcaagaagagggagaccaggattctgagtctagcgatgacagtggt
gaccagaagattaagcctatcactgaggaggttgccttactggggtcagcagctttccac
cagtcgtctggcgatgaagagcagacccggtctgggccttcttgggaagcagaagatgat
gacgatccagaaaatagaatcgctaagaaaatgctcttggcccaaatcaaagccaactac
tcatcgggggaggatttctcttcagacgaggagtcatcacaggatgatgaatctgacaga
gaagagaaggcgcaggaagatgggaaagatgaaagctcagatgagaatgggcagacctcc
agtttgacctctgactctgggtccagtaaaactcgtcacagacactgtctgctacgccac
aagctcagccttgacgatggaaatccaagtgatcagaaaacagctgaagaaaatgggaac
gagcagaaagtcaagaagtctagaagaaccgaaggtgagacattggagagccagagtagt
gatgatagcctatcagagcaggaagagtctggtatgagtgaagagctgagccaatctgag
aatgagggcaatgaacagaagcccaaaagctcatctacctctagagtcgagagagaatca
gtccgtagttatctacagaagaagcagcaaccctcatatattgtgctgtctgactccagc
gtcgataagagtgaagatgacgagaaggacggagaggaaggtgacaacaaaggtacacct
aagggccgcaagaagatccgcagaatcatcatagatgagcacctccgctcagagacccag
agagccctgaaggaggaggaggatagatgcagacgccttgcagaaagagagcagagggag
gacttcagagaggtgattgttattgacgatgaggtgtctcaagtggcctgtccaatcacc
actaagctggtcttggatcaggatgaggggaccagggagccactcattcaggtgcacagg
aacctggtgaccaggctcaagcctcaccaggtggatggtgtgcagtttatctgggactgt
tgttgtgagtcagtgaagaaggccaattccacccctggatcaggttgcttactggcccac
tgcatgggcctagggaagacactgcaggtggtgacattcctccacacaatgctgcagtca
aagtgcctgaacttcaggactgccttggtggtgtgtccactcaacactatccttaactgg
gtcaacgagtttgacaagtggcaagttaacatgggagctgacaaagtcaaggtgacagag
ttggcaacattgaagcgacctcaggagcgttatattgcgctgcagaaatggcagaaggat
ggtggtgttatgatcatgggctatgagatgtaccgcaacctcacactaggcctcaaagtc
acccacagacaattcaaaaagacctttaacagcacactggtcgatccaggtccagacttt
gtgatctgtgatgaggggcacatccttaagaacgaggcgtccaacatctccaaagctatg
agtgccattaagaccaaacggagagtggtgctgacaggcacgccactgcagaacaacctc
aatgagtaccactgcatggtgaacttcatcaaggagaaccttctgggctcaatcaaggag
ttccggaatcggtttatcaaccccattcagaatggccagtgtgcagactccacccccaga
gatgtccgcatcatgaagaatcgcgcccatgtccttcatgcaatgttggcgggatgtgta
cagaggagagactactcagccttgaccaagttcctgccccctaaacatgagtatgttatg
gcggttagggtgacccccctccagtacagactgtatcgctactacctggacaacttcact
ggagcaagatccgtagttgagggagccaggggcaagactggaaccagcctctttaaggac
ttccagatactcagccgaatctggacgcatccctggtgtctgcagctcaactatatcagt
aaagaaaataagggccattttgatggaaagcaccaggggaaagcggagagtaaagagaag
gagaacaagggaaaattgcgtaatgctgatgaaaaaatcaatgatatggaagtgatcatg
gtgtggaacagctcatcaaagagtgtcaatgtggaaggagaccagcgagcaggtccactg
gttacagtggtagatgcggtgaaagcgtccaccagtttcaggcctgacagtccggctgca
gactggtacaaggatatgctgagtgattcagacgccaccatcctgggacactcagggaag
atggtgctgctgtttgagattctccgaatggcagaggaactggacgacaaactgttggtg
ttcagtcaatccttgatctcattagacatgattgaagatttcttggacctcgctaacaaa
gccaaagacaacggacaatcatccctatacaaaggtgatggcagctggatcagaaacatt
gactattaccgtattgatgggtccaccagtgccacatccaggaagaaatgggctgaagag
ttcaatgatgccaccaatgagcgaggtcgtctgtttctcatctcgacaagagctgggtcc
cttgggatcaacctggtagcagctaacagggtcataatttttgacgcttcgtggaacccc
tcctatgacatccagagcatcttcagggtgtaccgttttggccagctgaaggcagtgttt
gtctaccgcttcttggcacagggtaccatggaggagaagatctacgaccggcaggtggcc
aagcaatctctatcgttccgggtggtggaccagcagcagatacagagacacttcactctg
tttgaactgacagagctttacatgtttgggccagacctgctggatgaccccaactctgag
aagaagagcaagaggatcacacccctgctgcccaaggacatggtcctggcagagctgctg
cagatctgtaaggagcagattgtccgctaccatgaacatgagtccctgctagaccacaaa
gaggaggaggagctcagtgaggccgaccgcaaagctgcctgggctgagtacgaggcagag
ggtgcattcttcttgaacaagccagcacacaccagcaccaacgttcccagcccctccacc
tctcgtatggccaacagtctgttatccctgtacaagaagactaatgagcagctgaagaac
atgattaatgccagccgtgacgaggtcagcgaggctatcaagtccctgcattccttaaag
aacctctccgtggatgactatgtgttgcgcttgtggcacgataacccaagtctagatgag
aagcaggtgaaagtcctggcccagacctggaaaaccagcaatgacaaggagcgggagcga
agacgggccttatatcatgaccttctctcaaaacaacaatcacttacaatgtgcatccag
accattttgaccagtagaaaaattgaagtgacacagactgccactgtcaccaatcagaca
ccagccttgacagactccgttaagaaacccatgcagtga
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